Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0200 ATGGAGACGCCCAGATTAAACAACAAATGGGTATCAACAGTTGCTAGCGTATGGATTCAATGCACCAGTGGGTCTCTCTACACCTTCTCCATCTACTCGCAAACCCTCAAGTCCACTCAGCGCTACGATCAGTCCACTTTGGACATTGTTTCTGTTTTCAAGGACATCGGTGTCAATTGCGGCGTCCTTTCAGGCTTTCTCTACTACTACGCCGCCGCTGATGGCGGTCGTCGTGGACCGTGGATTGTCCACTTGGCCGGTGCAATTCAGTGCTTCTTGGGTTATTTCCTTATCTGGGCTGCCGTTGCTGGGCTCTTCCCTCGGCCGCCGGTTCCCGCTATGTGCCTTTTCATGTTGGTGGCTGCTCATGCTCAGAGCTTCTTCAACACGGGTAACGTTGTCACTGGCGTTCGTAATTTTCCCAGTTATAGTGGGACGATTGTCGGAATCATGAAGGGGTTTCTTGGTTTGAGTGGAGCAATATTGATTCAAGTATACGAGACTATATTTGATGAACAGCCTACTTCGTTTATTCTGATGTTGGCACTGCTACCCACCCTTAATTCCTTATTGTTCATGTGGTTTGTGAGAATTCACAATACAAATGATGGAATTGAGAAAGAGCATCTCAATACCCTATCCATAATCACTCTGCTAGTTGCTATTTACCTTATGTTCAAGATAGTTCTAGAGCATATTTTCACCTTCCAATTCCCTCTACACGTTGCTGCATTTGTTCTACTTTTGATGTTGCTTGCATCTCCTCTATATATTGCAATCAGAGCCCAGCAGACAGAATCCACTAATATTTTGCTCTCTTCTCTTACCGAGAGTGACCAACTGATTGGTCACTCCAATCAAGCGATCATGGATTTTGACAATGAATGGCCAAGGGAATCTGAAGAAAACCTTAACCTCTTGCAAGCTTTATACACCATAGACTTTTGGATTTTGTTTTTTGCAACGGCTTGCGGCATGGGAACAGGATTAGCTACAGTGAATAATATCAGCCAGATAGGATTATCTCTTGGTTACACAAGCTTGGAGATAAGTACTTTGGTTTCATTGTGGAGCATCTGGAACTTTTTTGGTCGTTTTGGAGCTGGATATGTATCAGATTATTTTCTACATGCAAGAGGATGGGCTAGGCCGTTATTCATGTTCCTCACTCTGACAATCATGAGCATTGGACATGTAGTGATTGCTTCTGGCCTGCCAGGTGCTCTTTTTGCTGGTTCGGTGATAGTGGGTGTTTGTTATGGTTCTCAGTGGTCACTAATGCCAACAATTACTTCTGAAATATTTGGTGTTGTACACATGGGTACTATATTCAATGCTATTACAATAGCGAGCCCTATTGGATCTTATTTATTTTCAGTTAGAGTTGTTGGGTATATATATGACAAGGAAGCATCAGGTGAAGGAGACACTTGTACTGGAACAAACTGCTTCATGTTATCATTTCTGATTATGGCTCTTGCCACCCTTCTGGGCTCTTGGGCAGCCCTCGGATTATTTTTCTGGAGAAGAAGTTTCTACGATCAAGTGGTTTTTAGAAGGCTGCAACATTCTTCAAGTGGATAA 1584 43.37 METPRLNNKWVSTVASVWIQCTSGSLYTFSIYSQTLKSTQRYDQSTLDIVSVFKDIGVNCGVLSGFLYYYAAADGGRRGPWIVHLAGAIQCFLGYFLIWAAVAGLFPRPPVPAMCLFMLVAAHAQSFFNTGNVVTGVRNFPSYSGTIVGIMKGFLGLSGAILIQVYETIFDEQPTSFILMLALLPTLNSLLFMWFVRIHNTNDGIEKEHLNTLSIITLLVAIYLMFKIVLEHIFTFQFPLHVAAFVLLLMLLASPLYIAIRAQQTESTNILLSSLTESDQLIGHSNQAIMDFDNEWPRESEENLNLLQALYTIDFWILFFATACGMGTGLATVNNISQIGLSLGYTSLEISTLVSLWSIWNFFGRFGAGYVSDYFLHARGWARPLFMFLTLTIMSIGHVVIASGLPGALFAGSVIVGVCYGSQWSLMPTITSEIFGVVHMGTIFNAITIASPIGSYLFSVRVVGYIYDKEASGEGDTCTGTNCFMLSFLIMALATLLGSWAALGLFFWRRSFYDQVVFRRLQHSSSG 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1333315 1339776 - MC06g0168 Mch6g0200 689647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0200 527 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 512 - GO:0016020(PANTHER)
Mch6g0200 527 CDD MFS_Mch1p_like 9 498 - -
Mch6g0200 527 Pfam Nodulin-like 9 260 IPR010658 -
Mch6g0200 527 SUPERFAMILY MFS general substrate transporter 215 509 IPR036259 -
Mch6g0200 527 Gene3D MFS general substrate transporter like domains 210 507 IPR036259 -
Mch6g0200 527 SUPERFAMILY MFS general substrate transporter 17 199 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0200 Mch-Chr6:1333315 Mch6g0203 Mch-Chr6:1349791 5.06E-214 dispersed
Mch6g0200 Mch-Chr6:1333315 Mch6g0201 Mch-Chr6:1340668 6.45E-103 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0200 - - - 0.0