Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0447 ATTATTTTAAGAAAAGTGAAAGTGTTATTTATTACTCTCTGGTCGGCCCTCGCCTCCGAGCCTCGGCCTTTAAAAGCCACGCGGCTTCAAATTTCGGGGCAGGAAACGGAAAAAATAAAAAAAAAATACAGAAAAATGGAGAATCTGTTTCTGTCTCTGTTAATTCTATTGGTGTCGTTTCCTTGTGTAGCTGTGTTGATTCTATTCTACCGGCACCGGGCACAGTTCGCGTACCCGAACACGCCGCCGGGCAGCATCGGGTACCCGATAATCGGGGAGACTCTGGAAATGGTGGCCCACGAGCAGAAGGGGCAGCCGGAGAATTTCATATTCGGGCGCGTCGCGAGGCACAAGACGGAGGTGTTCACGACGTCGGTGCTGGGGGAGCCGACGGCGGCGTTCTGCACGGCGGCCGGGAACAAGCTGCTGTTCTCGAACGAGCAGAAGCTGGTGACGCCGTGGTGGCCGGAATCCGCCAACAAAGTTTTCCCATCCACCATTAAGATCAACACCAACGACGAAGCCAAGAGAACCAAGAGCCTGCTCCCGCAGTTCATCAAACCCGAAGCGCTTCAGCGCTATGTTGGAGTCATGGACACCATTGCCCACAATCACTTCGCTTCCAGTTGGGAAAATAAAAACGAAATCGTCGTTGCTTCCACCGTTAAAGACTACACATTCGGGCTGGCGTGCCGTTTGTTCGTGAGCATGGACGATGCGAACGAGGTGCAGAGACTTTTCGAGCGGTTCCAGGAGATTGCGGCGGGGATAATATCGGTCCCCATAGACTTCCCGGGGACCATGTTCCGCAAAGCCATCAAGGCCTCCGAGTTCGTGCGCAAGGAGCTGCTCGCCATAATCAAGCAGCGCAAGATCGACCTGGCCGAGGGCCACGCCTCCCCCACCCAAGACATCCTCTCCCACATGCTCCTCACCTGCGACTCCAACGGCCACTTCATCCACGAGGACGACATCGCCTCCAAGATCCTCGGCCTCCTCGTCGGCGGCCACGACACCGGCGTCTCCACCTGCACCTTCATCGTCAAGCACTTGGCCTCTCTCCCCCACGTCTACCAAAATGTCTACAATGAGCAAATGGAGATAGCGAAATCCAAGGGTCCAGGAGAGCTGTTGAATTGGGAAGATCTCCAAAAGATGAAGTATTCGTGGAACGTGGCGTGTGAAGTCCTCCGCCTATATCCGCCGGTTGGAGGAGCTTTCAGAGTTGCCCTCACCGACTTTATGTTTAATGGCTTCTATATCCCCAAGGGCTGGAAGTTGCACTGGAGTGCGGCGGCGACCCACAAGAACGCAGAATACTTCCCGGATCCGTACAAGTTCGATCCGACGAGATTCGAGGGGAAAGGGCCGGCGCCGTTCACGTACGTCCCGTTCGGCGGAGGGCCGAGGATGTGCCCCGGCAAAGAGTACGCCCGCCTCGAGGTTCTGGTTTTCATGCACCATTTGGTCAAGCGCTTCAAGATCGAACTTTGCCTTCCCGACGAGAAAGTCACCGCCAGTCCAATCCCCACCTCCGCCCACGGCCTTCCCGTCCGCCTCTTCCCCCACGCGCCG 1575 56.0 IILRKVKVLFITLWSALASEPRPLKATRLQISGQETEKIKKKYRKMENLFLSLLILLVSFPCVAVLILFYRHRAQFAYPNTPPGSIGYPIIGETLEMVAHEQKGQPENFIFGRVARHKTEVFTTSVLGEPTAAFCTAAGNKLLFSNEQKLVTPWWPESANKVFPSTIKINTNDEAKRTKSLLPQFIKPEALQRYVGVMDTIAHNHFASSWENKNEIVVASTVKDYTFGLACRLFVSMDDANEVQRLFERFQEIAAGIISVPIDFPGTMFRKAIKASEFVRKELLAIIKQRKIDLAEGHASPTQDILSHMLLTCDSNGHFIHEDDIASKILGLLVGGHDTGVSTCTFIVKHLASLPHVYQNVYNEQMEIAKSKGPGELLNWEDLQKMKYSWNVACEVLRLYPPVGGAFRVALTDFMFNGFYIPKGWKLHWSAAATHKNAEYFPDPYKFDPTRFEGKGPAPFTYVPFGGGPRMCPGKEYARLEVLVFMHHLVKRFKIELCLPDEKVTASPIPTSAHGLPVRLFPHAP 525
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 2989965 2992689 - MC06g0372 Mch6g0447 689894
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0447 525 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 SUPERFAMILY Cytochrome P450 75 522 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch6g0447 525 Gene3D Cytochrome P450 72 521 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 Pfam Cytochrome P450 82 502 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 CDD CYP90-like 113 522 - -
Mch6g0447 525 PANTHER CYTOCHROME P450 26 80 498 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Mch6g0447 525 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0447 525 FunFam Taxadiene 5-alpha hydroxylase 72 523 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0447 Mch-Chr6:2989965 Mch6g1342 Mch-Chr6:11138427 1.28E-249 dispersed
Mch6g0446 Mch-Chr6:2977366 Mch6g0447 Mch-Chr6:2989965 1.24E-251 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0447 K20667 - gmx:100801007 677.552