Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0306 ATGGAAGTTAATACCTACACTGATTCATTGCACAAGATTCTCTTTCAAAGGGAATGCTACTCGACTCGACAGCAACGAATTGTACTCTTAGCACTTCTAATCTTTACAGCTTTCTGTTCAACTGGGGCTTACGACCCGCTGGATCCAGATGGAAACATAACAATCAAATGGGATGTAGTCTCTTGGACGGCAGACGGATATGTTGCTGTGGTGACAATGAACAATTTTCAGATGTACCGGCATATCAATGCACCAGGATGGACTCTAGCCTGGTCATGGGCCAAGAAAGAAGTAATATGGTCTATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAATGTCCCTCACTGTTGCAAGAAAACCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAACCAGCAATTCTCCAACTGCTGCAAGGGTGGAGTATTGGCATCTTGGGGACAGGATCCTGTAGGTTCAGTCGCGGCCTTTCAGGTGAGTGTTGGGCTAGCCGGTACTTCGAACAAAACTGTAAAATTGCCAAAGAATTTTACTCTGCTCGGTCCGGGACCAGGCTACACTTGTGGACCTGCAAAGATTGTGCCTTCGACAGTCTTCCTCACTCCCGATCGTCGGCGGAAAACTCAAGCATTGATGACCTGGAATGTGACCTGCACTTATTCACAATTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTCTCAACTTTCTATAACGATACGATCACTTCTTGCCCAACCTGTTCGTGCGGCTGCCAGAACAAACATAATTGTATAAAGAGTGACTCAAAGCTACTGCACAAGGATGGGATAAACACTCCTAAAAAGGATAATACACCCTTACTACAATGCACCCATCACATGTGTCCTATTCGAGTACACTGGCACGTAAAGCTTAATTACAAGGATTACTGGCGTGTGAAGATTGCCGTAACAAACTTTAACTATAGGATGAACTATACGCTGTGGACACTGGCAGTGCAGCATCCAAATCTTAACAATGTAACTCAAGTCTTCAGTTTTGACTACAAACCCCTAGTTCCCTATGAATCCATCAATGATACTGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGAGCATTTGGAAACGTGCAATCTGAAGTACTCATGAAGAAGGACAAGGATACTTTTACCTTCAAGCAGGGCTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGCCAGATGCCGCCACCAGAATCATACCCATTTCTACCCAACTCTGCTCCTGCAGACTCCAGTGCAGTTGCCAAATTGATCACCTCCTTGCTTTTGATACTCTGGCTCTTTTGGTGA 1371 44.78 MEVNTYTDSLHKILFQRECYSTRQQRIVLLALLIFTAFCSTGAYDPLDPDGNITIKWDVVSWTADGYVAVVTMNNFQMYRHINAPGWTLAWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVAAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCSCGCQNKHNCIKSDSKLLHKDGINTPKKDNTPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGAFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPADSSAVAKLITSLLLILWLFW 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2022991 2029395 - MC06g0246 Mch6g0306 689753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0306 456 Pfam COBRA-like protein 67 230 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Mch6g0306 456 PANTHER PROTEIN COBRA 31 450 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Mch6g0306 456 PIRSF COBRA 16 456 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0306 Mch-Chr6:2022991 Mch8g2363 Mch-Chr8:26762816 4.82E-279 dispersed
Mch6g0305 Mch-Chr6:2022687 Mch6g0306 Mch-Chr6:2022991 1.35E-232 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0306 - - - 0.0