Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0462 ATGTCGATGTTGAACTTACTCGATCTCCTCCGATCTCAGCCGCTGCTGATGGCCGCCGCGAACCCCTTCTGGCCCGCCCTCTCCCATTTCTTAACCCTCTCTCTCTTGGGCTTCGGAGCTCTAAAGGTGACCAGAACCAGAACCTCCTCCCCACCAAACCACCTCAACTTCTTCTTCACCGCCGTCTCCGCCGCCACCGTCTCGAGCATGTCCACCGTCGAAATGGAAGTCTTCTCCAACGCCCAGCTCCTCATCGTCACCCTCCTCATGTTCCTCGGCGGCGAGGTCTTCGTCTCCGCCGCCGCCTTCCACCTCTCCCGCCGGTTCTCCAGCTCCGTTAAAAATCCGACCGGACCGGCACGGTCCATCGACTCGGAGTTGGAAATTGGCCATGGCCGGTCCATGACGGTTACTGACGAGTTCGTTAATCACGAAAAATCCACGGCGCTTCTGGGGCGCGTGGTGGTGGGATATCTTCTGGCGGCGAATCTGATTGGTTCTCTGTTCGTGTTCTTGTACGTGACTCTGGTTTCACGTGCGAGGCACGTGCTCGAGAGCAAGGGCATCAATTTGGTGACGTTTTCAATTTTCACCACGGTTTCCACTTTTACCAACTGCGGATTCATACCCACTAATGAAAATATGATCGTCTTTAAGGACAGTTCTGGAATTTTACTGGCTCTCGTCGCCCAGGTGCTCCTCGGCGGGTGTTTATACCCGGCAGGTCTCCGGTTAGTGATATCGGGGATGACGAAGGTGACGGGGAAGAAGGAGTTGAGATACATATTGAACAATTACTCGGAGATGGGTTATCCACATCTCTTGTCGGGGGTTCGGTGCCGGTATCTGGCCGGAACAGCGGCGGGGTTCGTAATTTTGCAGATGATAATCTTCTGCTCGCTGGAATGGAACTCGGAGGGATTGTGGGATGGCCTGAATCCGTACCGGAAGACGGTGGCGGCGCTTTTTCAGGTGACCAACTCTAGACACACCGGAGAATCGGTGGTGGATATCTCCGTCATCTCGCCGGCGATCTTGGTGCTCTTCGTTGTCATGATGTATCTCCCCCCATACACAACTTTTTTACCTATGAAGAATAAAGAGATGGATTCAGTGGGAAATGGGAAGGGCAAAAGGCAACACTTAGTGGGATTCTTGAAATTCTCACAGCTCTCTTATTTGGCCATCTTCATCATTCTCATATGTATCACAGAGAAACAACAGCTGAGAGATGATCCTCTCAACTTTACTGTGCTCAACATTACCCTAGAAGTCATCAGTGCATATGGTAATGTTGGCTTCTCAACTGGCTATAGTTGTAAAAGACAGCTTAAAGCTGATGGCTCTTGTAAAGATGCATGGTATGGATTTGTTGGAAGATGGAGTGGAAAGGGAAAATTTATTCTCATTCTCGTCATGATCTTTGGAAGATTGAAAAGTTTTAGTATGCATGGTGGTAGAGCTTGGAAATTATCATAG 1479 50.44 MSMLNLLDLLRSQPLLMAAANPFWPALSHFLTLSLLGFGALKVTRTRTSSPPNHLNFFFTAVSAATVSSMSTVEMEVFSNAQLLIVTLLMFLGGEVFVSAAAFHLSRRFSSSVKNPTGPARSIDSELEIGHGRSMTVTDEFVNHEKSTALLGRVVVGYLLAANLIGSLFVFLYVTLVSRARHVLESKGINLVTFSIFTTVSTFTNCGFIPTNENMIVFKDSSGILLALVAQVLLGGCLYPAGLRLVISGMTKVTGKKELRYILNNYSEMGYPHLLSGVRCRYLAGTAAGFVILQMIIFCSLEWNSEGLWDGLNPYRKTVAALFQVTNSRHTGESVVDISVISPAILVLFVVMMYLPPYTTFLPMKNKEMDSVGNGKGKRQHLVGFLKFSQLSYLAIFIILICITEKQQLRDDPLNFTVLNITLEVISAYGNVGFSTGYSCKRQLKADGSCKDAWYGFVGRWSGKGKFILILVMIFGRLKSFSMHGGRAWKLS 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3082374 3087050 - MC06g0385 Mch6g0462 689909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0462 492 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 16 489 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
Mch6g0462 492 Pfam Cation transport protein 45 358 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
Mch6g0462 492 Pfam Cation transport protein 391 482 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0462 Mch-Chr6:3082374 Mch6g0464 Mch-Chr6:3100443 7.49E-20 dispersed
Mch6g0462 Mch-Chr6:3082374 Mch6g0463 Mch-Chr6:3096288 3.70E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0462 K24976 - csv:101206239 642.114