Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0404 ATGGGAAAGGGAAAACTTGTCTCTGAGAAAATTAAGCTCCTTCTTGCCTTGGTTGCTCTGCAATTCTGCTATGCAGGATTTCACATTGTGTCTAGAGTTGCCTTAAACATTGGCGTTAGTAAAGTCGTCTACCCGGTTTATCGAAACGCGATTGCTTTAGCTCTGTTGAGTCCTTTTGCTTATTTTCTGGAGAAGAATGAAAGGCCTCCTCTTACTTTTTCTTTGTTGCTTCAGTTCTTCCTTCTAGCTTTATTGGGGATCACTGCCAATCAAGGATTTTATCTCTTGGGGCTGAATTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCTATTACTTTTATCATGGCTTCTGTTCTGAGGCTCGAGAAAGTGAACTTCAGAAGGAGAGATGGTCTGGCAAAGCTTCTGGGAACCATTGGAAGTGTTGGAGGTGCAACTGTGATCACTCTCTATAGAGGACCTCCTCTTCTCCACAACAACTACCAAACTCAAGGAAGTAGTATTTTGGAGATGGATGACCCTACAGCAAAAATGCAGAATTGGAGATGGGGTTGTATATACCTGCTAGGCCACTGCCTTTCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTGTTGAAAAAATATCCAGCAAAACTAACACTAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATAGCTGGCTTTGTGGAAACAGACTACCAGTACTGGAAAATCCAATCTGCAGAAGAACTCTTCACCATTTTATATGCTGGTGTTGTAGCCTCTGGAATTGTGATCTCTCTCCAAACATGGTGCATCCACAAAAGTGATCCTGTCTTTGTTGCTGTCTTCCAGCCTCTGCAAACATTCCTAGTTGTCATCATGGCATTTCTCATCCTCGGCGACCAGTTGTTCTCCGGCGGGCTTATTGGTGCTGTTCTTATAACACTTGGGCTGTACTCAGTTTTGTGGGGGAAAAGTGAAGAAAAGGCATTGGAAGAACAGGACAAATCTTTGAAACAGCCCCTTTTGGAAGCCCAAAAT 1053 43.21 MGKGKLVSEKIKLLLALVALQFCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLLQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFIMASVLRLEKVNFRRRDGLAKLLGTIGSVGGATVITLYRGPPLLHNNYQTQGSSILEMDDPTAKMQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTLTSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGVVASGIVISLQTWCIHKSDPVFVAVFQPLQTFLVVIMAFLILGDQLFSGGLIGAVLITLGLYSVLWGKSEEKALEEQDKSLKQPLLEAQN 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2667078 2668943 + MC06g0335 Mch6g0404 689851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0404 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Mch6g0404 351 PANTHER WAT1-RELATED PROTEIN 16 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch6g0404 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 330 - -
Mch6g0404 351 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020(InterPro)
Mch6g0404 351 Pfam EamA-like transporter family 14 133 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0152 Mch-Chr11:971425 Mch6g0404 Mch-Chr6:2667078 4.35E-128 dispersed
Mch11g0858 Mch-Chr11:5841995 Mch6g0404 Mch-Chr6:2667078 1.22E-70 dispersed
Mch6g0404 Mch-Chr6:2667078 Mch8g2753 Mch-Chr8:30685804 1.10E-73 dispersed
Mch6g0404 Mch-Chr6:2667078 Mch8g0813 Mch-Chr8:5723787 3.62E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0404 - - - 0.0