Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0207 AGCTCTTCATTTTCTTTGAATTATGGTTCAGAGACAAAGGATGATGGAAGAAAAGAAAGACGACGATGGAGATACAGCGGAGATCGATTCGAACACTTTTCTATAACGGGGTGGTGTCATAAGAGGAAAATGGGAGACAAAGATGAGAAGCCTGAGGTTTTGGAGGCTGTATTGAAGGAAACTGTGGACTTGGAAAACATACCCATCGAGGAGGTTTTTGATAATCTGAGATGTAGTAAAGAGGGTCTTACCACAGCGGCTGCTGAGGAACGACTTGTAATTTTTGGTCACAACAAGCTTGAGGAGAAGAAGGAAAGTAAAATCTTGAAGTTTTTGGGGTTTATGTGGAATCCCCTCTCATGGGTAATGGAAGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGGGGAGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTATCTCCCTGTTGCTTATCAACTCAACCATCAGTTTTATTGAGGAAAACAACGCTGGTAATGCTGCCGCTGCTCTAATGGCTAGTTTAGCTCCCCAAGCCAAGATTCTTCGAGATGGAAGGTGGAGTGTGCAAGATGCTTCAGTTTTAGTTCCTGGTGATGTTATAAGCATCAAACTTGGGGATATAATTCCAGCTGATGCTCGTCTTCTAGAGGGGGATCCATTGAAAATTGATCAGTCTGCTCTTACAGGCGAGTCCCTTCCTGTTACGAAAGGTCCTGGGGATGGGATATACTCTGGTTCCACTTGCAAACAAGGGGAAATTGAAGCAGTGGTCATCGCCACTGGTGTGCATACTTTCTTTGGGAAGGCTGCTCACCTTGTTGACACCACTAATCAAGTGGGCCACTTCCAAAAGGTTTTAACTGCAATAGGGAACTTCTGCATATGTTCAATTGCTGTGGGGATGATTACAGAAATTATTGTCATGTACCCAATTCAAGATCGGGAATATCGTCCTGGAATCGATAATCTTCTCGTGCTTCTGATTGGAGGAATTCCAATTGCCATGCCCACAGTCCTCTCTGTAACAATGGCTATTGGCTCCCATAGGTTATCCCAGCAGGGTGCTATCACTAAGAGGATGACTGCAATTGAAGAGATGGCAGGTATGGATGTGCTTTGCAGTGACAAGACTGGAACTCTGACATTAAACAAGCTAACCGTTGACAAAAATCTTGTTGAGGTTTTTGCTAAAGGAGTGGATGTGGATACTGTGGTTTTAATGGCAGCCCGGGCATCAAGAACAGAGAATCAAGATGCTATTGATACTGCTATTGTTGGGATGCTTGCTGATCCGAAAGAGGCTCGTGCTGGTATCCAAGAAGTACATTTCCTTCCTTTTAACCCTACTGATAAGCGGACTGCATTGACTTACATAGACCATGAAGGTAAAATGCATAGGGTCAGCAAAGGTGCACCAGAGCAGATTCTGAACCTTGCACACAATAAATCGGAAATTGAGCGGAAAGTTCATGCTGTGATTGATAAGTTTGCGGAGCGAGGTTTACGTTCTCTTGCTGTGGCATACCAGGAAGTTCCAGATGGTAGGAAAGAGAGTGCTGGAGGGCCATGGCAGTTTATTGGCCTTCTACCACTGTTCGACCCACCAAGACATGATAGTGCGGAGACTATAAGGAGGGCCTTAAATCTTGGAGTGAACGTGAAGATGATTACTGGCGACCAGCTGGCGATAGGAAAGGAAACAGGACGTCGCTTGGGGATGGGAACCAACATGTATCCCTCTTCTGCTTTATTAGGTCAGGACAAGGATGAGTCCATTGCTGCTTTACCTGTTGATGAACTGATAGAAAAAGCTGATGGCTTTGCTGGTGTTTTTCCTGAGCACAAATATGAGATTGTAAAGCGCCTGCAGGCAAGGAAACATATCTGTGGGATGACTGGTGATGGAGTAAATGATGCTCCAGCCCTTAAGAAAGCAGACATAGGGATAGCTGTTGCTGATGCTACTGATGCTGCTCGTAGTGCTTCAGACATAGTCCTTACGGAACCTGGTCTCAGTGTTATCATTAGTGCTGTTTTGACCAGCCGAGCAATCTTCCAAAGGATGAAAAATTACACTATATATGCAGTTTCAATCACTATTCGTATAGTGCTAGGTTTCATGTTGCTGGCTCTCATATGGAAATTTGACTTCCCACCTTTTATGGTGCTCATCATTGCCATTCTCAACGATGGTACCATAATGACAATATCGAAGGATAGAGTGAAGCCATCTCCTTTGCCTGATAGCTGGAAGCTGGCGGAAATTTTCACAACTGGCATCATACTCGGAGGCTATTTGGCAATGATGACTGTTATCTTCTTTTGGGTAGCCTATAAAACAGACTTCTTTCCACGAGTTTTTGGGGTAGCAACTCTCGAGAAAACTGCTCACGATGACATTAGGAAACTTGCCTCAGCAGTGTATTTGCAAGTAAGCACTATTAGTCAGGCTCTCATATTTGTTACACGCTCGCGAAGTTGGTCGTACGTGGAACGTCCTGGGTTATTACTGGTCGTGGCTTTCCTGGTTGCACAGCTGATTGCTACTTTAATTGCGGTTTATGCAAATTGGAAGTTTGCTGCCATTGAAGGAATTGGATGGGGTTGGGCCGGTGTTATTTGGCTATACAACATCATCTTTTACATCCCACTAGATCTCATAAAGTTCTTTACACGATATGCTTTGAGTGGGAGGGCTTGGGATCTTGTTATTGAACAAAGGATTGCGTTTACGAGGCAAAAGGACTTCGGGAAGGAACAGCGGGAGCTACAATGGGCTCATGCACAAAGAACATTACATGGACTGCAAGCGCCGGATGCCAAAATGTTCCATGACCGAACTCACTTCACCGAGCTCAATCAGATGGCCGAAGAAGCCAAAAGGAGAGCTGAAATTGCAAGGTTGAGGGAACTACACACTCTGAAAGGCCATGTTGAATCAGTGGTGAGGCTGAAAGGACTTGACATCGACACGATTCAGCAAGCTTACACTGTTTGA 3009 44.8 SSSFSLNYGSETKDDGRKERRRWRYSGDRFEHFSITGWCHKRKMGDKDEKPEVLEAVLKETVDLENIPIEEVFDNLRCSKEGLTTAAAEERLVIFGHNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIISLLLINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSVQDASVLVPGDVISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMITEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIILGGYLAMMTVIFFWVAYKTDFFPRVFGVATLEKTAHDDIRKLASAVYLQVSTISQALIFVTRSRSWSYVERPGLLLVVAFLVAQLIATLIAVYANWKFAAIEGIGWGWAGVIWLYNIIFYIPLDLIKFFTRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFHDRTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 1002
