Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0255 | ATGGCCGAGCCTTCGTCGAGTCTGCCCATGGATTCTCTCGGCGACATCGACGACTACATTTGGGCCAATGAAGGAGAGGGCTCATTGCCATGGGACATGTTTAGTCATGTTTTTGAATTTGTGCAAAAAGGGAATCAAGCATTTAGAGATAGTCACTTTGAAGAGGCGATCAAATATTACTCGAGAGCTAATAACATCAAACCAGGTGATCCAGTTATTCTCAACAATAGAAGTGCTGCTTATATCAGGGTTAGTCAATATCTGAAAGACAGACCACCATCTGCTTCTGAATATCGACCTTTGAATGGGTTGGATCCTACAATACATGCTGAACTGGCTCTAAAAGATGCTGAGAAGCTGATGGACCTATGCAGTAAATCAGTGAAACCATATATTCTGAAGGCCAATGCTCTCATTCTCCTTGAAAAATATGACATGGCAAAGGATATTATTCTTTCTGGCCTTCAAATTGACCCTCTAAGCAATCCTCTTCAGGCTTCTCTTCAGACGTTGGAGAGAATAGCTGTGAGTATGATGGGAAGGGGACGCCAAGGGCTACCAGATCGTACTGACGACTTTGATTGCACCCTTTGTCTTAAGCTTCTTTATGAACCCATCACAACTCCTTGTGGGCATTCCTTTTGCCGTTCTTGCTTATTTCAGTCCATGGATCGTGGTAATAAATGTCCCCTGTGCCGAACAGTTCTCTTTATCAGTTCGAGAACATGTGCAATCAGTGTTACACTGAGCAACATTATACAAAAGAACTTCCCAGAGGAGTATGCTGAAAGGAAGTCAGAAAATGATGGTTTGACAAATTTAGGTGTCGATTTAATGCCTCTTTTTGTCATGGATGTTGTTATCCCCTGTCAGAAATTTCCACTCCACATATTTGAACCCCGCTACAGACTTATGGTCAGGAGGGTAATGGAAGGAAATCATCGTATGGGAATGGTTATTGTGGATTCTACCACTGGTTCTGTTGCTGATTTTGCATGTGAAGTGGAAATTACCGAGTGTGAGCCACTTCCAGACGGACGTTTCTATCTAGAGATTGAAAGTCGTCGAAGATTTCGCATTATTAGATCTTGGGACCAAGATGGGTATCGAGTGGCAGAGATCGAATGGGTCAGTGATGTAATTCCCCCAGAAGGGACAAGAGAACTGGCAGAATTGCAGGAGATGACAAATAATGCAGCAGATTACGCTAGGTCATGGATAAGGAGGGCAAAAGAAGCATCTAGACGAGATCCCAGAAGACATGATAAACTTCTTAACGTGGAAGCAATGATGCCCTCATCACGAGATCCTGAACGGTTTAGCTTCTGGCTTGCTACCCTCTCAAATCGGAGGCCCCTGGAAAGATTAGAACTTTTACAAATGACAGATACAAGTGAGAGGATAAGGCGTGGACTTGTATATCTCAAAGCAGAAGAACAGGGCTGTCAGATGCAAACAGCTGTAATCTCTGCTGCGGCCATGGGGGGAGAAATTTCTAGGGCACCACGCCCTCGAATCCCCTTCTCCTCCCTTTTCATGTTGTCCCTGTTCTTGATCTGCATCACCTCTGCGAAAAAACCGCCCTTCGATTCCTTCACCCCCGGCGACGTTTATTTGATCGACTGTGGCTCGCCGGAGCATACCCGTCTCGACGACGGCCGCATTTTCAAATCCGATCGCGAATCCACCTCCCTCCTTTCCACAGAAGAAGATGTTCAGATCTCCGTCGATTCCATTCCCCCAAACGCCACCGTTTCGCCTCTGTTCTCTTGGTCCTTGCCCCTGTTCCGCTCCGCCAGAATCTTCACCGGCGATTCCATCTACACTTTCTTCATTTCTCAGACCGGCCGCCATTGGATCCGCCTCTACTTCTTCCCTCTCCCAAACCCAAATTACAATCTCTCCGATTCCGTTTTCTCCGTCACCACAGACAATTTCGTCCTCCTCCATGATTTCTCCATCAAGGACAACTCCAAATTGGTTTTCAGAGAGTATCTAATCAATATAACTACCGATAGATTCTCCCTTCAATTCAAACCCAAGAAGAATTCGTGTGCGTTCATCAACGCCATCGAAATCGTCTCCGCCCCAGATCCTCTGTTTTCCGATACCGCCACCTCTGTTTCTCCGGTGGGATTCTTTAACGGATTGTCGAATTACGCTTTCGAAATTTGCTACCGCGTTAACGTGGGAGGGCCAGAGATCGTTCCTAAGAACGATACGCTGTCTAGAACATGGGAGACTGACGCTGCTTACAACAAATTCCCACAGGGTTCTAAGAATGTCTCTGTTTCTCCGAGCGCCATTAAATACCCGGGAAAGGAAGTGACTCCATTGATTGCTCCCAATTGGGTTTATGCAACTGCGCAGGATATGCAAGATTCCAAAACAATGCAACAGAACTTCAATTTGACTTGGAGTTTTGATGTGGGCCAGAGTTACTCTTATTTGATCAGACTCCATTTCTGTGACATTGTGAGCAAAGTTCTCAATAGTCTGTACTTCGATGTATACGTCAATGGGATGATGGGTATCGCAGATCTTGATCTCTCTCAGATAAACGGTGCTCTTTCCACTCCCTACTATAAAGATCTCGTCGTCAATGCCTCCGACATCGAAAACAACACCATCGTGATTCAGGTTGGGCCGTCTAATATGGATTCAGGCATTCAAGACGCGATCCTCAATGGGGTGGAGATCATGAAGCTAAGCAACGATGCTGGGAGCTTGGATGGGTTGTTTTCAGTGGATGGGACATACATGGGAGCCTCAAAATTCATGGCAATGAAGATTGTTGCCATTGTGGGTCTTGGCGTTGGAGTGGCAGCGGCTCTGTTTCTTGCAGTGGTGATCTTCAGATGGCAGAGAAGGCCCCAAGGATGGGAGAAGAGGAACAGCTTCTCATCATGGCTGCTCCCATTACAATCAACCAAAAATTCAAGCTTCTTCTCAAGCAAAAGCAGCTCCAGAAGATCAAGCGTTTTCGGGTCTCGAAGGAGCAAGGCTGGTTTCTCAGGCATCTACACCAACGTGGGCCTTGGCCGTTTCTTCTCCCTCAACGAGTTACAAGTTGCCACTGGGAATTTCGTTGAGAAAGCAGTGATCGGCGTTGGTGGGTTTGGAAAAGTGTACGTTGGAGCATTGGAAGATGGAACGAAAGTGGCTATTAAACGTGGGAACCCAAGTTCAGACCAAGGAATTAACGAGTTCAGAACAGAGATCGAAATGCTCTCAAAGCTCCGCCATCGCCATCTGGTTTCTCTAATTGGGTACTGCGACGAGCAATCGGAGATGATTCTGGTTTACGAGTACATGGCCAATGGCCCATTTCGCGACCACTTGTACGGCTCGAATCTGCCTCCATTGTCGTGGAAACAGAGGCTCGAAATCTGCATAGGCGCAGCCCGTGGGCTGCACTATCTCCACACTGGTGCGGCTCAGGGCATAATCCACCGTGATGTCAAGACCACCAACATTCTTCTTGACGACAATTTTGTGGCCAAAGTTGCTGATTTTGGGCTTTCAAAGGCTGCACCATCGTTGGAACAGACCCACGTCAGCACAGCAGTGAAAGGAAGCTTTGGCTACCTCGATCCGGAGTACTTTAGAAGGCAACAGTTGACTGACAAATCTGATGTTTACTCCTTTGGGGTTGTTCTTTTCGAGGTTCTATGCGCGAGACAAGTCATAAATCCAAAGTTGCCGAGGGAGCAGGTGAGTTTGGCGGAGTGGGCAATGCAGAATTATAGAAAAGGAACACTAGAGAAGATAGTTGATCCCCAAATCAGCAGCTCAATAATAGAGGGTTCACTGAAGATATTTGTGGAAGCAGCAGAGAAATGCTTAGCTGAATATGGGGTGGATAGGCCGAGCATGGGAGATGTGCTATGGAACTTAGAATACGCTCTGCAACTACAAGAGGCGGTGTCAGAGATTGACAATGACCCTGAGGAAGACAAGTGCGAAGGCCTCGGGGCTTTGGACAAACCAAATCAAAGCCAACCAAAAGAAGATCAAGAAGCAACTCCTTCTGTCACTGATGATAATTCTGAAGTCTCAGTTAGTGCTCCTCTGTTTCCCGAGCTTCAAAATTTTCAGGGAAGATGA | 4107 | 46.6 | MAEPSSSLPMDSLGDIDDYIWANEGEGSLPWDMFSHVFEFVQKGNQAFRDSHFEEAIKYYSRANNIKPGDPVILNNRSAAYIRVSQYLKDRPPSASEYRPLNGLDPTIHAELALKDAEKLMDLCSKSVKPYILKANALILLEKYDMAKDIILSGLQIDPLSNPLQASLQTLERIAVSMMGRGRQGLPDRTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRTVLFISSRTCAISVTLSNIIQKNFPEEYAERKSENDGLTNLGVDLMPLFVMDVVIPCQKFPLHIFEPRYRLMVRRVMEGNHRMGMVIVDSTTGSVADFACEVEITECEPLPDGRFYLEIESRRRFRIIRSWDQDGYRVAEIEWVSDVIPPEGTRELAELQEMTNNAADYARSWIRRAKEASRRDPRRHDKLLNVEAMMPSSRDPERFSFWLATLSNRRPLERLELLQMTDTSERIRRGLVYLKAEEQGCQMQTAVISAAAMGGEISRAPRPRIPFSSLFMLSLFLICITSAKKPPFDSFTPGDVYLIDCGSPEHTRLDDGRIFKSDRESTSLLSTEEDVQISVDSIPPNATVSPLFSWSLPLFRSARIFTGDSIYTFFISQTGRHWIRLYFFPLPNPNYNLSDSVFSVTTDNFVLLHDFSIKDNSKLVFREYLINITTDRFSLQFKPKKNSCAFINAIEIVSAPDPLFSDTATSVSPVGFFNGLSNYAFEICYRVNVGGPEIVPKNDTLSRTWETDAAYNKFPQGSKNVSVSPSAIKYPGKEVTPLIAPNWVYATAQDMQDSKTMQQNFNLTWSFDVGQSYSYLIRLHFCDIVSKVLNSLYFDVYVNGMMGIADLDLSQINGALSTPYYKDLVVNASDIENNTIVIQVGPSNMDSGIQDAILNGVEIMKLSNDAGSLDGLFSVDGTYMGASKFMAMKIVAIVGLGVGVAAALFLAVVIFRWQRRPQGWEKRNSFSSWLLPLQSTKNSSFFSSKSSSRRSSVFGSRRSKAGFSGIYTNVGLGRFFSLNELQVATGNFVEKAVIGVGGFGKVYVGALEDGTKVAIKRGNPSSDQGINEFRTEIEMLSKLRHRHLVSLIGYCDEQSEMILVYEYMANGPFRDHLYGSNLPPLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDDNFVAKVADFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARQVINPKLPREQVSLAEWAMQNYRKGTLEKIVDPQISSSIIEGSLKIFVEAAEKCLAEYGVDRPSMGDVLWNLEYALQLQEAVSEIDNDPEEDKCEGLGALDKPNQSQPKEDQEATPSVTDDNSEVSVSAPLFPELQNFQGR | 1368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1654735 | 1670317 | + | MC06g0204 | Mch6g0255 | 689702 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0255 | 1368 | CDD | STKc_IRAK | 1035 | 1300 | - | - | |
Mch6g0255 | 1368 | Pfam | ATP-dependent protease La (LON) substrate-binding domain | 279 | 476 | IPR003111 | - | |
Mch6g0255 | 1368 | FunFam | Putative receptor-like protein kinase | 537 | 697 | - | - | |
Mch6g0255 | 1368 | SMART | ring_2 | 195 | 232 | IPR001841 | - | |
Mch6g0255 | 1368 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1105 | 1322 | - | - | |
Mch6g0255 | 1368 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1149 | 1161 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0255 | 1368 | SUPERFAMILY | TPR-like | 39 | 171 | IPR011990 | GO:0005515(InterPro) | |
Mch6g0255 | 1368 | Gene3D | - | 536 | 697 | - | - | |
Mch6g0255 | 1368 | Gene3D | - | 720 | 905 | - | - | |
Mch6g0255 | 1368 | ProSiteProfiles | Zinc finger RING-type profile. | 195 | 233 | IPR001841 | - | |
Mch6g0255 | 1368 | ProSiteProfiles | Lon N-terminal domain profile. | 276 | 479 | IPR003111 | - | |
Mch6g0255 | 1368 | Pfam | Malectin-like domain | 540 | 902 | IPR024788 | - | |
Mch6g0255 | 1368 | ProSiteProfiles | Protein kinase domain profile. | 1029 | 1302 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0255 | 1368 | SMART | serkin_6 | 1029 | 1302 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0255 | 1368 | ProSitePatterns | Zinc finger RING-type signature. | 210 | 219 | IPR017907 | - | |
Mch6g0255 | 1368 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1035 | 1057 | IPR017441 | GO:0005524(InterPro) | |
