Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0255 ATGGCCGAGCCTTCGTCGAGTCTGCCCATGGATTCTCTCGGCGACATCGACGACTACATTTGGGCCAATGAAGGAGAGGGCTCATTGCCATGGGACATGTTTAGTCATGTTTTTGAATTTGTGCAAAAAGGGAATCAAGCATTTAGAGATAGTCACTTTGAAGAGGCGATCAAATATTACTCGAGAGCTAATAACATCAAACCAGGTGATCCAGTTATTCTCAACAATAGAAGTGCTGCTTATATCAGGGTTAGTCAATATCTGAAAGACAGACCACCATCTGCTTCTGAATATCGACCTTTGAATGGGTTGGATCCTACAATACATGCTGAACTGGCTCTAAAAGATGCTGAGAAGCTGATGGACCTATGCAGTAAATCAGTGAAACCATATATTCTGAAGGCCAATGCTCTCATTCTCCTTGAAAAATATGACATGGCAAAGGATATTATTCTTTCTGGCCTTCAAATTGACCCTCTAAGCAATCCTCTTCAGGCTTCTCTTCAGACGTTGGAGAGAATAGCTGTGAGTATGATGGGAAGGGGACGCCAAGGGCTACCAGATCGTACTGACGACTTTGATTGCACCCTTTGTCTTAAGCTTCTTTATGAACCCATCACAACTCCTTGTGGGCATTCCTTTTGCCGTTCTTGCTTATTTCAGTCCATGGATCGTGGTAATAAATGTCCCCTGTGCCGAACAGTTCTCTTTATCAGTTCGAGAACATGTGCAATCAGTGTTACACTGAGCAACATTATACAAAAGAACTTCCCAGAGGAGTATGCTGAAAGGAAGTCAGAAAATGATGGTTTGACAAATTTAGGTGTCGATTTAATGCCTCTTTTTGTCATGGATGTTGTTATCCCCTGTCAGAAATTTCCACTCCACATATTTGAACCCCGCTACAGACTTATGGTCAGGAGGGTAATGGAAGGAAATCATCGTATGGGAATGGTTATTGTGGATTCTACCACTGGTTCTGTTGCTGATTTTGCATGTGAAGTGGAAATTACCGAGTGTGAGCCACTTCCAGACGGACGTTTCTATCTAGAGATTGAAAGTCGTCGAAGATTTCGCATTATTAGATCTTGGGACCAAGATGGGTATCGAGTGGCAGAGATCGAATGGGTCAGTGATGTAATTCCCCCAGAAGGGACAAGAGAACTGGCAGAATTGCAGGAGATGACAAATAATGCAGCAGATTACGCTAGGTCATGGATAAGGAGGGCAAAAGAAGCATCTAGACGAGATCCCAGAAGACATGATAAACTTCTTAACGTGGAAGCAATGATGCCCTCATCACGAGATCCTGAACGGTTTAGCTTCTGGCTTGCTACCCTCTCAAATCGGAGGCCCCTGGAAAGATTAGAACTTTTACAAATGACAGATACAAGTGAGAGGATAAGGCGTGGACTTGTATATCTCAAAGCAGAAGAACAGGGCTGTCAGATGCAAACAGCTGTAATCTCTGCTGCGGCCATGGGGGGAGAAATTTCTAGGGCACCACGCCCTCGAATCCCCTTCTCCTCCCTTTTCATGTTGTCCCTGTTCTTGATCTGCATCACCTCTGCGAAAAAACCGCCCTTCGATTCCTTCACCCCCGGCGACGTTTATTTGATCGACTGTGGCTCGCCGGAGCATACCCGTCTCGACGACGGCCGCATTTTCAAATCCGATCGCGAATCCACCTCCCTCCTTTCCACAGAAGAAGATGTTCAGATCTCCGTCGATTCCATTCCCCCAAACGCCACCGTTTCGCCTCTGTTCTCTTGGTCCTTGCCCCTGTTCCGCTCCGCCAGAATCTTCACCGGCGATTCCATCTACACTTTCTTCATTTCTCAGACCGGCCGCCATTGGATCCGCCTCTACTTCTTCCCTCTCCCAAACCCAAATTACAATCTCTCCGATTCCGTTTTCTCCGTCACCACAGACAATTTCGTCCTCCTCCATGATTTCTCCATCAAGGACAACTCCAAATTGGTTTTCAGAGAGTATCTAATCAATATAACTACCGATAGATTCTCCCTTCAATTCAAACCCAAGAAGAATTCGTGTGCGTTCATCAACGCCATCGAAATCGTCTCCGCCCCAGATCCTCTGTTTTCCGATACCGCCACCTCTGTTTCTCCGGTGGGATTCTTTAACGGATTGTCGAATTACGCTTTCGAAATTTGCTACCGCGTTAACGTGGGAGGGCCAGAGATCGTTCCTAAGAACGATACGCTGTCTAGAACATGGGAGACTGACGCTGCTTACAACAAATTCCCACAGGGTTCTAAGAATGTCTCTGTTTCTCCGAGCGCCATTAAATACCCGGGAAAGGAAGTGACTCCATTGATTGCTCCCAATTGGGTTTATGCAACTGCGCAGGATATGCAAGATTCCAAAACAATGCAACAGAACTTCAATTTGACTTGGAGTTTTGATGTGGGCCAGAGTTACTCTTATTTGATCAGACTCCATTTCTGTGACATTGTGAGCAAAGTTCTCAATAGTCTGTACTTCGATGTATACGTCAATGGGATGATGGGTATCGCAGATCTTGATCTCTCTCAGATAAACGGTGCTCTTTCCACTCCCTACTATAAAGATCTCGTCGTCAATGCCTCCGACATCGAAAACAACACCATCGTGATTCAGGTTGGGCCGTCTAATATGGATTCAGGCATTCAAGACGCGATCCTCAATGGGGTGGAGATCATGAAGCTAAGCAACGATGCTGGGAGCTTGGATGGGTTGTTTTCAGTGGATGGGACATACATGGGAGCCTCAAAATTCATGGCAATGAAGATTGTTGCCATTGTGGGTCTTGGCGTTGGAGTGGCAGCGGCTCTGTTTCTTGCAGTGGTGATCTTCAGATGGCAGAGAAGGCCCCAAGGATGGGAGAAGAGGAACAGCTTCTCATCATGGCTGCTCCCATTACAATCAACCAAAAATTCAAGCTTCTTCTCAAGCAAAAGCAGCTCCAGAAGATCAAGCGTTTTCGGGTCTCGAAGGAGCAAGGCTGGTTTCTCAGGCATCTACACCAACGTGGGCCTTGGCCGTTTCTTCTCCCTCAACGAGTTACAAGTTGCCACTGGGAATTTCGTTGAGAAAGCAGTGATCGGCGTTGGTGGGTTTGGAAAAGTGTACGTTGGAGCATTGGAAGATGGAACGAAAGTGGCTATTAAACGTGGGAACCCAAGTTCAGACCAAGGAATTAACGAGTTCAGAACAGAGATCGAAATGCTCTCAAAGCTCCGCCATCGCCATCTGGTTTCTCTAATTGGGTACTGCGACGAGCAATCGGAGATGATTCTGGTTTACGAGTACATGGCCAATGGCCCATTTCGCGACCACTTGTACGGCTCGAATCTGCCTCCATTGTCGTGGAAACAGAGGCTCGAAATCTGCATAGGCGCAGCCCGTGGGCTGCACTATCTCCACACTGGTGCGGCTCAGGGCATAATCCACCGTGATGTCAAGACCACCAACATTCTTCTTGACGACAATTTTGTGGCCAAAGTTGCTGATTTTGGGCTTTCAAAGGCTGCACCATCGTTGGAACAGACCCACGTCAGCACAGCAGTGAAAGGAAGCTTTGGCTACCTCGATCCGGAGTACTTTAGAAGGCAACAGTTGACTGACAAATCTGATGTTTACTCCTTTGGGGTTGTTCTTTTCGAGGTTCTATGCGCGAGACAAGTCATAAATCCAAAGTTGCCGAGGGAGCAGGTGAGTTTGGCGGAGTGGGCAATGCAGAATTATAGAAAAGGAACACTAGAGAAGATAGTTGATCCCCAAATCAGCAGCTCAATAATAGAGGGTTCACTGAAGATATTTGTGGAAGCAGCAGAGAAATGCTTAGCTGAATATGGGGTGGATAGGCCGAGCATGGGAGATGTGCTATGGAACTTAGAATACGCTCTGCAACTACAAGAGGCGGTGTCAGAGATTGACAATGACCCTGAGGAAGACAAGTGCGAAGGCCTCGGGGCTTTGGACAAACCAAATCAAAGCCAACCAAAAGAAGATCAAGAAGCAACTCCTTCTGTCACTGATGATAATTCTGAAGTCTCAGTTAGTGCTCCTCTGTTTCCCGAGCTTCAAAATTTTCAGGGAAGATGA 4107 46.6 