Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0234 GTTTCATGTGCATGTATAATGTTAATTTTGTGTAGAAGCTACAATTCTGGATTGGATTGGGCGCAGTGCAATTTTGGGTTGCAAGAGAGCGTTTTCGACGTTGTTCCTTTGTTTGAGAGCTGCCCGGTTGAGGATATTGAGCCCATTAACACCTACATATCAGAAGATGTTCTGCGTGGTTATGGAGATGGGGTTGGGATTTGGGGCGAAATGGAGGCTGGATTTGGGTTTCAGAAGCAGCCATTACTGCTGGAGGGATCAGGTGGATTATCAGAAAATGGAGAGAGATCAAAAGAGAGGGTTATGAGAGGGAGAAGAAAGTGCAGAGAAAGCAGCAATAATGGTAGTAGTTCATCAAAAATGTTGTCGAGAAAAACAATATCTCAATACTTCTACATGCCTATTACTCAGGCGGCCAAAGAGCTGAATGTGGGACTCACTCTCTTGAAGAAGAGATGTAGAGAATTGGGTATTAGAAGATGGCCTCATAGGAAGTTGATGAGCCTCCAAACCCTAATCAAGAATGTTAAGGCAATGCAGGAACTTCGAGAGGGGGAGGAAGAGCGAAATGGAGTGAAGTTGAGGAATGTATTGGAGATATTAGAGGAAGAGAAGAAGGTGATGGAGGAGAGGCCAGACTTGCAGCTGGAGGACAACACTAAGAGGCTTAGACAAGCCTGTTTCAAGGCCAACTACAAAAAAAGGAAGCTCTCAGGTATGAGAATGACCAACAATGACTCCCAGTGTTTCTCCGGACCCGCTGCTGCGGCCCGAGGGATGTTCCGAGGTGAGGAGGAAGAGGATGAAGAAGAAGACGAGGACGAAGAAATGAAATATTTGTTGTCGGATTGCTCGTTTTCGTCGAGTAGCTGCTGTAGTATGATG 885 45.31 VSCACIMLILCRSYNSGLDWAQCNFGLQESVFDVVPLFESCPVEDIEPINTYISEDVLRGYGDGVGIWGEMEAGFGFQKQPLLLEGSGGLSENGERSKERVMRGRRKCRESSNNGSSSSKMLSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKAMQELREGEEERNGVKLRNVLEILEEEKKVMEERPDLQLEDNTKRLRQACFKANYKKRKLSGMRMTNNDSQCFSGPAAAARGMFRGEEEEDEEEDEDEEMKYLLSDCSFSSSSCCSMM 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1562023 1563239 + MC06g0195 Mch6g0234 689681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0234 295 PANTHER PROTEIN RKD4 108 249 IPR044607 GO:0003700(InterPro)
Mch6g0234 295 MobiDBLite consensus disorder prediction 92 110 - -
Mch6g0234 295 Coils Coil 169 189 - -
Mch6g0234 295 Coils Coil 191 211 - -
Mch6g0234 295 MobiDBLite consensus disorder prediction 88 121 - -
Mch6g0234 295 Pfam RWP-RK domain 122 169 IPR003035 -
Mch6g0234 295 ProSiteProfiles RWP-RK domain profile. 109 189 IPR003035 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0052 Mch-Chr10:288269 Mch6g0234 Mch-Chr6:1562023 2.74E-33 dispersed
Mch1g1650 Mch-Chr1:17412133 Mch6g0234 Mch-Chr6:1562023 1.38E-19 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43500 PF02042 RWP-RK 1.90E-21 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0234 - - - 0.0