Mch6g0255 | 1368 | Pfam | Zinc finger, C3HC4 type (RING finger) | 195 | 232 | - | - | |
Mch6g0255 | 1368 | ProSiteProfiles | TPR repeat profile. | 37 | 70 | IPR019734 | GO:0005515(InterPro) | |
Mch6g0255 | 1368 | Gene3D | Phosphorylase Kinase; domain 1 | 1001 | 1104 | - | - | |
Mch6g0255 | 1368 | SUPERFAMILY | Protein kinase-like (PK-like) | 1004 | 1300 | IPR011009 | - | |
Mch6g0255 | 1368 | FunFam | Receptor-like protein kinase FERONIA | 1105 | 1319 | - | - | |
Mch6g0255 | 1368 | FunFam | receptor-like protein kinase FERONIA | 993 | 1104 | - | - | |
Mch6g0255 | 1368 | Pfam | Protein tyrosine and serine/threonine kinase | 1033 | 1239 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0255 | 1368 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 184 | 274 | IPR013083 | - | |
Mch6g0255 | 1368 | FunFam | Receptor-like protein kinase FERONIA | 721 | 905 | - | - | |
Mch6g0255 | 1368 | SUPERFAMILY | PUA domain-like | 279 | 475 | IPR015947 | - | |
Mch6g0255 | 1368 | PANTHER | RING FINGER PROTEIN 127 | 36 | 476 | - | GO:0061630(PANTHER) | |
Mch6g0255 | 1368 | SUPERFAMILY | RING/U-box | 188 | 256 | - | - | |
Mch6g0255 | 1368 | SMART | tpr_5 | 128 | 161 | IPR019734 | GO:0005515(InterPro) | |
Mch6g0255 | 1368 | SMART | tpr_5 | 37 | 70 | IPR019734 | GO:0005515(InterPro) | |
Mch6g0255 | 1368 | SMART | lon_5 | 278 | 477 | IPR003111 | - | |
Mch6g0255 | 1368 | MobiDBLite | consensus disorder prediction | 1313 | 1368 | - | - | |
Mch6g0255 | 1368 | CDD | RING-HC_LONFs_rpt2 | 192 | 236 | - | - | |
Mch6g0255 | 1368 | Gene3D | Tetratricopeptide repeat domain | 35 | 178 | IPR011990 | GO:0005515(InterPro) | |
Mch6g0255 | 1368 | MobiDBLite | consensus disorder prediction | 1336 | 1368 | - | - | |
Mch6g0255 | 1368 | Gene3D | - | 278 | 379 | IPR046336 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1106 | Mch-Chr11:7731521 | Mch6g0255 | Mch-Chr6:1654735 | 9.10E-273 | dispersed | |
Mch1g2097 | Mch-Chr1:20336445 | Mch6g0255 | Mch-Chr6:1654735 | 1.37E-201 | dispersed | |
Mch2g0950 | Mch-Chr2:6409779 | Mch6g0255 | Mch-Chr6:1654735 | 8.52E-241 | dispersed | |
Mch2g1276 | Mch-Chr2:8902422 | Mch6g0255 | Mch-Chr6:1654735 | 7.56E-147 | dispersed | |
Mch6g0255 | Mch-Chr6:1654735 | Mch8g2954 | Mch-Chr8:32248067 | 5.18E-177 | dispersed | |
Mch6g0255 | Mch-Chr6:1654735 | Mch9g0371 | Mch-Chr9:2752302 | 3.11E-301 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77457 | PF12819 | Malectin_like | 3.50E-35 | CL0202 | Mch | PK |
Pathway information
