Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0346 ATGGATGCTCGCCGCGGCTCCCGCATCGTAAACCCCAAAGTTCGACAGGTAGGATTCTTCACCATCGACGCTCCAAATCCCCCCAGCCGGAGCCTCTCCGTCCCGGCTGACTGCACCACTTCCCCCCAATCCCACTCTCCCCTCACCAATTCCTTATCTCCGGTCATGATTCCCCCTCCCCGTCATCTTTCCGATAACCTTGCCTCTCGCTCCACTGTTCTCCCCGTTCCGGCTCCCGCCAATTGGAGAAATTCGGCCGACCAGATCCCTGTTGGGAGCTACAATCCTTCCGAGACGCTGCTTGGCACCTCTCCCGTGGCCTCGCCTTCGAGTAGAATTGAGGACGAAGAGTTGGACTTATCGGAGGATTCCGCCACATCCGTTTGGTATCGCCGGAGCGGTTCGGGGAAGATTGCGTCGAGCTTTCCGGGCGTTGGAATCCACGTGGCGGCTAAGTCGTCGGAGAATTCTCAGGCGGTGCCTCTCGCTAATGCTAGGACTTCGGAACCTGACAAGCCTACTGGTGTCGCAGAAAAGAATGGAGGGGCATCCACAGAGGTCCCGAATCAACAATTACCACCAAGTTCAAAACCCCTGAAGGCGAAAACAACAAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCTGCAAAAGTTTCTGCTAAAGGTGAGGCGAACAAGTCAAGTACTGCTCCCGGTAAAGCTGTGAAGCAGCCTTCGGCTATAAAAGATAGCCCTGCCGCACCTTCGGTTGCATCAACTGACAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCTCCCCATCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGGAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCGAAGTTTTTCCAACTTGACACCATTCATCCTGCCATTTACAAGGTTGGCTTACAATATATGGCTGGAGATATATGTGGAGGCAATGCTCGTTGTATTGCAATGCTTCATGCGTTTCAACAGGCAATTAAAGACTACTCAACTCCGCCACAGAAGTCTCTGGGTAGAGATTTAACTGCAAAAATTGGTAGCTATGTGTCATTCTTCAACGAATGCAGGCCACTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCGCATTGCCAAGTTACCATTGAATCTTCCGGAATCCGAAGTAAAAGCTACGCTTTGCTCAGATATCAATCGCTTTATCAATGAGAAGATAATACTTGCAGATGAGGTCATAGTTAGACATGCTGCTACCAAGATCAGAGATGGAGATGTTCTTCTCACATATGGATCATCATCTGCTGTAGAGATGCTTCTATTATACGCTCATGAGCTCGGAAAACAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAAATGGAAGGGCAAGCACTTCTTCGTAGGCTAATAACAAGGGGCCTAAGTTGTACCTACACTCATATAAATGCTATTTCTTATGTGATGCATGAAGTAACACGAGTTTTTCTGGGGGCTGCCGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTTCCGGTCTTAATTTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCGATATGTTTTAACGAATTAGGTGACCCAGATGCTATCTCCAAGGTTCCAGGAAGGGAGGAAATTAATTACCTAGATAATTTGACTGCTAAAGAACAATTGCAACTTCTAAATTTAATGTATGACGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGGTA 1911 47.1 MDARRGSRIVNPKVRQVGFFTIDAPNPPSRSLSVPADCTTSPQSHSPLTNSLSPVMIPPPRHLSDNLASRSTVLPVPAPANWRNSADQIPVGSYNPSETLLGTSPVASPSSRIEDEELDLSEDSATSVWYRRSGSGKIASSFPGVGIHVAAKSSENSQAVPLANARTSEPDKPTGVAEKNGGASTEVPNQQLPPSSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSSTAPGKAVKQPSAIKDSPAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGSYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDINRFINEKIILADEVIVRHAATKIRDGDVLLTYGSSSAVEMLLLYAHELGKQFRVVVVDSRPKMEGQALLRRLITRGLSCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGREEINYLDNLTAKEQLQLLNLMYDATPSDYISMIVTDYGMV 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2312099 2316870 - MC06g0283 Mch6g0346 689793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0346 637 MobiDBLite consensus disorder prediction 21 52 - -
Mch6g0346 637 SUPERFAMILY NagB/RpiA/CoA transferase-like 302 636 IPR037171 -
Mch6g0346 637 MobiDBLite consensus disorder prediction 154 287 - -
Mch6g0346 637 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 46 637 - -
Mch6g0346 637 MobiDBLite consensus disorder prediction 94 110 - -
Mch6g0346 637 MobiDBLite consensus disorder prediction 258 287 - -
Mch6g0346 637 MobiDBLite consensus disorder prediction 26 52 - -
Mch6g0346 637 MobiDBLite consensus disorder prediction 94 120 - -
Mch6g0346 637 Gene3D - 443 637 IPR042529 -
Mch6g0346 637 Pfam Initiation factor 2 subunit family 349 636 IPR000649 GO:0044237(InterPro)
Mch6g0346 637 MobiDBLite consensus disorder prediction 183 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0346 Mch-Chr6:2312099 Mch6g0348 Mch-Chr6:2321607 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0346 K03680 - csv:101215104 1098.19