Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0185 CAGCTTCATGTTCTGGCCGTGGATGATAGCCTCGTCGATCGGATGGTCATCGAGAGGTTGCTCAAGATCTCCTCCTGTAAAGTGACGGCTGTGGAGAGTGGGAGAAGTGCTCTGCAGTATCTGGGTCTTGAAGGCCAAACCAATTCTGTCCACTTCAATGGTTTGGAGGTGAATCTCATCATCACTGACTACTCCATGCCCGAAATGACAGGTTATGAACTTCTCAAGAGGATCAAGGAATCATCAGCTTTTAGAGAGATTCCTGTTGTCATAATGTCATCAGAGAACATCTTGACTAGAATCGACAGTTGCTTGAAGGAAGGGGCTGAAGAATTCTTAGTGAAGCCTGTGAAACTCTCTGATGTGAAACGATTGAAAGACTTCATCATGAAAGGAGAAAATGGAGAGAAGAGAATTGGTCTCAAGAGGAAGCTTGATCTTGATCATGATCATGATCATGACCAACACCCCTTATCGGCTCCGGCGCCGGAGGCTTTCGATTGCCAAGGATTTCTGCAACCATCGCCGCCGTTGTCTCGGGCATCGCCGATCAGATGTTCATCGAAGAAACCCAGATTACTCACTGGCGACCAATCCATATAA 603 46.93 QLHVLAVDDSLVDRMVIERLLKISSCKVTAVESGRSALQYLGLEGQTNSVHFNGLEVNLIITDYSMPEMTGYELLKRIKESSAFREIPVVIMSSENILTRIDSCLKEGAEEFLVKPVKLSDVKRLKDFIMKGENGEKRIGLKRKLDLDHDHDHDQHPLSAPAPEAFDCQGFLQPSPPLSRASPIRCSSKKPRLLTGDQSI 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1237275 1238770 + MC06g0154 Mch6g0185 689632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0185 200 Pfam Response regulator receiver domain 4 122 IPR001789 GO:0000160(InterPro)
Mch6g0185 200 SUPERFAMILY CheY-like 2 125 IPR011006 -
Mch6g0185 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 153 IPR045279 GO:0009736(InterPro)
Mch6g0185 200 MobiDBLite consensus disorder prediction 175 200 - -
Mch6g0185 200 CDD REC_typeA_ARR 4 125 - -
Mch6g0185 200 Gene3D - 2 171 - -
Mch6g0185 200 ProSiteProfiles Response regulatory domain profile. 3 130 IPR001789 GO:0000160(InterPro)
Mch6g0185 200 SMART REC_2 2 126 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0185 Mch-Chr6:1237275 Mch9g1736 Mch-Chr9:19355098 3.94E-42 dispersed
Mch9g1380 Mch-Chr9:16186608 Mch6g0185 Mch-Chr6:1237275 1.12E-47 transposed
Mch6g0185 Mch-Chr6:1237275 Mch9g2202 Mch-Chr9:22574997 2.46E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43490 PF00072 Response_reg 5.30E-21 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0185 K14492 - csv:101214143 271.552