Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0205 ATGGGGCGTAAGAAGAAAATTGTTGATCCGCGTTCCAAACAATCTCCGGCGGCTCGAGGAGTCGCCGTTGATGTTCCAAGTGTAGCGAACTCCGACCAAAGCTCGGTTCCCGATAAGTCAAGTAATCACAACCAAAATAGGATCGAGTCGGTGTTTGGTAATGAATCGGACGGCTTGTCTTATTCTACAATTAAGCTCGAATGCGAGCGGGCTCTTACGGCGCTTCGGCGTGGGAATCACACTAAGGCACTCAGGCTTATGAAGGAGTTGAGCTCGCGAAACGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGCACTATTTGTGTAAAAGTAGCATCGATTATTGATGACCTGAATACAAAGCAGCGGCATTTGAAGAATGCGATTGAGTCTGCTCGTAAAGCAGTCGAGCTCTCACCAAGCTCGATTGAGTTTTCCCATTTCTATGCAAATTTGTTGTACGAGGTTGCCAATGATGCGAAGGAGTACGAGGAGGTGGTGCAAGAGTGTGAACGGGCCCTTGGCATTGAAAATCCAATTGATCCCGCTAAGGAGAGCTTGCAGGATGAAAAGAATCAGAAGATACCTACTGCAGAAGCACGAATTGCCCATGTGCAGACTGAATTAAGGCAGTTAATTCAAAAGTCAAATATCTACTCCATATCATCTTGGATGAAGAACTTGGGTAACGGGGAGGAGAAGTTTAGGTTGATTCCGATTAGAAGAGTGACAGAAGACCCCATGGAGGTCAGGTTGGTTCAGGCTAGAAGGGCAAACGAAATTAAGAAGGCAACTAAAACGCCTGAGGAGCGGAGGAAGGAGATTGAAGTCCGTGTTGCTGCTGCAAGGCTTTTGCAACAGAAGTCTGATACACCTCAAATGCAAAATGAAGGAGGCAAAGCTGATCGGACCCTGGATTCATCGTCAGGGTCTGGTACAAGAGTCGGTGAACGGCGGAAACATGGAAATTTACGGAAACATGGATCTTCAGCTGAAAGGAGGGATTGGGTTCATTCTTTTTGGAATTCCATGAGTATGGAATCGAAGAAAGATTTCCTTAAGATCAAGATAAGTGATCTTAACACTCATATTAGTTCTTCAAAGGATGCTTCAGCGAATGAAGTTATTTCAGAAGCTTTATCCTTTTGTGATGCCAATAAAACATGGAAATTTTGGGTTTGCTGCAGATGTGATGAGAAATTTGTGGATTCGGAATCTCATATGCACCATGTGGTTCAGGAGCACATGGGTAACCTTTTGCCGAAAATGCAGTCTATCTTGCCACAGAATGTTGACAATGAGTGGGCTGAAATGCTTCTTAATTGCTCTTGGAAAGCACTGGATGTTTCAGCTGCAGCTAAAATGCTCACAGATCAAACAAAATGCAAGGATTCTGAGTTGGTTGAAGATATCTGCTTGCAGCATCATTCTGACAGTGATGACTGTTTCAAAGATGCATGGGATTCTTCCCCAGAGAAACACAATTATGGGAATGGTTTAAACGAGTGCAATGTTTACGAGAAAGTTGGCAACAATGGATTTAAGGCCTGTCATGAAAACCAAGGTTCTGTGACATCATACTCCTTATCTGATAGCTTTCCAGTATCTGATGATTCAGAGCGAACAAAGCTTCTTGAGAAAATTCATGCGATATTTGAGTTACTTATTAGACATAAATATCTTGCTGCAAGCCATCTAAACAAGGTTATACAGTTTACAATGGATGAGTTACAAGGTCTTTCTGGATATCATCTTCTGAACCAGGGACTGGACCAAACACCACTATGCATCTGCTTTCTTGGTGCTTCTCAGCTTAGGAAAATCTTCAAGTTCTTGCAAGAACTATCTCATTCTTGTGGTTTTGGTAGATACGTTGATAAAAGTACCGGTCAAATTGAAGATTCAAAGAACGATAAACAATCTGTTGAGGTCAAAGAGAAGATTGTTCTCAATGAAGATGCGTCACTGCTCCTCCTCAATGAGTGTTTTCTGTCATCTGATTTCACTCATGCCAATGGTCAGGCTGCAGCCACAGATCATATTCCAGTTCCAACTGCTAAGGATGTTACTGCAAATGGGGTTTTTTCTGATGCTGATCCTTTTCTATCATGGATATATGCAGGTCTTTCTAGTGGGGAACAGTTATCATCATGGGCACAAACAAAGGAAGAAAAGATACAGCAAGGAATGGAAATTCTTCAAATGCTTGAAAAGGAATTTCTGCATCTACAGAGCCTTTGTGAGAGAAAATGTGAGCATTTGAGCTATGAGGAAGCATTGCAGTTATTAGAGGATCTTTGCCTTGAAGAGGGCAAGAAGAGGGAAGCTGTGACTGAATTTATCCCCAAGAGTTATGAGTCAGTCCTGAGGAAACGAAGAGAAGAGCTTATTGATGTTGAAAATGACGTTATGTTTCTCAGTAGGTTTGAGTTAGATGCTATAACTAATGTTTTGAAAGAAGCAGAAGCTTTGAATGTTAATCAATATGGATATGGGGAAACTTTTTCCAGCATGCCTTCTCAGTTATGTGATCTGGAATCTGGTGAAGATGAAGATTGGAGGACTAAGGATTATTTGCATCAAGTTGATACTTGTATCGAAGTTGCCATCCAGAGACAGAAAGAACAGTTATCTATCGAGATTAGCAAAATTGATGCACGCATCATGCGAAATGTTACTGGAATGCAACAGTTGGAACTTAAGCTGGAACCTGTTTCTGCACATGATTATCAATCAATATTGTTGCCTCTTGTGAACTCATACTTGAGGGCACATTTAGAAGATTTAGCTGAAAAAGATGCCACGAAGAAGTCTGATGCTGCAAGAGAAGCATTTTTAGCTGAACTAGCACTGGATTCAAAAAAGGGTATGAGAGGAGGAAGTGATAATCTGAGACATGCACATGAAAAGCCGAAGGAAAAGAAAAGGAACAAGGAGTTTAGGAAAGCCAAGGACTCTAAGGTAGTCAGTGGTCCTGAGCAGGATGCGCTTCATGATGAAGATGTAGATGGAGATCCCTTTCAAGTTGCATCTGATGGTGATGCAGCAGAGGTGGATATTGCTGTTTTTGAGAATGGTAATGCTTTAAGACTACAGGAGGAAGAGTTTAGACGCAAAATTGAGCTGGAAGCCGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGGCGAATTGAGAATGAGGCCAAACAAAAGCATCTGGCTGAACTACAAAAGAAATCTGCCCAGACAAATCCAGAGAAGAAAGTTGCTGTGGCAATACATGATAATCTCTTGGGACTTGTCCCTGATGTTGAGGGTGCTGATGAGCATTTTAAGCTCTCTGTGGTGGATCAATTGGCAGAAAATGATTTGGTTCCCGACTTGTCTAGGAACGGTCCTGCAATGTCACATGCTCCTTCAGGTGTATCCAATGTTGGAGTTCTAGAGAATTGTCTGTCGTCTTCTGATAGACGGAAGGGAAGGAAAGGTAGACGGCACAAGGTTTCTATTAAACCAGTAGATGGAAATCAGCCTTCACCATCTGATAAGGATAATGCAGCCTTTGACAGCCGATTGAATGAGACAGTTAGATATCATAGCAATTTCCTAGCAGATAGTGTTAATCCACTTTCTGAAGATAATAGTAAAAAGACTTTGAGACAACATCATGTAGAGGATGATGAGGAAAGATTTCAAGCTGATCTTAAAAAGGCCGTACGCCAGAGCCTTGATACGTTTCAAGAACAGCAGAAATTACCCTTGATTTCAAGTTCCAGGATACCATTGATTAGTTGTGGTAAAGTAGATAGTAATGGCGTTCCATCGAATGAACTCAATGTAGAAAATGTGCAGGGAGCAGATATGTTTGGGACAGGACTTAAGAATGAAGTTGGTGAATATAATTGCTTTCTGAATGTGATTATTCAGTCCTTATGGCATTTAAGACGGTTTCGGGAAGAGTTCCTGAGGAGATCTATGACTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGAAATCTTTGCTGCCTTGAGCATGGCATCTGCAGATGTTAGAAGAGAAGCAGTTGCCCCCACTTCTTTGAGAATAGCTCTAAGCAATCTCTGTCCGGATAGTAATTTCTTCCAAGAGGGCCAGATGAATGATGCCTCTGAGGTGCTGGCAGTCATATTTGATTGCCTACACCAGTCATTGACTCCTAGTTCGAGCGTTTCTGATACAGAATCAGTAGAAAGCAATTGCATGGGATCTTGGGACTGTGCAAGTGACACTTGTTTGGTCCATTCCATCTTTGGAATGGACATTTTTGAACGAATGAATTGCTATAGTTGTGGCCTGGAATCTAGACATTTGAAGTACACTTCGTTCTTCCACAATATAAATGCTAGTGCCCTTCGAACAATGAAGGTTATGTGTACTGAAAGTTCCTTCGATGAACTTCTAAATGTTGTTGAAATGAATCATCAGCTTGCTTGTGACTTGGATGTTGGTGGTTGTGGAAAGCTCAATTACATTCATCACTTTCTTTCTGCACCACCACATGTGTTCACCACAGTCTTGGGCTGGCAGAACACCTGTGAGAGTGCTGACGACATCACAGCAACATTAGCTGCTCTAAGTACTGAGATAGACATCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATACCCATAATTTGGTATCGGTGGTTTGCTATTATGGTCAACACTATCATTGCTTTGCCTACAGTAATGACAAGAAATGCTGGATAATGTACGATGATAGAACTGTTAAGGTAATTGGTGACTGGGCTGATGTTCTTACCATGTGCGAAAGAGGACACTTGCAACCGCAGGTTCTTTTCTTTGAAGCTGTAAATTAA 4869 41.86 MGRKKKIVDPRSKQSPAARGVAVDVPSVANSDQSSVPDKSSNHNQNRIESVFGNESDGLSYSTIKLECERALTALRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTICVKVASIIDDLNTKQRHLKNAIESARKAVELSPSSIEFSHFYANLLYEVANDAKEYEEVVQECERALGIENPIDPAKESLQDEKNQKIPTAEARIAHVQTELRQLIQKSNIYSISSWMKNLGNGEEKFRLIPIRRVTEDPMEVRLVQARRANEIKKATKTPEERRKEIEVRVAAARLLQQKSDTPQMQNEGGKADRTLDSSSGSGTRVGERRKHGNLRKHGSSAERRDWVHSFWNSMSMESKKDFLKIKISDLNTHISSSKDASANEVISEALSFCDANKTWKFWVCCRCDEKFVDSESHMHHVVQEHMGNLLPKMQSILPQNVDNEWAEMLLNCSWKALDVSAAAKMLTDQTKCKDSELVEDICLQHHSDSDDCFKDAWDSSPEKHNYGNGLNECNVYEKVGNNGFKACHENQGSVTSYSLSDSFPVSDDSERTKLLEKIHAIFELLIRHKYLAASHLNKVIQFTMDELQGLSGYHLLNQGLDQTPLCICFLGASQLRKIFKFLQELSHSCGFGRYVDKSTGQIEDSKNDKQSVEVKEKIVLNEDASLLLLNECFLSSDFTHANGQAAATDHIPVPTAKDVTANGVFSDADPFLSWIYAGLSSGEQLSSWAQTKEEKIQQGMEILQMLEKEFLHLQSLCERKCEHLSYEEALQLLEDLCLEEGKKREAVTEFIPKSYESVLRKRREELIDVENDVMFLSRFELDAITNVLKEAEALNVNQYGYGETFSSMPSQLCDLESGEDEDWRTKDYLHQVDTCIEVAIQRQKEQLSIEISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDATKKSDAAREAFLAELALDSKKGMRGGSDNLRHAHEKPKEKKRNKEFRKAKDSKVVSGPEQDALHDEDVDGDPFQVASDGDAAEVDIAVFENGNALRLQEEEFRRKIELEADERKLEETLEYQRRIENEAKQKHLAELQKKSAQTNPEKKVAVAIHDNLLGLVPDVEGADEHFKLSVVDQLAENDLVPDLSRNGPAMSHAPSGVSNVGVLENCLSSSDRRKGRKGRRHKVSIKPVDGNQPSPSDKDNAAFDSRLNETVRYHSNFLADSVNPLSEDNSKKTLRQHHVEDDEERFQADLKKAVRQSLDTFQEQQKLPLISSSRIPLISCGKVDSNGVPSNELNVENVQGADMFGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALSMASADVRREAVAPTSLRIALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTPSSSVSDTESVESNCMGSWDCASDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTMKVMCTESSFDELLNVVEMNHQLACDLDVGGCGKLNYIHHFLSAPPHVFTTVLGWQNTCESADDITATLAALSTEIDISVLYRGLDPKNTHNLVSVVCYYGQHYHCFAYSNDKKCWIMYDDRTVKVIGDWADVLTMCERGHLQPQVLFFEAVN 1622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1365541 1375855 - MC06g0171 Mch6g0205 689652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0205 1622 Coils Coil 722 742 - -
Mch6g0205 1622 MobiDBLite consensus disorder prediction 289 315 - -
Mch6g0205 1622 Pfam Ubiquitin carboxyl-terminal hydrolase 1290 1617 IPR001394 GO:0004843(InterPro)|GO:0016579(InterPro)
Mch6g0205 1622 Pfam Protein of unknown function (DUF627) 71 180 IPR006866 -
Mch6g0205 1622 MobiDBLite consensus disorder prediction 27 51 - -
Mch6g0205 1622 MobiDBLite consensus disorder prediction 289 333 - -
Mch6g0205 1622 MobiDBLite consensus disorder prediction 961 1007 - -
Mch6g0205 1622 Coils Coil 198 218 - -
Mch6g0205 1622 Coils Coil 1045 1065 - -
Mch6g0205 1622 Coils Coil 118 138 - -
Mch6g0205 1622 MobiDBLite consensus disorder prediction 1 51 - -
Mch6g0205 1622 CDD Peptidase_C19 1381 1619 - -
Mch6g0205 1622 Gene3D Tetratricopeptide repeat domain 62 217 IPR011990 GO:0005515(InterPro)
Mch6g0205 1622 SUPERFAMILY Cysteine proteinases 1289 1619 IPR038765 -
Mch6g0205 1622 PANTHER UBIQUITIN SPECIFIC PROTEINASE 11 1620 IPR052398 -
Mch6g0205 1622 Gene3D Cysteine proteinases 1278 1622 - -
Mch6g0205 1622 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1289 1621 IPR028889 -
Mch6g0205 1622 MobiDBLite consensus disorder prediction 1151 1185 - -
Mch6g0205 1622 MobiDBLite consensus disorder prediction 959 1007 - -
Mch6g0205 1622 ProSitePatterns Zinc finger C2H2 type domain signature. 397 418 IPR013087 -
Mch6g0205 1622 Pfam Protein of unknown function (DUF629) 340 871 IPR006865 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0205 - - - 0.0