Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0348 ATGGATGCTCGCCGCGGGTCCCGCGTCGTCATCGATCCCAAAGTCCGGCAGGTCGGGTTCTTCACCCCCGATGCACCGCCTTCACCGGGTCGGACCACCACCGCCCCGCCCGACTGCACCACTTCACAGTTATCCGACTCTCCGACCAGCAATTCTTTATCTCCGGTGATGATTCCGCCCCCGCGTCATCCTTCCGATAACCTTGCCTCCCGGACGGCTGTTCTGCCGGTTCCGGCTTCCGGAAATTGGAGGCATCCTGAGGATCAGGTTCCTGTTGGGAGCCACAATCCCTCAGAAACGTTGCTCGGATCGTCGCCGTTGGCATCGCCTTCGAGTCGACTTGGAGGTGAAGAGTTGGAGTTCTCGGAGGATTCGGCGGCCTCCGTCTTGCTTCGGCGGAGTAGTTCCGGGAAGTTAGCCTCAAGCTGTCCGGGCGTCGGATTCCACATGGCGGCTAAGTCTTCTGCGAATTTACAGACGATGCCTGCTAATAGTATGAGGACATCGGGAACTAATAAGCCTGCTGGAGCCACAGAAAAGATTGGAGGAGCATCTGCAGAGGTTAAAGATCATCATGCATCAAGTTCGAAACCCTTGAAGACTAAAACCACGAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAGCGAGCTGCAAAGGTTTCTGCTAAAGGTGAAGCAAATAAGTCAGGTACTGCCTCTGGGACAACAGCTCCTAGTAAAGTTGGGAAACAGCCTTCAACAATAAAAGGTGGTCCTGCCACAGCTTCAGTTGCATCTGCTGATAATAGAGGAGGTGATCGTATGGTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGTATGCAATTTGATGATAAAAATCGAGTAGAAAAGGCTAAAAAGCGAGCTGTGTTCAATCAAACTGAAGCAAGAAATAGGGTTGAACTATTTCGCCATTTGCCACAATATGAACAGGGGACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTTCAACTTGATACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCTGGAGATATATCTGGCGGTAATGCTCGTTGTATTGCAATGCTCCATGCATTTCAGCAAGCCATTAAAGACTACTCAACCCCACCACAGAAATCTCTTGTGAGAGATTTAACTGCAAAAATTGGCGTCTATGTGTCATTCTTTAATGAATGCAGGCCACTTTCCGTTAGTATGGGAAATGCAATCAGATTTTTGAAAAATCGCATTGCCAAATTACCACCAAATCTTCTAGAATCTGAGGCAAAAGCTGCACTTTGCTTAGATATCAGTCGTTTTATCAATGAGAAGATAATGCTAGCTGACGAGGTCATAGTGAGGCATGCTGCTACCAAGATCAGAGATGGAGACGTTCTTCTCACATATGGGTCATCGTGTGCTGTAGAGATGCTTCTATCATATGCCCATGAGCTTGGAAAACAATTTCGCGTCGTTGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTTCGTAGGCTGATAGCAAAGGGCCTAAGTTGTACTTACACTCATATAAATGCTATTTCCTATGTGATGCGTGAAGTAACCCGAGTTTTTTTGGGAGCTGCGGCAGTGTTAGCTAATGGAACTGTATATTCTAGAGTGGGGACTGCAGGTATTGCCATGGTTGCACATGCATTCCATGTTCCAGTATTATTCTGCTGTGAAGCATATAAATTTCATGAAAGGGTACAACTTGATTCGATATGCTTTAATGAATTAGGTGACCCAGATGCTATCTCAAAGGTTTCGGGAAGGACAGACGTTAATTATCTAGATGGTTTGACTGCTAAAGAACATCTGCAACTTCTAAACTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTGACAGATTATGGCATGATACCACCTACAAGCGTGCCCGTAATTGTACGCGAGTATAGAAGAGAGCACCTATGGGTTTAG 1986 46.53 MDARRGSRVVIDPKVRQVGFFTPDAPPSPGRTTTAPPDCTTSQLSDSPTSNSLSPVMIPPPRHPSDNLASRTAVLPVPASGNWRHPEDQVPVGSHNPSETLLGSSPLASPSSRLGGEELEFSEDSAASVLLRRSSSGKLASSCPGVGFHMAAKSSANLQTMPANSMRTSGTNKPAGATEKIGGASAEVKDHHASSSKPLKTKTTKAERRALQEAQRAAKVSAKGEANKSGTASGTTAPSKVGKQPSTIKGGPATASVASADNRGGDRMVDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDISGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPNLLESEAKAALCLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLSYAHELGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVTRVFLGAAAVLANGTVYSRVGTAGIAMVAHAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKVSGRTDVNYLDGLTAKEHLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2321607 2328700 - MC06g0285 Mch6g0348 689795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0348 661 MobiDBLite consensus disorder prediction 264 285 - -
Mch6g0348 661 MobiDBLite consensus disorder prediction 184 214 - -
Mch6g0348 661 SUPERFAMILY NagB/RpiA/CoA transferase-like 307 654 IPR037171 -
Mch6g0348 661 MobiDBLite consensus disorder prediction 158 285 - -
Mch6g0348 661 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 46 658 - -
Mch6g0348 661 MobiDBLite consensus disorder prediction 1 125 - -
Mch6g0348 661 MobiDBLite consensus disorder prediction 158 175 - -
Mch6g0348 661 MobiDBLite consensus disorder prediction 93 111 - -
Mch6g0348 661 Gene3D - 448 654 IPR042529 -
Mch6g0348 661 MobiDBLite consensus disorder prediction 34 53 - -
Mch6g0348 661 MobiDBLite consensus disorder prediction 226 253 - -
Mch6g0348 661 Pfam Initiation factor 2 subunit family 352 644 IPR000649 GO:0044237(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0346 Mch-Chr6:2312099 Mch6g0348 Mch-Chr6:2321607 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0348 K03680 - csv:101215104 997.653