MAEPSSSLPMDSLGDIDDYIWANEGEGSLPWDMFSHVFEFVQKGNQAFRDSHFEEAIKYYSRANNIKPGDPVILNNRSAAYIRVSQYLKDRPPSASEYRPLNGLDPTIHAELALKDAEKLMDLCSKSVKPYILKANALILLEKYDMAKDIILSGLQIDPLSNPLQASLQTLERIAVSMMGRGRQGLPDRTDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRTVLFISSRTCAISVTLSNIIQKNFPEEYAERKSENDGLTNLGVDLMPLFVMDVVIPCQKFPLHIFEPRYRLMVRRVMEGNHRMGMVIVDSTTGSVADFACEVEITECEPLPDGRFYLEIESRRRFRIIRSWDQDGYRVAEIEWVSDVIPPEGTRELAELQEMTNNAADYARSWIRRAKEASRRDPRRHDKLLNVEAMMPSSRDPERFSFWLATLSNRRPLERLELLQMTDTSERIRRGLVYLKAEEQGCQMQTAVISAAAMGGEISRAPRPRIPFSSLFMLSLFLICITSAKKPPFDSFTPGDVYLIDCGSPEHTRLDDGRIFKSDRESTSLLSTEEDVQISVDSIPPNATVSPLFSWSLPLFRSARIFTGDSIYTFFISQTGRHWIRLYFFPLPNPNYNLSDSVFSVTTDNFVLLHDFSIKDNSKLVFREYLINITTDRFSLQFKPKKNSCAFINAIEIVSAPDPLFSDTATSVSPVGFFNGLSNYAFEICYRVNVGGPEIVPKNDTLSRTWETDAAYNKFPQGSKNVSVSPSAIKYPGKEVTPLIAPNWVYATAQDMQDSKTMQQNFNLTWSFDVGQSYSYLIRLHFCDIVSKVLNSLYFDVYVNGMMGIADLDLSQINGALSTPYYKDLVVNASDIENNTIVIQVGPSNMDSGIQDAILNGVEIMKLSNDAGSLDGLFSVDGTYMGASKFMAMKIVAIVGLGVGVAAALFLAVVIFRWQRRPQGWEKRNSFSSWLLPLQSTKNSSFFSSKSSSRRSSVFGSRRSKAGFSGIYTNVGLGRFFSLNELQVATGNFVEKAVIGVGGFGKVYVGALEDGTKVAIKRGNPSSDQGINEFRTEIEMLSKLRHRHLVSLIGYCDEQSEMILVYEYMANGPFRDHLYGSNLPPLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDDNFVAKVADFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARQVINPKLPREQVSLAEWAMQNYRKGTLEKIVDPQISSSIIEGSLKIFVEAAEKCLAEYGVDRPSMGDVLWNLEYALQLQEAVSEIDNDPEEDKCEGLGALDKPNQSQPKEDQEATPSVTDDNSEVSVSAPLFPELQNFQGR 1368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1654735 1670317 + MC06g0204 Mch6g0255 689702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0255 1368 CDD STKc_IRAK 1035 1300 - -
Mch6g0255 1368 Pfam ATP-dependent protease La (LON) substrate-binding domain 279 476 IPR003111 -
Mch6g0255 1368 FunFam Putative receptor-like protein kinase 537 697 - -
Mch6g0255 1368 SMART ring_2 195 232 IPR001841 -
Mch6g0255 1368 Gene3D Transferase(Phosphotransferase) domain 1 1105 1322 - -
Mch6g0255 1368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1149 1161 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0255 1368 SUPERFAMILY TPR-like 39 171 IPR011990 GO:0005515(InterPro)
Mch6g0255 1368 Gene3D - 536 697 - -
Mch6g0255 1368 Gene3D - 720 905 - -
Mch6g0255 1368 ProSiteProfiles Zinc finger RING-type profile. 195 233 IPR001841 -
Mch6g0255 1368 ProSiteProfiles Lon N-terminal domain profile. 276 479 IPR003111 -
Mch6g0255 1368 Pfam Malectin-like domain 540 902 IPR024788 -
Mch6g0255 1368 ProSiteProfiles Protein kinase domain profile. 1029 1302 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0255 1368 SMART serkin_6 1029 1302 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0255 1368 ProSitePatterns Zinc finger RING-type signature. 210 219 IPR017907 -
