Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0191 ATGGTGTCCGCATCGGCTCGTAATAAGACCATGCACTCCCTCCTCGCGGCTAATCTCGCGAAGCTGACCATCCCCTCGTCTTCTTCTTCCCCTTCTCCGTCAACCGCCGCCGCCGCCGCCATCCATGACTTTGATTTCTCCGACGTGTTTGGCCCCACCAATCCCTCCCCATCATCATCTACCAGTTTTCCGGGGGACCCACAGCACCACGAACAGCCCGAGGTCATCCACAACAGATCTCACTCATTTGTGGGTCCGTCTCCCCGCTTGACTCCCCCCTCTTCCCTTCCTTTTTTCCAAGGAATCGATTCTCAGAGCGATGAAGAGGAAGATGAAGAGGATTCAGAGATTTCAACTAGCAATGGAGCTCAAGAGGAAAAGGGAGTGGGTGAGAGTGTGAACGGTGGTGGAGAAAATGTACAGGGGAAGATTGGAGTTGGGGATTTTGATATTCTTCGAGTGGTGGGAAAAGGGGCATTTGGGAAGGTCTTTCTGGTGAGGAAGAAAGGAGATCTTAAAGGAAACGGTCCCAATAATGATGGGATTTATGCTATGAAAGTGATGAGGAAGGACACCATTATAAAGAAGAATCATGTGGACTATATGAAGGCTGAGAGAGATATTCTCACCAAAGTTGCGCATCCTTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAAATCAAAACTCTATTTGATTCTTGATTTCATAAATGGGGGACATCTCTTCTATCATCTGTACCGTCAGGGGATCTTCAGTGAGGATCAGGCAAGGGTCTATGCTGCTGAGATCGTATCGGCTGTTTCGCATCTTCACGGCTGCGGCATTGTGCATCGGGATCTCAAGCCTGAGAATATTCTCATGGATGCTGATGGGCATGTAGTGCTTACAGATTTTGGACTGGCCAAGGAAATTGAGGAATCAAGTCGGTCAAATTCGTTGTGCGGAACAACTGAATACATGGCTCCTGAAATCTTGCTTTCTAAAGGCCACAACAAAGATGCCGATTGGTGGAGCGTTGGAGTTCTCTTGTATGAGATGCTTAGTGGCCAGCCACCATTCACGCATGCTAATAGAAAGAAACTTCAAGAAAGAATAATTAAAGAGAAAGTGAAGCTTCCACCATGCCTGAGTACTGAAGCTCACTCTTTGCTAAGAGGGCTGTTACAGAAGGAGCCTTCTAAAAGATTAGGGAGTGGACCCAACGGAGGGGACGAGATTAAAAAGCATAAATGGTTTCGACCAGTCAACTGGAAGAAACTGGAATGTAGAGAGCTGCAACCAAAATTCAAGCCAGATGTGAATGGAAATGACTGCACAGCGAATTTCGATCATTGTTGGACAACAATGCCCCCAGACGACTCGCCAGCTCCAACACCAACCGACGGTGGACACTTCCATGGATATACTTATGTTGCTCCTAACCCTTGGCTTTCATCGTCTGGATAG 1449 47.69 MVSASARNKTMHSLLAANLAKLTIPSSSSSPSPSTAAAAAIHDFDFSDVFGPTNPSPSSSTSFPGDPQHHEQPEVIHNRSHSFVGPSPRLTPPSSLPFFQGIDSQSDEEEDEEDSEISTSNGAQEEKGVGESVNGGGENVQGKIGVGDFDILRVVGKGAFGKVFLVRKKGDLKGNGPNNDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQTKSKLYLILDFINGGHLFYHLYRQGIFSEDQARVYAAEIVSAVSHLHGCGIVHRDLKPENILMDADGHVVLTDFGLAKEIEESSRSNSLCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLSGQPPFTHANRKKLQERIIKEKVKLPPCLSTEAHSLLRGLLQKEPSKRLGSGPNGGDEIKKHKWFRPVNWKKLECRELQPKFKPDVNGNDCTANFDHCWTTMPPDDSPAPTPTDGGHFHGYTYVAPNPWLSSSG 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1276298 1279411 - MC06g0159 Mch6g0191 689638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0191 482 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0191 482 ProSiteProfiles AGC-kinase C-terminal domain profile. 414 481 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0191 482 PANTHER RIBOSOMAL PROTEIN S6 KINASE 107 475 - -
Mch6g0191 482 MobiDBLite consensus disorder prediction 51 67 - -
Mch6g0191 482 ProSitePatterns Protein kinases ATP-binding region signature. 155 186 IPR017441 GO:0005524(InterPro)
Mch6g0191 482 SMART serkin_6 149 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0191 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0191 482 Gene3D Transferase(Phosphotransferase) domain 1 237 432 - -
Mch6g0191 482 ProSiteProfiles Protein kinase domain profile. 149 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0191 482 FunFam Non-specific serine/threonine protein kinase 237 432 - -
Mch6g0191 482 Gene3D Phosphorylase Kinase; domain 1 148 455 - -
Mch6g0191 482 MobiDBLite consensus disorder prediction 46 140 - -
Mch6g0191 482 SUPERFAMILY Protein kinase-like (PK-like) 146 471 IPR011009 -
Mch6g0191 482 FunFam Non-specific serine/threonine protein kinase 146 260 - -
Mch6g0191 482 MobiDBLite consensus disorder prediction 104 119 - -
Mch6g0191 482 SMART pkinase_C_6 414 473 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0191 482 Pfam Protein kinase C terminal domain 434 471 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0331 Mch-Chr5:2250620 Mch6g0191 Mch-Chr6:1276298 5.04E-48 dispersed
Mch5g2014 Mch-Chr5:19778079 Mch6g0191 Mch-Chr6:1276298 7.13E-163 dispersed
Mch6g0191 Mch-Chr6:1276298 Mch6g0941 Mch-Chr6:6647365 1.03E-59 dispersed
Mch6g0191 Mch-Chr6:1276298 Mch4g0368 Mch-Chr4:2323977 3.21E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77455 PF00069 Pkinase 8.00E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0191 K04688 - csv:101214867 804.668