Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0203 ATGGAAGGTACAGGTATAGGGTTTATGAGCAATAAATGGATTGCTACGGCCCTCAGTATCTGGATCCAGTGCGTCTCCGGCGCATCCTACACCTTCAGCATCTACTCCGCGGCTCTCAAATCCACCCAGGGCTACGATCAATCCACCCTCGACACCGTTTCCGTTTTCAAGGACATCGGCGCCAACGCCGGCGTTGTTTCTGGCTTTCTTTACACCGCCGTCACTCCCGCCACCCCCCGTCGTAGCTCCCCGGCTCGCTTTCTGTCTGGCCCATGGATCGTGCACGCCGGGGGAGCGATTCAGTGGTTCGTCGGATATATTTTTATCTGGGCGGCGGTCTCCGGAGTGATCGATCGCCCGCCCGTCCCCGCGATGTGCTTCTTTATGTTTCTTGCTGCGCATGCGCAGACGTTTTTCAATACGGCGAACGTGGTCACTGGCGTGCACAATTTTGCGCACTATAGCGGAACAATTGTCGGAATCATGAAGGGATATCTTGGTCTTAGTGGAGCACTGTTAATCCAAGTTTATAACACATTCTGTAATGGAGAACCAAGCAATCTTCTCCTCATGCTGGCTGTTTTGCCCACACTTCTTTCCCTCCTGGTCATGTGGTTTGTTAGAATCGACAAAACCGAGACTAGTAATGAGATGAAGCATTTGAACTCATTGTCTGCACTTGCTGTGATACTTGCTTTTTATCTAATGATTGTCATCATTCTGGAAAACACTTTCCCCCTTTCATCTTGGACTCGTCTTTTGACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGGAATCTCCATTAATGCTCAGAGGGAGGACTTTGGAGGGTCATCTCCTTCACCCTACACTGAAAAAAGTCCTGTTCTTGACGAACCTCTGGAATATCATGAATTGGCAAGTGATGAGAGCCAGCAAATTGCTGTTTCAAACTCCAGGGCCCCTCGAGCCATGAATGTCCTGGAAGCTATACGTTCTATAAACTTCTGGCTGCTGTTCTTTGCCATGGTGTGTGGAATGGGTTCCGGATTGGCCACCATAAACAACATGAGCCAACTTGGACAATCTCTTGGTTACACAGTAACAGAGACAAAAACCTTCGTTTCCTTGTGGAGCATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTCCTTCTCCACTCATATGGCTGGGCGAGGCCATTGTTAATGGCAATTACTCTGCTCATAATGAGTGGTGGCCACATCGTGATCGCCTCTGGTTTCTCTGGAAATCTGTACGTGGGTTCAGTTCTTGTTGGCATATGCTACGGCTCACAGTGGGGACTGATGCCCACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGTACTATTTTCAACACCATAGCCATAGCCAGCCCTCTGGGGTCTTACATTTTCTCTGTTAGAGTCATCGGTTACATTTACGACCGAGAAGCCGCCGGAAAACATGGCTCCTGCTCCGGCACACACTGCTTTGTGGTATCTTTTCTGGTCATGGCCGCCGTGGCTTTCTTGGGCTTTCTTGTTGCTGCTGCTCTCTTCTTTCGGACTAGGAGATTTTACCGGCTGGCTTTTCAAAGAAGAGTTGAACGCCTCAGTTAA 1629 48.8 MEGTGIGFMSNKWIATALSIWIQCVSGASYTFSIYSAALKSTQGYDQSTLDTVSVFKDIGANAGVVSGFLYTAVTPATPRRSSPARFLSGPWIVHAGGAIQWFVGYIFIWAAVSGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHYSGTIVGIMKGYLGLSGALLIQVYNTFCNGEPSNLLLMLAVLPTLLSLLVMWFVRIDKTETSNEMKHLNSLSALAVILAFYLMIVIILENTFPLSSWTRLLTFSILLILLAAPLGISINAQREDFGGSSPSPYTEKSPVLDEPLEYHELASDESQQIAVSNSRAPRAMNVLEAIRSINFWLLFFAMVCGMGSGLATINNMSQLGQSLGYTVTETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLLIMSGGHIVIASGFSGNLYVGSVLVGICYGSQWGLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAGKHGSCSGTHCFVVSFLVMAAVAFLGFLVAAALFFRTRRFYRLAFQRRVERLS 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1349791 1352813 - MC06g0169 Mch6g0203 689650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0203 542 Gene3D MFS general substrate transporter like domains 288 533 IPR036259 -
Mch6g0203 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 530 - GO:0016020(PANTHER)
Mch6g0203 542 CDD MFS_Mch1p_like 12 515 - -
Mch6g0203 542 Pfam Major Facilitator Superfamily 335 528 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Mch6g0203 542 Pfam Nodulin-like 12 271 IPR010658 -
Mch6g0203 542 SUPERFAMILY MFS general substrate transporter 225 528 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0200 Mch-Chr6:1333315 Mch6g0203 Mch-Chr6:1349791 5.06E-214 dispersed
Mch6g0201 Mch-Chr6:1340668 Mch6g0203 Mch-Chr6:1349791 9.61E-133 dispersed
Mch6g0203 Mch-Chr6:1349791 Mch9g1814 Mch-Chr9:19936996 8.40E-109 dispersed
Mch6g0202 Mch-Chr6:1347481 Mch6g0203 Mch-Chr6:1349791 4.52E-43 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0203 - - - 0.0