Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0451 TTGAGGACCATCAGCCTTATGGGCAATGATTTTGAGGGCCCTCTCCCGGATGTCAAGAGACTTGGGGCTTTGAAGTCTCTGTATCTCTCACGAAACCGTTTCTCCGGGGAGATTCCCGGGGATAAATTCTCCAGTATGCTGTCTTTGAAGAAGGTGCATTTGGCTCAGAACCAGCTTGAGGGTCAGATTCCATGGTCCCTCGTGGAACTCCCTCGCCTCATGGAGTTGAGGCTTGAAGGAAACAAGTTTTCAGGACAAATTCCTAATTTTCACCAGAAGGGATTGAAGTCCTTTAATATCTCCAACAACAATCAACTTCATGGCCCGATCCCATCAGCCCTCGCCCAGATCGATCCAACCTCCTTTTCAGGTCTGTTTTCTTTTCTTTTCTTTTGGGTTCTTGTTCTGTTTTTTAATTTTGTAATGTGTGCCAATGACATGGATCCAGCAGTCGGGTCAAGATCACCGGACCGCGGTTCCAGCCACGGAAGCTTGGGTAAACGGGCCGGCGACAACGCTAAATTGTCATTTGTAAGAGAGGATTCAGAGAGGTTTGATATGTCAGACTTGCTTAAAGCCTCTGCAGAAATCCTAGGAAGTGGGTGCTTCGGTTCTTCTTATAAAGCAGCCTTGACCAACGGGCCTGTCATGGTTGTGAAGAGGTTTAAGCAAATGAACAATGTGGATAAAGAGGAATTCCAAGAACATATGAGAAGAATTGGAAGGTTAAAACACCCAAATTTGCTTCCTATCGTTGCTTACTACTACAAAAAGGAAGAAAAACTTCTCATTACAGACTATATTGAGAAGGGTAGCTTGGCTGTTCATCTTCATGGGCACCAAGCAGTGGGTCAACCAGCCCTCGATTGGCCTGCACGATTGAAGATCGTGAAAGGGGTTGCAAAGGGTCTTCGGTATCTGTACACAGAGCTTCCAAGTCTGATTTCTGCTCACGGGCATCTCAAATCCTCAAATGTGCTTCTCAAGGCTTCGAACGAGCCGGTTCTTTCGGACTACGGCCTCATCCCTGTGGTGAACCAAGAACACGCCCAAGAACTAATGGTGGCCTACAAATCCCCAGAATACTCTCAGCAGGGCCGAATCACAAAGAAGACAGACGTGTGGAGCTTCGGGCTGTTGATCTTAGAGATTCTCACAGGGAAATTCCCGGCCAACTTTTTGCACCAAGGCAAGGGAGGGGATGAGGAAGATCTGGCCACTTGGGTAAAAGCCATTCCCGAAAAAGATTGGAGCACCCAAGTCTTCGATAAGGACATGGGGCCGACGAAGAACTGCGAGGCGGAGATGCTGAAGCTTCTGCGGATCGCCATGACATGTTGCGAGAGCGATTTCGAGAAGAGGCTGGATTTGCGAGAGGCTGTGGACAAAATCGAGGAGTTGAAAGAAAAAGACGGGGATGAAGATTTCTACTCCTCGTACGCCAGCGAGGCTGACATTAGGTCTTCGAGAGGACTATCTGACGAACTCAATTTCACCCTGTGA 1503 48.04 LRTISLMGNDFEGPLPDVKRLGALKSLYLSRNRFSGEIPGDKFSSMLSLKKVHLAQNQLEGQIPWSLVELPRLMELRLEGNKFSGQIPNFHQKGLKSFNISNNNQLHGPIPSALAQIDPTSFSGLFSFLFFWVLVLFFNFVMCANDMDPAVGSRSPDRGSSHGSLGKRAGDNAKLSFVREDSERFDMSDLLKASAEILGSGCFGSSYKAALTNGPVMVVKRFKQMNNVDKEEFQEHMRRIGRLKHPNLLPIVAYYYKKEEKLLITDYIEKGSLAVHLHGHQAVGQPALDWPARLKIVKGVAKGLRYLYTELPSLISAHGHLKSSNVLLKASNEPVLSDYGLIPVVNQEHAQELMVAYKSPEYSQQGRITKKTDVWSFGLLILEILTGKFPANFLHQGKGGDEEDLATWVKAIPEKDWSTQVFDKDMGPTKNCEAEMLKLLRIAMTCCESDFEKRLDLREAVDKIEELKEKDGDEDFYSSYASEADIRSSRGLSDELNFTL 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3004373 3006569 - MC06g0374 Mch6g0451 689898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0451 500 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 87 - -
Mch6g0451 500 Gene3D Transferase(Phosphotransferase) domain 1 268 486 - -
Mch6g0451 500 Pfam Protein tyrosine and serine/threonine kinase 196 463 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0451 500 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 469 IPR046959 -
Mch6g0451 500 Gene3D Phosphorylase Kinase; domain 1 160 267 - -
Mch6g0451 500 FunFam Pollen receptor-like kinase 1 268 478 - -
Mch6g0451 500 ProSiteProfiles Protein kinase domain profile. 192 477 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0451 500 Pfam Leucine rich repeat 24 83 IPR001611 GO:0005515(InterPro)
Mch6g0451 500 FunFam pollen receptor-like kinase 1 162 267 - -
Mch6g0451 500 SUPERFAMILY Protein kinase-like (PK-like) 196 465 IPR011009 -
Mch6g0451 500 Gene3D Ribonuclease Inhibitor 1 125 IPR032675 -
Mch6g0451 500 SUPERFAMILY L domain-like 1 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0451 Mch-Chr6:3004373 Mch8g2297 Mch-Chr8:26130326 2.31E-74 dispersed
Mch11g0639 Mch-Chr11:4132046 Mch6g0451 Mch-Chr6:3004373 1.96E-136 transposed
Mch8g1318 Mch-Chr8:9634757 Mch6g0451 Mch-Chr6:3004373 2.04E-122 transposed
Mch8g3250 Mch-Chr8:34456642 Mch6g0451 Mch-Chr6:3004373 1.18E-95 transposed
Mch3g1575 Mch-Chr3:17751555 Mch6g0451 Mch-Chr6:3004373 1.02E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77464 PF07714 PK_Tyr_Ser-Thr 4.90E-32 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0451 K28077 - csv:101213261 660.988