Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0374 | ATGCGCATGAGCTGTAATGGATGCCGAGTTCTCCGCAAAGGCTGCTCTCAGAGCTGCTCCATTAGACCCTGCCTTCACTGGATCAAAACCCCACAATCCCAAGCCAACGCCACCTTCTTCCTCGCAAAATTCTACGGCCGCGCCGGCCTCGTCAACCTCATCAATGCCGGCCCCGACCATCTCCGACCAGCTATTTTTAAATCTTTGCTGTTCGAGGCGTGTGGCCGGATTGTGAACCCGATTTTCGGGTCGGCCGGATTGCTGTGGTCCGGGAGCTGGCAGCTCTGCCAGGATGCCGTGGAGGCTGTTCTGAAAGGCGCGCCGATTCTCCCGGTTTCTTCCGAAACGGCGGCGTCGCACATGGGACCACCGTTGAAGGGCTGGGACATCCGCCACGTGTCAAAAAACCAGGGCTCTGCTGCTTCCGCCCTCCGGAAAATCAAGACGCGGCGGCGTTTCAAGCGCGCGGCGGCGGCGGCCACCAAGACGAAGCCGAAGGAGGAGCCGTCGGTGATCGAGTTCGGATTCGACGACCCAACCCGGATGGTAGCGGAGCCCCGAGGTTTGAAGTTGGAGGTTGAAAATTGGGGGGGGCGTGAGTCGGAGCTGAGTCAGCGGTCGGATAAGGACTGCGGCAGCGACGACGCTGCCGAGTGCTTGTCGGTGGAGACTGTGGACGCTTCTTCGGTGGGCCAGGGTGATGTCGTGGAGTTGGAACTTACGTTGGGGCTTGGGTACAGTCGGATGCTGACGTGA | 756 | 60.45 | MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGWDIRHVSKNQGSAASALRKIKTRRRFKRAAAAATKTKPKEEPSVIEFGFDDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDVVELELTLGLGYSRMLT | 251 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2484246 | 2485623 | - | MC06g0310 | Mch6g0374 | 689821 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0374 | 251 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 244 | - | GO:0010468(PANTHER) | |
Mch6g0374 | 251 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 102 | IPR004883 | - | |
Mch6g0374 | 251 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g1294 | Mch-Chr8:9423086 | Mch6g0374 | Mch-Chr6:2484246 | 5.25E-88 | transposed | |
Mch6g0374 | Mch-Chr6:2484246 | Mch9g1958 | Mch-Chr9:20983539 | 9.53E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43516 | PF03195 | LOB | 6.40E-22 | No_clan | Mch | TF |
Pathway information
