Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0257 ATGGCGCTGTTCAGAAGGTTATTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGGGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTGCAGAGCTACTTTCCTGATGCTTCTTTCATGGTTTTCAACTTCAGAGAAGGTGATAGGCGAAGCCAAGTTTCTGACATATTAACTCAGTATGACATGACAGTTATGGATTATCCTCGGCAATATGAGGGGTGTCCTTTACTGCCATTGGAGATGATTCACCACTTCCTTCGATCTAGTGAAAGCTGGTTGTCACTGGAGGGTCAACAGAACGTGCTACTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTCTCTCTCCTTTAAACCCTCAACCTTCCCACCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCTGACTGGCCTCCATCTGATACACCTCTAGTTTTGGATTGTATAATACTTAGAGTTCTACCTCTCTTTGATGGGGGAAAAGGTTGTAGGCCTGTTGTGCGTGTTTATGGGCAAGACCCCTCAACACCAGCCAACAGAACTTCAAAGCTTTTATTTTCAACACCAGTCAAGAAGAAACATATCCGCAACTACTTACAGGCAGAGTGTATGCTGGTGAAAATTGACATTCATTGCCGTGTTCAAGGGGACGTGGTTCTTGAATGTATCCATTTGGATGAGGATCTAGTACACGAGGAGATGGTGTTTAGAGTTATGTTTCACACAACATTTGTTAGATCAAACATTATGATTCTGAGCCGTGATGAAGTTGATGTTTTATGGGATGCGAGGGACCAGTTCCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCACGATCTCACCACAGCCTTCGATGATGAAGATGCAAATGAAACAGGAGCTGCCTCTCCTGAAGAATTTTTTGAGGTTGAGGAGATCTTCAGTAATGTAATGGATGGGCAGGAAGTCAAGGGGTCCAATGATCCTCAAGTGGTCAATCGTGTAGACCGTAAAGAAGAATGGAAAGAGGACATGGATCCTCCTGCATTCCAAGATTGTGCATCTGACGATGGAAATCTTAAGCATGATAAGAAATCAGATTTTGATGCAGTGAAGGACATTACTGTGGATGATGTGAAGTACAAACTGGATGAAAATATATACTCTGATCTTAATACAGTTAAGGACATTGCTGTGGATGATGGGGATATCAAGTCGAATTACTTATTGGTTGCTGCTAATGTCCTGACTCATGCGAAAGCCCAGGGGTTGGTAGATGATGCTTGTGAGAAATTTGAAGATATGGAAGAAAAGGACGATGGAAGAGATACCACACCTGAGAAGTTGGACAACAGAGTTCTACAGAAAAAGTTGAGTGCTGATGGCTCTAGACAAAAATCTGAAAGATTGCAAACACCAATCCCCAAGAAACAGCCTACTTCAACTGCAAAACTGACCGCAGATATGGGTTTAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTTTCTGCCAAACAAGCAAAGCCAAATGCAGTTTCTAGGTGGATCCCTCCTAATAAAGGCTCTTATATGAATTCTATGCATGTTTCCTATCCGCCTTCAAGATATAACAGTGCCCCGGCTGCTTTGGCAAGTATTGCACAATCAAAAGATATAAATTCAAATTCCAAAACAAAGGCTGCTGCCAACCTTGATTCTCTGGTTGCTACTGATGCTTTTAGTGAACGGAAAAATTATAAAGTGGATTCTGTAAGTCCTTCATACTCTGCACCTGGGGAACTCATGCTTGGCCCACCATCTCCTGTTGAGCCAATCCAGGAGGCATATTCTTCCTCTCAAACTCTAAAACCATCACATAGTGGTGATCCACAATTTGAAATACCGCCTCCACCCTTGCCCTCACAGCCTCCATCTCCATTACCGCCACCCCCGGGGGCAAATGCCATACCTTCCCCCCCACCACCCCCTTCATCTCATAATGTGGAGTCAACGGACTCTGCTCCACCATTTTCTGTGTCTTTAACACCACCACCCATTGTTAACTCATCAGTTGCAGTGCCTCTCCCTCCCCCTCCCCCTCCATCCAGTAGGCGGAACAATGAGGTGCTCTTGCCCCATCATTCTACACAACAATCATCATGGGAGCAAATCTATTCGGCCGTTTCTACTGTAATGGTGGCTGGTTCTCCACCTCCTCCACCCCCGCCTCTTCCTCCCTCTCCCTACGTGGGCATGCAATCTACATTAAGGAATACTGGAAGTACTTCTGAACTTGTTTTGTCTCCTCCTTTTGCTTCTTTATATAAAGGGCCACCTCCTCCAATGCGTGGGGCTCCACCACCGCCGCCGCCTCCACCAATGTATGGAGCTCCTCCTCCACCAATGCATTCTCCACCACCTCCACCTCCACTAATGCGTGGGCCTCCTCCACCACCGCCACCTCCACCAGTGCATGGGGCTCCTCCACCACCGCCACCTCCACCAGTGCACGGGGCTCCTCCACCACCGCCACCTCCACCAGTGCACGGGGCTCCTCCACCACCGCCACCTCCACCTCTACCAGTGCCTGGGGCTCCTCCACCACCACCTCCAATGCGTGGGGCTCCTCCACCACCCCCACCTCCCATGCGTGGGGCTCCTCCTCCACCTCCCCCACCTGAGAAAGGTGGTGGACCTCCTCCTCCTCCACCACTAGGTGCAAAAGGAGCAAGTGCGCCACCAGACCCAAGAGGTTTGTCTGCTGGAAGAGGGCGTGGGCTATCACGCTCAAGTACTACAGCACCTCGAAGGTCTTCCTTAAAGCCTCTACATTGGAGCAAAGTAACAAGGGCTCTGCAAGGGAGCTTGTGGGAAGAACTGCAAAGATTTGGCGAGCCTCAAATTGCACCAGAGTTTGATGTGTCCGAGATAGAGACACTCTTTTCTGCAACTGTTCCCAAACCTGCTGATAAATCTGGAGGGCGAAGGAAGTCTGCTGGATCCAAAACTGATAAAGTTCACCTGATTGACCTCAGGAGAGCAAACAATACTGAAATTATGCTCACGAAAGTAAAGATGCCACTTGCTGATATGATGGCTGCAGTACTGGCAATGGACGAGTCAGTATTAGATGTTGATCAGGTGGAAAACCTCATAAAGTTTTGTCCTACAAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATAAGGAAAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCGAAGTTGAGAGTATTTTCATTCAAGATTCAGTTCCGCGCTCAGATATCAGAATTTAAGAAGGGTTTAAACACAGTCAACTCTGCATGTGATCAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTACCTGGGGAATACACTGAATCAAGGAACAGCAAGGGGTTCTGCAGTAGGCTTCAAGTTGGATAGCCTTCTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACTCTCATGCATTATCTTTGCAAGGTCCTGGCTTCAAAGACACCAGCTCTTCTTAATTTTCATTTGGACCTGAGTAGCCTTGAGGCAGCAACCAAGATACAATTGAAGTCCTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAAGCAGGAGCTTGTTGCTTCTGAAAGTGATGGCCCAGTTTCTGAAATTTTTCGCAAGACGCTGAAAGAATTCATTTCTCATACTGAGACAGAGGTGGCAACGGTGACAAATCTTTATTCTGTTGTGGGTAGAAATGCAGATGCACTTGCTCTATATTTTGGTGAGGACCCGGCTCGCTGTCCATTTGAGCAGGTTACAGTGACACTATTGAACTTTGTGAGATTATTTCGCAAAGCGCATGAAGAGAATTGCAAACAGGCTGAATTGGAAAAGAAAAAAGCCGTGAAGGATGCTGAGATGGAGAATGCCAAAGGAATTAACCTCACGAAGAAGAGTGTGAAA 4182 46.2 MALFRRLFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSYFPDASFMVFNFREGDRRSQVSDILTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNLGSDWPPSDTPLVLDCIILRVLPLFDGGKGCRPVVRVYGQDPSTPANRTSKLLFSTPVKKKHIRNYLQAECMLVKIDIHCRVQGDVVLECIHLDEDLVHEEMVFRVMFHTTFVRSNIMILSRDEVDVLWDARDQFPKDFRVEALFLDADAVVHDLTTAFDDEDANETGAASPEEFFEVEEIFSNVMDGQEVKGSNDPQVVNRVDRKEEWKEDMDPPAFQDCASDDGNLKHDKKSDFDAVKDITVDDVKYKLDENIYSDLNTVKDIAVDDGDIKSNYLLVAANVLTHAKAQGLVDDACEKFEDMEEKDDGRDTTPEKLDNRVLQKKLSADGSRQKSERLQTPIPKKQPTSTAKLTADMGLAKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYMNSMHVSYPPSRYNSAPAALASIAQSKDINSNSKTKAAANLDSLVATDAFSERKNYKVDSVSPSYSAPGELMLGPPSPVEPIQEAYSSSQTLKPSHSGDPQFEIPPPPLPSQPPSPLPPPPGANAIPSPPPPPSSHNVESTDSAPPFSVSLTPPPIVNSSVAVPLPPPPPPSSRRNNEVLLPHHSTQQSSWEQIYSAVSTVMVAGSPPPPPPPLPPSPYVGMQSTLRNTGSTSELVLSPPFASLYKGPPPPMRGAPPPPPPPPMYGAPPPPMHSPPPPPPLMRGPPPPPPPPPVHGAPPPPPPPPVHGAPPPPPPPPVHGAPPPPPPPPLPVPGAPPPPPPMRGAPPPPPPPMRGAPPPPPPPEKGGGPPPPPPLGAKGASAPPDPRGLSAGRGRGLSRSSTTAPRRSSLKPLHWSKVTRALQGSLWEELQRFGEPQIAPEFDVSEIETLFSATVPKPADKSGGRRKSAGSKTDKVHLIDLRRANNTEIMLTKVKMPLADMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFRAQISEFKKGLNTVNSACDQVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLSSLEAATKIQLKSLAEEMQAIIKGLEKVKQELVASESDGPVSEIFRKTLKEFISHTETEVATVTNLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKQAELEKKKAVKDAEMENAKGINLTKKSVK 