Mch6g0255 1368 ProSitePatterns Protein kinases ATP-binding region signature. 1035 1057 IPR017441 GO:0005524(InterPro)
Mch6g0255 1368 Pfam Zinc finger, C3HC4 type (RING finger) 195 232 - -
Mch6g0255 1368 ProSiteProfiles TPR repeat profile. 37 70 IPR019734 GO:0005515(InterPro)
Mch6g0255 1368 Gene3D Phosphorylase Kinase; domain 1 1001 1104 - -
Mch6g0255 1368 SUPERFAMILY Protein kinase-like (PK-like) 1004 1300 IPR011009 -
Mch6g0255 1368 FunFam Receptor-like protein kinase FERONIA 1105 1319 - -
Mch6g0255 1368 FunFam receptor-like protein kinase FERONIA 993 1104 - -
Mch6g0255 1368 Pfam Protein tyrosine and serine/threonine kinase 1033 1239 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0255 1368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 274 IPR013083 -
Mch6g0255 1368 FunFam Receptor-like protein kinase FERONIA 721 905 - -
Mch6g0255 1368 SUPERFAMILY PUA domain-like 279 475 IPR015947 -
Mch6g0255 1368 PANTHER RING FINGER PROTEIN 127 36 476 - GO:0061630(PANTHER)
Mch6g0255 1368 SUPERFAMILY RING/U-box 188 256 - -
Mch6g0255 1368 SMART tpr_5 128 161 IPR019734 GO:0005515(InterPro)
Mch6g0255 1368 SMART tpr_5 37 70 IPR019734 GO:0005515(InterPro)
Mch6g0255 1368 SMART lon_5 278 477 IPR003111 -
Mch6g0255 1368 MobiDBLite consensus disorder prediction 1313 1368 - -
Mch6g0255 1368 CDD RING-HC_LONFs_rpt2 192 236 - -
Mch6g0255 1368 Gene3D Tetratricopeptide repeat domain 35 178 IPR011990 GO:0005515(InterPro)
Mch6g0255 1368 MobiDBLite consensus disorder prediction 1336 1368 - -
Mch6g0255 1368 Gene3D - 278 379 IPR046336 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1106 Mch-Chr11:7731521 Mch6g0255 Mch-Chr6:1654735 9.10E-273 dispersed
Mch1g2097 Mch-Chr1:20336445 Mch6g0255 Mch-Chr6:1654735 1.37E-201 dispersed
Mch2g0950 Mch-Chr2:6409779 Mch6g0255 Mch-Chr6:1654735 8.52E-241 dispersed
Mch2g1276 Mch-Chr2:8902422 Mch6g0255 Mch-Chr6:1654735 7.56E-147 dispersed
Mch6g0255 Mch-Chr6:1654735 Mch8g2954 Mch-Chr8:32248067 5.18E-177 dispersed
Mch6g0255 Mch-Chr6:1654735 Mch9g0371 Mch-Chr9:2752302 3.11E-301 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77457 PF12819 Malectin_like 3.50E-35 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0255 - - - 0.0