Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0234 | GTTTCATGTGCATGTATAATGTTAATTTTGTGTAGAAGCTACAATTCTGGATTGGATTGGGCGCAGTGCAATTTTGGGTTGCAAGAGAGCGTTTTCGACGTTGTTCCTTTGTTTGAGAGCTGCCCGGTTGAGGATATTGAGCCCATTAACACCTACATATCAGAAGATGTTCTGCGTGGTTATGGAGATGGGGTTGGGATTTGGGGCGAAATGGAGGCTGGATTTGGGTTTCAGAAGCAGCCATTACTGCTGGAGGGATCAGGTGGATTATCAGAAAATGGAGAGAGATCAAAAGAGAGGGTTATGAGAGGGAGAAGAAAGTGCAGAGAAAGCAGCAATAATGGTAGTAGTTCATCAAAAATGTTGTCGAGAAAAACAATATCTCAATACTTCTACATGCCTATTACTCAGGCGGCCAAAGAGCTGAATGTGGGACTCACTCTCTTGAAGAAGAGATGTAGAGAATTGGGTATTAGAAGATGGCCTCATAGGAAGTTGATGAGCCTCCAAACCCTAATCAAGAATGTTAAGGCAATGCAGGAACTTCGAGAGGGGGAGGAAGAGCGAAATGGAGTGAAGTTGAGGAATGTATTGGAGATATTAGAGGAAGAGAAGAAGGTGATGGAGGAGAGGCCAGACTTGCAGCTGGAGGACAACACTAAGAGGCTTAGACAAGCCTGTTTCAAGGCCAACTACAAAAAAAGGAAGCTCTCAGGTATGAGAATGACCAACAATGACTCCCAGTGTTTCTCCGGACCCGCTGCTGCGGCCCGAGGGATGTTCCGAGGTGAGGAGGAAGAGGATGAAGAAGAAGACGAGGACGAAGAAATGAAATATTTGTTGTCGGATTGCTCGTTTTCGTCGAGTAGCTGCTGTAGTATGATG | 885 | 45.31 | VSCACIMLILCRSYNSGLDWAQCNFGLQESVFDVVPLFESCPVEDIEPINTYISEDVLRGYGDGVGIWGEMEAGFGFQKQPLLLEGSGGLSENGERSKERVMRGRRKCRESSNNGSSSSKMLSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKAMQELREGEEERNGVKLRNVLEILEEEKKVMEERPDLQLEDNTKRLRQACFKANYKKRKLSGMRMTNNDSQCFSGPAAAARGMFRGEEEEDEEEDEDEEMKYLLSDCSFSSSSCCSMM | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1562023 | 1563239 | + | MC06g0195 | Mch6g0234 | 689681 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0234 | 295 | PANTHER | PROTEIN RKD4 | 108 | 249 | IPR044607 | GO:0003700(InterPro) | |
Mch6g0234 | 295 | MobiDBLite | consensus disorder prediction | 92 | 110 | - | - | |
Mch6g0234 | 295 | Coils | Coil | 169 | 189 | - | - | |
Mch6g0234 | 295 | Coils | Coil | 191 | 211 | - | - | |
Mch6g0234 | 295 | MobiDBLite | consensus disorder prediction | 88 | 121 | - | - | |
Mch6g0234 | 295 | Pfam | RWP-RK domain | 122 | 169 | IPR003035 | - | |
Mch6g0234 | 295 | ProSiteProfiles | RWP-RK domain profile. | 109 | 189 | IPR003035 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0052 | Mch-Chr10:288269 | Mch6g0234 | Mch-Chr6:1562023 | 2.74E-33 | dispersed | |
Mch1g1650 | Mch-Chr1:17412133 | Mch6g0234 | Mch-Chr6:1562023 | 1.38E-19 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43500 | PF02042 | RWP-RK | 1.90E-21 | No_clan | Mch | TF |
Pathway information
