Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0211 ATGGGTCTTTTTCTTTGGGTCTTCTCCTTGATTTCAGCCGCAACCCTTTTGAGCCACTGCTCCTTTTCTCTCACTGAAGATGGTTTGACATTGTTGGAAATCAGAAGTACTTTGAATGACAGTAAGAACTTCCTCAGTAATTGGAGCCCTTCGGATGAATCTCCCTGCCAATGGACCGGTATCGCTTGTCATCCCCAGGACTCTCGTGTCAGCTCAATTAATCTTCCATTCATGCAGCTTGGAGGGATAATATCTCCCAGCATTGGGAAACTTAGTAGATTGCAGAGGCTGGCTTTCCATCAGAACGGCTTACATGGATATATTCCCAATGAAATTGCCAATTGTTCTGAACTTAGAGCCGTGTACCTGAGGGCTAATTATCTTCAAGGTGGCATACCATCAAATATTGGGAATCTTTCTTACCTTACCATACTTGATTTATCAAGCAATTCCCTTAAGGGCAGCATACCATCATCAATTGGTCGACTCACACGCTTGCGCAGTCTGAACTTGTCTACCAACTTTTTCTTTGGAGAAATCCCAGATATTGGAGTTCTGAGCACCTTTGGGAACGACTCGTTCCGTGGTAATCAAGATCTTTGTGGGCGGCAAGTGAACAAGCCATGTCGGACCTCACTGGGGTTTCCTGCCGTTTTACCACACGCTGAAAGCGATGAAGCCACAGTTCCTGTGAAACGATCCTCTCATTACATCAAAGGAATATTAATTGGAGCAATGTCGACAACGGGGCTAGTGTTGGTCGTACTTCTTGCTTTCATGTGGGCTCGTTTGCTATCGAAGAAAGAAAGAGCTGCCAAGAGTTACATGGAAGTTAAAAAGCAAAAAGATCGCGAACAAAGTGCAAAGCTTATTACATTCCATGGGGATCTACCGTACCCAACATGTGAGATCATAGAAAAGCTGGAGGCCCTTAACGAAACAAATGTTGTTGGCTCTGGAGGTTTTGGCACCGTGTATCGGATGATCATGAATGATTGTGGAACATTCGCTGTAAAGAAAATCGATAGGACTCGAGACGGTTCAGACCAAGTAGTCAAAAGAGAGTTGGAGATATTGGGAAGCATTAAACACATTAATTTAGTGAAATTGCGTGGTTATTGCAGGCTTCCTTCTTCAAAGCTTCTTATATATGACTATCTGGCCGCGGGTAGCTTGGATGATTTCTTGCACGAGCATGGACAAGAAAAGTCTTTGGATTGGAGTGCTCGGTTAAACATAGCGCTTGGCTCCGCTCGAGGATTGGCGTACTTGCACCATGATTGCTGTCCAAAGATTGTTCACTGTAACATAAAATCCAGCAACATTCTTCTCGACGAGAAGTTAGAGCCACACGTATCCGACTTTGGTCTCGCAAAACTTTCGGTTGATGGGGATTCCCATGTCACAACTGTTGTTGCTGGCACATTTGGTTATTTGGCTCCAGAATACTTGCAAAGTGGGATAGGAACTGAGAAGTCAGATGTTTATAGCTTTGGAGTTCTCTTGTTGGAGCTTGTAACAGGGAAGAGACCTAGTGATCCATTTTTCTCAAAGAGGGGATTAAGTGTTGTTGGTTGGTTGAACTCGCTCCGGGGAGAAAACCAGATGGAGAATATAGTGGATAAGAGGTGCAAGAATGCAGATGCCGAAACCGTAGAAGCGATTCTTGAAATCGCAGCAAGGTGCACTGATGGCAACCCTACAACACGACCTACAATGAACCAAGTACTGCAGCTGCTAGAGCAAGAGGTAATGTCGCCATACCCGAGCGATTACTCCGAGTCTCAGTCGGATCATTCGTGA 1803 44.81 MGLFLWVFSLISAATLLSHCSFSLTEDGLTLLEIRSTLNDSKNFLSNWSPSDESPCQWTGIACHPQDSRVSSINLPFMQLGGIISPSIGKLSRLQRLAFHQNGLHGYIPNEIANCSELRAVYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGSIPSSIGRLTRLRSLNLSTNFFFGEIPDIGVLSTFGNDSFRGNQDLCGRQVNKPCRTSLGFPAVLPHAESDEATVPVKRSSHYIKGILIGAMSTTGLVLVVLLAFMWARLLSKKERAAKSYMEVKKQKDREQSAKLITFHGDLPYPTCEIIEKLEALNETNVVGSGGFGTVYRMIMNDCGTFAVKKIDRTRDGSDQVVKRELEILGSIKHINLVKLRGYCRLPSSKLLIYDYLAAGSLDDFLHEHGQEKSLDWSARLNIALGSARGLAYLHHDCCPKIVHCNIKSSNILLDEKLEPHVSDFGLAKLSVDGDSHVTTVVAGTFGYLAPEYLQSGIGTEKSDVYSFGVLLLELVTGKRPSDPFFSKRGLSVVGWLNSLRGENQMENIVDKRCKNADAETVEAILEIAARCTDGNPTTRPTMNQVLQLLEQEVMSPYPSDYSESQSDHS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1415611 1419504 + MC06g0175 Mch6g0211 689658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0211 600 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 186 - -
Mch6g0211 600 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 178 583 IPR050647 -
Mch6g0211 600 ProSitePatterns Protein kinases ATP-binding region signature. 317 340 IPR017441 GO:0005524(InterPro)
Mch6g0211 600 Gene3D Transferase(Phosphotransferase) domain 1 387 592 - -
Mch6g0211 600 Gene3D Phosphorylase Kinase; domain 1 270 386 - -
Mch6g0211 600 SUPERFAMILY Protein kinase-like (PK-like) 292 586 IPR011009 -
Mch6g0211 600 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 387 591 - -
Mch6g0211 600 Pfam Leucine rich repeat 117 174 IPR001611 GO:0005515(InterPro)
Mch6g0211 600 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Mch6g0211 600 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0211 600 SUPERFAMILY L domain-like 25 183 - -
Mch6g0211 600 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Mch6g0211 600 Pfam Protein kinase domain 313 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0882 Mch-Chr11:5992348 Mch6g0211 Mch-Chr6:1415611 5.02E-155 dispersed
Mch11g0971 Mch-Chr11:6651344 Mch6g0211 Mch-Chr6:1415611 8.83E-89 dispersed
Mch6g0211 Mch-Chr6:1415611 Mch8g0035 Mch-Chr8:204411 5.15E-75 dispersed
Mch3g1516 Mch-Chr3:17303774 Mch6g0211 Mch-Chr6:1415611 8.51E-285 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77456 PF00069 Pkinase 6.50E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0211 - - - 0.0