Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g0447 | ATTATTTTAAGAAAAGTGAAAGTGTTATTTATTACTCTCTGGTCGGCCCTCGCCTCCGAGCCTCGGCCTTTAAAAGCCACGCGGCTTCAAATTTCGGGGCAGGAAACGGAAAAAATAAAAAAAAAATACAGAAAAATGGAGAATCTGTTTCTGTCTCTGTTAATTCTATTGGTGTCGTTTCCTTGTGTAGCTGTGTTGATTCTATTCTACCGGCACCGGGCACAGTTCGCGTACCCGAACACGCCGCCGGGCAGCATCGGGTACCCGATAATCGGGGAGACTCTGGAAATGGTGGCCCACGAGCAGAAGGGGCAGCCGGAGAATTTCATATTCGGGCGCGTCGCGAGGCACAAGACGGAGGTGTTCACGACGTCGGTGCTGGGGGAGCCGACGGCGGCGTTCTGCACGGCGGCCGGGAACAAGCTGCTGTTCTCGAACGAGCAGAAGCTGGTGACGCCGTGGTGGCCGGAATCCGCCAACAAAGTTTTCCCATCCACCATTAAGATCAACACCAACGACGAAGCCAAGAGAACCAAGAGCCTGCTCCCGCAGTTCATCAAACCCGAAGCGCTTCAGCGCTATGTTGGAGTCATGGACACCATTGCCCACAATCACTTCGCTTCCAGTTGGGAAAATAAAAACGAAATCGTCGTTGCTTCCACCGTTAAAGACTACACATTCGGGCTGGCGTGCCGTTTGTTCGTGAGCATGGACGATGCGAACGAGGTGCAGAGACTTTTCGAGCGGTTCCAGGAGATTGCGGCGGGGATAATATCGGTCCCCATAGACTTCCCGGGGACCATGTTCCGCAAAGCCATCAAGGCCTCCGAGTTCGTGCGCAAGGAGCTGCTCGCCATAATCAAGCAGCGCAAGATCGACCTGGCCGAGGGCCACGCCTCCCCCACCCAAGACATCCTCTCCCACATGCTCCTCACCTGCGACTCCAACGGCCACTTCATCCACGAGGACGACATCGCCTCCAAGATCCTCGGCCTCCTCGTCGGCGGCCACGACACCGGCGTCTCCACCTGCACCTTCATCGTCAAGCACTTGGCCTCTCTCCCCCACGTCTACCAAAATGTCTACAATGAGCAAATGGAGATAGCGAAATCCAAGGGTCCAGGAGAGCTGTTGAATTGGGAAGATCTCCAAAAGATGAAGTATTCGTGGAACGTGGCGTGTGAAGTCCTCCGCCTATATCCGCCGGTTGGAGGAGCTTTCAGAGTTGCCCTCACCGACTTTATGTTTAATGGCTTCTATATCCCCAAGGGCTGGAAGTTGCACTGGAGTGCGGCGGCGACCCACAAGAACGCAGAATACTTCCCGGATCCGTACAAGTTCGATCCGACGAGATTCGAGGGGAAAGGGCCGGCGCCGTTCACGTACGTCCCGTTCGGCGGAGGGCCGAGGATGTGCCCCGGCAAAGAGTACGCCCGCCTCGAGGTTCTGGTTTTCATGCACCATTTGGTCAAGCGCTTCAAGATCGAACTTTGCCTTCCCGACGAGAAAGTCACCGCCAGTCCAATCCCCACCTCCGCCCACGGCCTTCCCGTCCGCCTCTTCCCCCACGCGCCG | 1575 | 56.0 | IILRKVKVLFITLWSALASEPRPLKATRLQISGQETEKIKKKYRKMENLFLSLLILLVSFPCVAVLILFYRHRAQFAYPNTPPGSIGYPIIGETLEMVAHEQKGQPENFIFGRVARHKTEVFTTSVLGEPTAAFCTAAGNKLLFSNEQKLVTPWWPESANKVFPSTIKINTNDEAKRTKSLLPQFIKPEALQRYVGVMDTIAHNHFASSWENKNEIVVASTVKDYTFGLACRLFVSMDDANEVQRLFERFQEIAAGIISVPIDFPGTMFRKAIKASEFVRKELLAIIKQRKIDLAEGHASPTQDILSHMLLTCDSNGHFIHEDDIASKILGLLVGGHDTGVSTCTFIVKHLASLPHVYQNVYNEQMEIAKSKGPGELLNWEDLQKMKYSWNVACEVLRLYPPVGGAFRVALTDFMFNGFYIPKGWKLHWSAAATHKNAEYFPDPYKFDPTRFEGKGPAPFTYVPFGGGPRMCPGKEYARLEVLVFMHHLVKRFKIELCLPDEKVTASPIPTSAHGLPVRLFPHAP | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 2989965 | 2992689 | - | MC06g0372 | Mch6g0447 | 689894 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g0447 | 525 | PRINTS | E-class P450 group I signature | 472 | 495 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | PRINTS | E-class P450 group I signature | 324 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | PRINTS | E-class P450 group I signature | 430 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | PRINTS | E-class P450 group I signature | 462 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | SUPERFAMILY | Cytochrome P450 | 75 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 465 | 474 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch6g0447 | 525 | Gene3D | Cytochrome P450 | 72 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | Pfam | Cytochrome P450 | 82 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | CDD | CYP90-like | 113 | 522 | - | - | |
| Mch6g0447 | 525 | PANTHER | CYTOCHROME P450 26 | 80 | 498 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Mch6g0447 | 525 | PRINTS | P450 superfamily signature | 335 | 352 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | PRINTS | P450 superfamily signature | 463 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | PRINTS | P450 superfamily signature | 472 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0447 | 525 | FunFam | Taxadiene 5-alpha hydroxylase | 72 | 523 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g0447 | Mch-Chr6:2989965 | Mch6g1342 | Mch-Chr6:11138427 | 1.28E-249 | dispersed | |
| Mch6g0446 | Mch-Chr6:2977366 | Mch6g0447 | Mch-Chr6:2989965 | 1.24E-251 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch6g0447 | K20667 | - | gmx:100801007 | 677.552 |