Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0241 | ATGGCAACCGTCACGACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCTCCCGGTCGAGGTTCCTATCTGGGTCTTCGAGTAAACTCCACCGCGAGCTGTCGGTTAAGCCCGTGGCCGCTTTGTCATCTTCATCCTTGAAGGTGGAAGCAAAGAAGGGAGAGTGGTTGCCAGGTCTGCCGTCTCCGGGATACCTGAATGGCAGTCTTCCGGGGGACAATGGATTCGATCCACTGGGGCTGGCGGAGGACCCAGAGAACTTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGAATGCTGCTGCCGGAGGTGTTTACGAAGATCGGAATCATAAACGCGCCGCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCGTCGTCGTCGACCCTGTTCGTGATCGAGTTCATTCTGTTCCATTACGTGGAAATCAGGAGATGGCAGGACATCAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCCCAAACGAAGTGGGCTACCCAGGCGGCATTTTCAACCCTCTCAACTTCGCTCCCACTCTCGAGGCCAAGGAGAAGGAGATCGCCAACGGGAGACTGGCAATGTTGGCGTTCTTGGGGTTCATAGTTCAACATAATGTGACTGGAAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCAGACCCGTGGCACAACACCATTGTCCAGACCTTCGGTGGGAATTAA | 759 | 56.26 | MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1588441 | 1590170 | - | MC06g0199 | Mch6g0241 | 689688 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0241 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - | |
Mch6g0241 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - | |
Mch6g0241 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
Mch6g0241 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 12 | 245 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Mch6g0241 | 252 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 63 | 242 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0241 | Mch-Chr6:1588441 | Mch8g0688 | Mch-Chr8:4936327 | 3.33E-67 | dispersed | |
Mch4g2062 | Mch-Chr4:22844328 | Mch6g0241 | Mch-Chr6:1588441 | 7.35E-48 | transposed | |
Mch6g0991 | Mch-Chr6:6967593 | Mch6g0241 | Mch-Chr6:1588441 | 5.13E-67 | transposed | |
Mch6g1282 | Mch-Chr6:10317379 | Mch6g0241 | Mch-Chr6:1588441 | 6.93E-50 | transposed | |
Mch9g2370 | Mch-Chr9:23612786 | Mch6g0241 | Mch-Chr6:1588441 | 5.08E-76 | transposed | |
Mch3g1735 | Mch-Chr3:18781206 | Mch6g0241 | Mch-Chr6:1588441 | 3.37E-167 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g0241 | K08910 | - | csv:101222701 | 489.574 |