Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0185 | CAGCTTCATGTTCTGGCCGTGGATGATAGCCTCGTCGATCGGATGGTCATCGAGAGGTTGCTCAAGATCTCCTCCTGTAAAGTGACGGCTGTGGAGAGTGGGAGAAGTGCTCTGCAGTATCTGGGTCTTGAAGGCCAAACCAATTCTGTCCACTTCAATGGTTTGGAGGTGAATCTCATCATCACTGACTACTCCATGCCCGAAATGACAGGTTATGAACTTCTCAAGAGGATCAAGGAATCATCAGCTTTTAGAGAGATTCCTGTTGTCATAATGTCATCAGAGAACATCTTGACTAGAATCGACAGTTGCTTGAAGGAAGGGGCTGAAGAATTCTTAGTGAAGCCTGTGAAACTCTCTGATGTGAAACGATTGAAAGACTTCATCATGAAAGGAGAAAATGGAGAGAAGAGAATTGGTCTCAAGAGGAAGCTTGATCTTGATCATGATCATGATCATGACCAACACCCCTTATCGGCTCCGGCGCCGGAGGCTTTCGATTGCCAAGGATTTCTGCAACCATCGCCGCCGTTGTCTCGGGCATCGCCGATCAGATGTTCATCGAAGAAACCCAGATTACTCACTGGCGACCAATCCATATAA | 603 | 46.93 | QLHVLAVDDSLVDRMVIERLLKISSCKVTAVESGRSALQYLGLEGQTNSVHFNGLEVNLIITDYSMPEMTGYELLKRIKESSAFREIPVVIMSSENILTRIDSCLKEGAEEFLVKPVKLSDVKRLKDFIMKGENGEKRIGLKRKLDLDHDHDHDQHPLSAPAPEAFDCQGFLQPSPPLSRASPIRCSSKKPRLLTGDQSI | 200 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1237275 | 1238770 | + | MC06g0154 | Mch6g0185 | 689632 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0185 | 200 | Pfam | Response regulator receiver domain | 4 | 122 | IPR001789 | GO:0000160(InterPro) | |
Mch6g0185 | 200 | SUPERFAMILY | CheY-like | 2 | 125 | IPR011006 | - | |
Mch6g0185 | 200 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 2 | 153 | IPR045279 | GO:0009736(InterPro) | |
Mch6g0185 | 200 | MobiDBLite | consensus disorder prediction | 175 | 200 | - | - | |
Mch6g0185 | 200 | CDD | REC_typeA_ARR | 4 | 125 | - | - | |
Mch6g0185 | 200 | Gene3D | - | 2 | 171 | - | - | |
Mch6g0185 | 200 | ProSiteProfiles | Response regulatory domain profile. | 3 | 130 | IPR001789 | GO:0000160(InterPro) | |
Mch6g0185 | 200 | SMART | REC_2 | 2 | 126 | IPR001789 | GO:0000160(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0185 | Mch-Chr6:1237275 | Mch9g1736 | Mch-Chr9:19355098 | 3.94E-42 | dispersed | |
Mch9g1380 | Mch-Chr9:16186608 | Mch6g0185 | Mch-Chr6:1237275 | 1.12E-47 | transposed | |
Mch6g0185 | Mch-Chr6:1237275 | Mch9g2202 | Mch-Chr9:22574997 | 2.46E-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43490 | PF00072 | Response_reg | 5.30E-21 | CL0304 | Mch | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g0185 | K14492 | - | csv:101214143 | 271.552 |