Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0403 ATGACCGATATCGCAAAATCAACCTCGAAAGAGGAGATTGAGAAACTTGAAACCAAGCCCAAGCGCGAGGCAGATGTTGAAGATCCCGATGTTACTACGAAGAAGTTTAAAACGGAAGCTGCTGCTGATTCTGGAGACTGTACCGGCAGAAAGTTGGAAGCTGGTAACGGTGATGAAGAAGATAAGATCGTCAAGAGGGAAGTCGAGCTTGAAATTGAAGCGGATGCGGCGGAGGATAAAGGGTCCAGGCATACAATGGAGGATGCCTGGGTTTTGCTTTTGGATGCGAGCTTGGATTCTCCTGGGAAGTTGAGATGTTCACATTTTGCTATCTACGACGGACATGGGGGCCGATTAGCTGCCGATTACGCTCAAAAGCATTTGCATACAAATGTTCTCTCGGCTGGGTTACCACGTGAGTTGTTGGATGTAAAAGCAACTAAAAAGGCTATACTTGATGGTTTCCGGAAAACTGATGAGTCTCTTCTTCAAGAAAGCTCTGCAGGGGGATGGCAGGATGGCGCTACTGCTGTTTGCCTTTGGATATTAGGTCAAACGGTTTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCACGATCTTTGACTGCTGACAAATCGTCAAATAATCCTAATGGTGGAAGCTCTTTAAGGGCTATCGTTTTGACAAGGGAACATAAGGCAATCTTCCCACAGGAGAGAGCTCGAATTCAAAAGGCTGGTGGTGTTGTTGGTTCAAACGGTCGACTGCAGGGCCGGCTTGAAGTTTCTCGAGCACTTGGAGATCGCCAATTTAAAAAGTTGGGCGTTATTGCAATCCCAGACATTCATTCTTTCGAATTGACTGATAGGGAGCATTTTATCATTCTCGGATGTGATGGACTTTGGGGGGTTTTTGGACCAAGTGATGCTGTCGATTTTGTGCAGAAATTATTGAAGGATGGCTTGCCCATAACATCAATAAGTCGACGTCTTGTGAGGGAAGCTATTCGTGAGCGGCGCTGCAAAGATAACTGTACTGCAATCATCATTGTCTTCAAGCCCAAATTATTAAGCAGGAAATAA 1068 45.32 MTDIAKSTSKEEIEKLETKPKREADVEDPDVTTKKFKTEAAADSGDCTGRKLEAGNGDEEDKIVKREVELEIEADAAEDKGSRHTMEDAWVLLLDASLDSPGKLRCSHFAIYDGHGGRLAADYAQKHLHTNVLSAGLPRELLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCLWILGQTVFVANVGDAKAVVARSLTADKSSNNPNGGSSLRAIVLTREHKAIFPQERARIQKAGGVVGSNGRLQGRLEVSRALGDRQFKKLGVIAIPDIHSFELTDREHFIILGCDGLWGVFGPSDAVDFVQKLLKDGLPITSISRRLVREAIRERRCKDNCTAIIIVFKPKLLSRK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2658264 2665387 + MC06g0334 Mch6g0403 689850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0403 355 CDD PP2Cc 77 347 IPR001932 -
Mch6g0403 355 MobiDBLite consensus disorder prediction 1 58 - -
Mch6g0403 355 FunFam Probable protein phosphatase 2C 67 60 349 - -
Mch6g0403 355 ProSiteProfiles PPM-type phosphatase domain profile. 73 347 IPR001932 -
Mch6g0403 355 SMART PP2C_4 67 345 IPR001932 -
Mch6g0403 355 Gene3D - 56 349 IPR036457 -
Mch6g0403 355 Pfam Protein phosphatase 2C 78 335 IPR001932 -
Mch6g0403 355 SUPERFAMILY PP2C-like 71 348 IPR036457 -
Mch6g0403 355 PANTHER PROTEIN PHOSPHATASE 2C 61 347 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0403 Mch-Chr6:2658264 Mch8g0055 Mch-Chr8:319282 1.55E-24 dispersed
Mch6g0403 Mch-Chr6:2658264 Mch8g3003 Mch-Chr8:32638254 6.12E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0403 K17500 - csv:101216467 588.956