1394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1676940 1691293 - MC06g0205 Mch6g0257 689704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0257 1394 MobiDBLite consensus disorder prediction 721 741 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 786 996 - -
Mch6g0257 1394 SUPERFAMILY Formin homology 2 domain (FH2 domain) 942 1374 - -
Mch6g0257 1394 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Mch6g0257 1394 Gene3D Protein tyrosine phosphatase superfamily 14 206 IPR029021 -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 788 803 - -
Mch6g0257 1394 SMART it6_source 691 1392 IPR015425 -
Mch6g0257 1394 CDD PTP_PTEN-like 16 190 - -
Mch6g0257 1394 Gene3D Formin, FH2 domain 982 1368 IPR042201 -
Mch6g0257 1394 ProSiteProfiles Formin homology-2 (FH2) domain profile. 984 1382 IPR015425 -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 632 774 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 516 542 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 684 720 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 666 681 - -
Mch6g0257 1394 Coils Coil 1357 1384 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 979 993 - -
Mch6g0257 1394 Coils Coil 1263 1287 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 743 759 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 827 964 - -
Mch6g0257 1394 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Mch6g0257 1394 Gene3D - 207 336 - -
Mch6g0257 1394 SMART PTEN_C2_2 198 338 IPR014020 -
Mch6g0257 1394 FunFam Formin-like protein 983 1368 - -
Mch6g0257 1394 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Mch6g0257 1394 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Mch6g0257 1394 Pfam Formin Homology 2 Domain 987 1356 IPR015425 -
Mch6g0257 1394 PANTHER FORMIN-J 894 1381 IPR051144 -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 805 822 - -
Mch6g0257 1394 MobiDBLite consensus disorder prediction 524 542 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0505 Mch-Chr11:3197963 Mch6g0257 Mch-Chr6:1676940 6.03E-287 dispersed
Mch6g0257 Mch-Chr6:1676940 Mch6g0629 Mch-Chr6:4253783 5.38E-287 dispersed
Mch6g0257 Mch-Chr6:1676940 Mch6g0258 Mch-Chr6:1701803 3.76E-218 tandem
Mch3g1721 Mch-Chr3:18729607 Mch6g0257 Mch-Chr6:1676940 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0257 K28090 - csv:101215105 1261.9