Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0285 ATGGAATATTTTTCTCTCGTCGCCGCCGCGGTAACCTTGGCGTCGGCCGTGATTCTGTACCGCGTCCTCTTCCTCCGCCGCAGCTTCCGCTCCCTCCGCCTTCCGCCGGGGCCAAAACCATGGCCGATCGTCGGAAACTTGCCTCACATTGGCCGAGCGCCTCTCCACTCTCACCTCGCCGCCATGGCCGGCAAGTACGGACCTCTCATTTACCTCCGGCTCGGCTCCGTCGACGTCGTCGTGGCTGCGTCGGCGGCGGTGGCGGAACAATTCTTAAAGCTTCACGACACTAATTTCTTGAGCCGGCCGCCGAACGCCGGCGCTAAGTATATCGCTTATAACTACCAGGATTTGGTGTTCGCGCCGTACGGTCCGCGGTGGCGGTTGCTCCGGAAGATCAGCGCCGTCCATCTGTTCTCCACCAAAGCCATGGATGCTCATCGGCGCGTTCGCGAGGAGGAGGTGGTGGTGCTAGTTGGAGCCGTCGCAAGGGCCGGCGGAGCACCGGCGACTTTGGGAAGCTTGCTCACCATCTGCACCGCCAACGCCCTCGGCCGGACGATGATCGGCCGCCGTGTTTTTGGCGGCGCCGATCCGAAGGTCGAACGGTTCAAGTCGATGGTGGAGCAAGTAATGCTGCTGTCCGGTAAGTTCAACGCCGGCGACTTTTTTCCGTCGCTCGAGCGGCTGGATTTGCAGGGCGTGGCCGGCGAGATGAAGAAGGTCCACCGGTGGTTCGACGATTTCTTGACGGAGATTTTAGAGGAGCGGCGGATGGGCGGCGACGGCGGGCAGCACGATGACTTGCTGAGCACGCTTCTGTTCTCGCAGGATGGAGCTGATGATGAGAACGAGAAGCTTAATGACACTGAGATCAAGGCCTTGTTGTTGAACATGTTTACGGCTGGAACTGACACGTCAGCGAGTACAGTAGAGTGGGCCATGGCAGAGCTTATAAGGCACCCCAAAATGTTGGCCCAGGCCCAACTGGAACTGGACTCCGTCGTGGGCCGTGATCGGCTAGTTTCCGATCTGGACCTTCCACAACTGGGCTATCTCCAGGCGGTGGTGAAGGAAACATTCCGGCTCCACCCACCGACGCCGCTCTCCCTCCCCCGCATGGCCGCCGACAGCTGCCAGATCAACGGCTACCAGATCCCCAAAGGCTCCACGCTCCTCGTCGATATATGGGCCATTGGTCGTGATCCAAACGAATGGGCCGGCCCACTAGAGTTCAGGCCAGATAGGTTCCTTCCCGGCGGCGAGAAGGTCCACGTCGATGTCAGAGGAAATAACTTTGAGGCTATTCCGTTTGGGGCTGGGCGGAGGATTTGCGTGGGAATGGCCTTGGGCCTGAGGATGGTCCAGCTTCTAACTGCGACATTGGTCCACTCCTTTGATTGGGTCTTGACCAATGGGCTTTCGCCGGATAAGCTGAACATGGACGAGGCCTTTGGGCTGACTCTGCGTCGGGCCCAGCCCTTGGTTATGCATCCGCGGCCCAGACTCTCCCCGGACGTTTATCAAGGGTTGCCTTTAATTAATTAG 1548 59.43 MEYFSLVAAAVTLASAVILYRVLFLRRSFRSLRLPPGPKPWPIVGNLPHIGRAPLHSHLAAMAGKYGPLIYLRLGSVDVVVAASAAVAEQFLKLHDTNFLSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKISAVHLFSTKAMDAHRRVREEEVVVLVGAVARAGGAPATLGSLLTICTANALGRTMIGRRVFGGADPKVERFKSMVEQVMLLSGKFNAGDFFPSLERLDLQGVAGEMKKVHRWFDDFLTEILEERRMGGDGGQHDDLLSTLLFSQDGADDENEKLNDTEIKALLLNMFTAGTDTSASTVEWAMAELIRHPKMLAQAQLELDSVVGRDRLVSDLDLPQLGYLQAVVKETFRLHPPTPLSLPRMAADSCQINGYQIPKGSTLLVDIWAIGRDPNEWAGPLEFRPDRFLPGGEKVHVDVRGNNFEAIPFGAGRRICVGMALGLRMVQLLTATLVHSFDWVLTNGLSPDKLNMDEAFGLTLRRAQPLVMHPRPRLSPDVYQGLPLIN 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1880183 1884606 + MC06g0226 Mch6g0285 689732
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0285 515 Gene3D Cytochrome P450 28 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PANTHER CYTOCHROME P450 98A9 5 509 - -
Mch6g0285 515 FunFam Cytochrome P450 82C4 26 499 - -
Mch6g0285 515 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch6g0285 515 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0285 515 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0285 Mch-Chr6:1880183 Mch8g1025 Mch-Chr8:7237681 9.14E-131 dispersed
Mch6g0285 Mch-Chr6:1880183 Mch3g1399 Mch-Chr3:16503374 2.18E-112 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0285 K05280 - csv:101207160 748.043