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1390538 1399373 + MC06g0173 Mch6g0207 689654
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0207 1002 ProSitePatterns E1-E2 ATPases phosphorylation site. 379 385 IPR018303 -
Mch6g0207 1002 SUPERFAMILY Calcium ATPase, transduction domain A 180 277 IPR008250 -
Mch6g0207 1002 Gene3D - 180 264 - -
Mch6g0207 1002 Gene3D - 374 673 IPR023214 -
Mch6g0207 1002 Pfam Cation transporter/ATPase, N-terminus 66 129 IPR004014 -
Mch6g0207 1002 PANTHER CALCIUM-TRANSPORTING ATPASE 65 950 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Mch6g0207 1002 SUPERFAMILY Calcium ATPase, transmembrane domain M 63 899 IPR023298 -
Mch6g0207 1002 SFLD C1.7: P-type atpase like 359 687 - -
Mch6g0207 1002 Pfam haloacid dehalogenase-like hydrolase 373 650 - -
Mch6g0207 1002 CDD P-type_ATPase_H 82 893 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Mch6g0207 1002 FunFam Plasma membrane ATPase 530 684 - -
Mch6g0207 1002 Gene3D - 389 536 IPR023299 GO:0000166(InterPro)
Mch6g0207 1002 SFLD p-type atpase 359 687 IPR044492 -
Mch6g0207 1002 SUPERFAMILY HAD-like 373 683 IPR036412 -
Mch6g0207 1002 FunFam Plasma membrane ATPase 389 536 - -
Mch6g0207 1002 PRINTS H+-transporting ATPase (proton pump) signature 493 511 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0207 1002 PRINTS H+-transporting ATPase (proton pump) signature 608 624 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0207 1002 PRINTS H+-transporting ATPase (proton pump) signature 812 833 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0207 1002 PRINTS H+-transporting ATPase (proton pump) signature 636 652 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0207 1002 PRINTS H+-transporting ATPase (proton pump) signature 667 692 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0207 1002 Gene3D - 142 867 - -
Mch6g0207 1002 Pfam E1-E2 ATPase 178 356 - -
Mch6g0207 1002 FunFam ATPase 4 plasma membrane-type 621 867 - -
Mch6g0207 1002 FunFam Plasma membrane ATPase 180 264 - -
Mch6g0207 1002 NCBIfam plasma-membrane proton-efflux P-type ATPase 82 858 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Mch6g0207 1002 Gene3D - 951 1002 - -
Mch6g0207 1002 Coils Coil 953 973 - -
Mch6g0207 1002 PRINTS P-type cation-transporting ATPase superfamily signature 227 241 - -
Mch6g0207 1002 PRINTS P-type cation-transporting ATPase superfamily signature 531 542 - -
Mch6g0207 1002 PRINTS P-type cation-transporting ATPase superfamily signature 553 563 - -
Mch6g0207 1002 PRINTS P-type cation-transporting ATPase superfamily signature 377 391 - -
Mch6g0207 1002 PRINTS P-type cation-transporting ATPase superfamily signature 636 655 - -
Mch6g0207 1002 PRINTS P-type cation-transporting ATPase superfamily signature 659 671 - -
Mch6g0207 1002 NCBIfam HAD-IC family P-type ATPase 611 724 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0207 1002 NCBIfam HAD-IC family P-type ATPase 149 584 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0207 1002 SMART Cation_ATPase_N_a_2 63 135 IPR004014 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0207 Mch-Chr6:1390538 Mch8g0384 Mch-Chr8:2734768 0 dispersed
Mch3g1513 Mch-Chr3:17291607 Mch6g0207 Mch-Chr6:1390538 0 wgd
Mch4g2282 Mch-Chr4:24302790 Mch6g0207 Mch-Chr6:1390538 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0207 K01535 - csv:101217264 1790.01