Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g0285 | ATGGAATATTTTTCTCTCGTCGCCGCCGCGGTAACCTTGGCGTCGGCCGTGATTCTGTACCGCGTCCTCTTCCTCCGCCGCAGCTTCCGCTCCCTCCGCCTTCCGCCGGGGCCAAAACCATGGCCGATCGTCGGAAACTTGCCTCACATTGGCCGAGCGCCTCTCCACTCTCACCTCGCCGCCATGGCCGGCAAGTACGGACCTCTCATTTACCTCCGGCTCGGCTCCGTCGACGTCGTCGTGGCTGCGTCGGCGGCGGTGGCGGAACAATTCTTAAAGCTTCACGACACTAATTTCTTGAGCCGGCCGCCGAACGCCGGCGCTAAGTATATCGCTTATAACTACCAGGATTTGGTGTTCGCGCCGTACGGTCCGCGGTGGCGGTTGCTCCGGAAGATCAGCGCCGTCCATCTGTTCTCCACCAAAGCCATGGATGCTCATCGGCGCGTTCGCGAGGAGGAGGTGGTGGTGCTAGTTGGAGCCGTCGCAAGGGCCGGCGGAGCACCGGCGACTTTGGGAAGCTTGCTCACCATCTGCACCGCCAACGCCCTCGGCCGGACGATGATCGGCCGCCGTGTTTTTGGCGGCGCCGATCCGAAGGTCGAACGGTTCAAGTCGATGGTGGAGCAAGTAATGCTGCTGTCCGGTAAGTTCAACGCCGGCGACTTTTTTCCGTCGCTCGAGCGGCTGGATTTGCAGGGCGTGGCCGGCGAGATGAAGAAGGTCCACCGGTGGTTCGACGATTTCTTGACGGAGATTTTAGAGGAGCGGCGGATGGGCGGCGACGGCGGGCAGCACGATGACTTGCTGAGCACGCTTCTGTTCTCGCAGGATGGAGCTGATGATGAGAACGAGAAGCTTAATGACACTGAGATCAAGGCCTTGTTGTTGAACATGTTTACGGCTGGAACTGACACGTCAGCGAGTACAGTAGAGTGGGCCATGGCAGAGCTTATAAGGCACCCCAAAATGTTGGCCCAGGCCCAACTGGAACTGGACTCCGTCGTGGGCCGTGATCGGCTAGTTTCCGATCTGGACCTTCCACAACTGGGCTATCTCCAGGCGGTGGTGAAGGAAACATTCCGGCTCCACCCACCGACGCCGCTCTCCCTCCCCCGCATGGCCGCCGACAGCTGCCAGATCAACGGCTACCAGATCCCCAAAGGCTCCACGCTCCTCGTCGATATATGGGCCATTGGTCGTGATCCAAACGAATGGGCCGGCCCACTAGAGTTCAGGCCAGATAGGTTCCTTCCCGGCGGCGAGAAGGTCCACGTCGATGTCAGAGGAAATAACTTTGAGGCTATTCCGTTTGGGGCTGGGCGGAGGATTTGCGTGGGAATGGCCTTGGGCCTGAGGATGGTCCAGCTTCTAACTGCGACATTGGTCCACTCCTTTGATTGGGTCTTGACCAATGGGCTTTCGCCGGATAAGCTGAACATGGACGAGGCCTTTGGGCTGACTCTGCGTCGGGCCCAGCCCTTGGTTATGCATCCGCGGCCCAGACTCTCCCCGGACGTTTATCAAGGGTTGCCTTTAATTAATTAG | 1548 | 59.43 | MEYFSLVAAAVTLASAVILYRVLFLRRSFRSLRLPPGPKPWPIVGNLPHIGRAPLHSHLAAMAGKYGPLIYLRLGSVDVVVAASAAVAEQFLKLHDTNFLSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKISAVHLFSTKAMDAHRRVREEEVVVLVGAVARAGGAPATLGSLLTICTANALGRTMIGRRVFGGADPKVERFKSMVEQVMLLSGKFNAGDFFPSLERLDLQGVAGEMKKVHRWFDDFLTEILEERRMGGDGGQHDDLLSTLLFSQDGADDENEKLNDTEIKALLLNMFTAGTDTSASTVEWAMAELIRHPKMLAQAQLELDSVVGRDRLVSDLDLPQLGYLQAVVKETFRLHPPTPLSLPRMAADSCQINGYQIPKGSTLLVDIWAIGRDPNEWAGPLEFRPDRFLPGGEKVHVDVRGNNFEAIPFGAGRRICVGMALGLRMVQLLTATLVHSFDWVLTNGLSPDKLNMDEAFGLTLRRAQPLVMHPRPRLSPDVYQGLPLIN | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1880183 | 1884606 | + | MC06g0226 | Mch6g0285 | 689732 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g0285 | 515 | Gene3D | Cytochrome P450 | 28 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | Pfam | Cytochrome P450 | 35 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PANTHER | CYTOCHROME P450 98A9 | 5 | 509 | - | - | |
| Mch6g0285 | 515 | FunFam | Cytochrome P450 82C4 | 26 | 499 | - | - | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 395 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 354 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch6g0285 | 515 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0285 | 515 | SUPERFAMILY | Cytochrome P450 | 35 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g0285 | Mch-Chr6:1880183 | Mch8g1025 | Mch-Chr8:7237681 | 9.14E-131 | dispersed | |
| Mch6g0285 | Mch-Chr6:1880183 | Mch3g1399 | Mch-Chr3:16503374 | 2.18E-112 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch6g0285 | K05280 | - | csv:101207160 | 748.043 |