Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0507 ATGGCGGCGGCGGCGGGGCTGCAGAGAAGCTACTTTGACGTGCTGGGGATTTGTTGCTCATCGGAAATTCCTGTGGTGGAGAATATTTTGAAGGCCATTGAAGGCGTTCGAGAGGTTACAGTTATTGTGGCTACTAGAACCGTCATTGTTGTTCATGACAACCTTGTTTCCCAGACTCAAATTGTTAAAGCCCTAAACCAAGCGAGATTGGAAGCGAACGTTAGAGCGTACGGAGATCAGAAAGATCACCGGAAAAAATGGCCGAGCCCGTACGCGGTGGCGAGTGGCCTACTGCTACTGCTGTCGTTTCTCAAATATGTGAACCCTATCTTCCAGTGGCTGGCTCTCGCCGCCGTCGCCGCCGGAATTTGGCCGATTGCTCTCAAAAGCTTCGCCGCCGTTCGCAATCTCAGACTCGACATCAACATTCTTGCTTTAATTGCAGTGATAGGGACGATTGTGATGAAGGATTATTTGGAAGCTGCCACCGTCGTTTTCCTCTTCACAATCGCCGAATGGCTCGAGTCCAGGGCCAGCCACAAGGCCAACGCCGTCATGTCGTCCCTTCTAAGCATTGCCCCTCAGAAAGCGGTCCTGGCCGACTCCGGCGAAGTTGTGGCCGCCGACGAGGTCAAATTGGGGACTCTGCTGGCGGTGAAACCCGGTGAAGACATTCCCATCGATGGAATTGTTGAGGAAGGGAACTGTGAAGTGGATGAGAAAACACTTACAGGTGAATCTTTCCCAGTTCCCAAACAAAAGAGTTCCACTGTTTGGGCTGGTACCATTAATCTAAATGGCTATGTTACTGTGAAGACTACTGCTCTTGCTGAGGATTGTGTGGTGGCTAAAATGGCTAAGCTGGTTGAAGAGGCACAGAACAACAAATCTAGAACGCAAAGGTTTATTGACAAATGCGCCAAATTCTATACTCCAGGTGTTATAATCATATCAACTTGCATAGCGGTGATTCCAGCTGCTCTAAGACTTCCCAATCGCAGCCATTGGTTTCACTTGGCCCTGGTTGTGTTAGTAAGCGCATGCCCCTGTGCACTCATCCTTTCCACGCCTGTTGCCTCATTCTGTGCACTTACAAAGGCAGCAACCTCTGGTCTTCTAATCAAAGGGGGTGACTACCTCGAAACTCTGGCCAAAATTAAGGTCATGGCATTTGACAAAACTGGAACAATTACAAGAGGTGAATTTGTGGTGACTGAATTTCAAGCTCTTGATGAGGACGATATAAGCTTAAACACATTGCTTTACTGGGTGTCAAGCATTGAGAGCAAGTCTAGTCATCCAATGGCAGCTGCCCTTGTTGACCATGGAAGATCACTATCCATTGACCCCAAACCTGAAAATGTGGATGACTTTCAAAACTTTCCTGGAGAAGGTGTTCATGGGAGAATTGATGGGAAAGATATCTATATCGGAAATCGAAAAATTGCTATAAGAGCCAACTGCCCAACAGTCCCAGAGATCAAAGATGATGCCAAGGATGGAAGGACTGTTGGATATATATTCTGTGGAACTACGGCAGCTGGAATGTTTAGTTTATCCGATTCGTGCCGAACAGGAGCTAAGGAGGCCATGGAAGAGCTCCGGTCTCTCGGTATAAAAACGGCTATGCTCACCGGAGACAGTTCTGCAGCAGCCTTGCAAGCACAGAAGGAATTGGGAAAGGCTTTAGAGACAGTTCATGCAGAGCTTCTACCTGAAGACAAAACAAGACTCATCAATGACTTCAAAAGGGAGGGACCGACAGCCATGATTGGAGATGGTTTAAATGACGCTCCTGCCTTGGCCACAGCTGATATCGGCATATCGATGGGAATCTCAGGTTCAGCCCTTGCAATAGAAACTGGAGATGTAATCCTAATGTCTAATGACATCAGGAAAATTCCAAAAGCCATTCGACTTGCAAGAAAAGCTAATATGAAAGTGATCGAAAATGTGATTCTTTCGGTCATTCCTAGAACTGCTATACTCGGCCTGGCGTTTGCTGGTCATCCACTTGTTTGGGCAGCAGTTCTTGCTGATGTTGGAGCATGTGTGTTGGTTATCCTCAACAGTATGCTCCTGCTGCGAGGAACCAGTGAACGCAAAGGGAAAAAAGCTGGCAAGTTTTCTGCTACTCACTGTTCCTCAAAACATGAATGCTGTCATGTTAGTAGTCATTCAGATCAACATGGTAATCACAGCCGGGATCTCGGGTGCAACCATGAAAATTCCCACTCTCATCATCATCATCATCATGTGCACGAGGACCACAACTCTCACAAAAAAACTCATGATGGTTGCTTACCTCAGAACTGTGCTTCCACGTGTGATTCCGGGAAGACAAATTCAAGTTCATGCAAGAAAAGTAAACTTGTGGACTCAAGTTCTAAGCTAGATGATTCTGCAGGCAGTGTAAGACCCTATGAACATGAACACTGCGTCCACAACCAATCGGCTCAACATGACCATCACACCCATTCGTCATGCACTGATCATCATATTGAGGACACACATTGCTCCCCAGAGAATACACAAGAGTTTTGCTCGTCTTGGGATTGTGCTTCAAATTGTCAGTCAAGTAAATGTGAGAAAACCGAGTGCACAAACTCACCCTCCAGCCTTGATGGATCTGCAGGCAGTATTGAGAACCATGAAAGTGGATGTTGTACTCATAATAGCCGGGCTGCTCAACACAATCATGAAATCCAAATTCCTAAATGTAATTCGGAGAACAGCCACATGTCCAATCTTGATCATCATATCGATGATGGTTGTTGCTCTCATAAGAACACTCAGAAGGTTTCTCTGCCTCATTCAAAGTGTCATTCTAAAACCTACATTTCGAATCCATGTGGAAAAACCAAATGTGCGGACTCAACTGCGCGGCAAGACGGGTCTTCAGGCAGTCTGGAACTCCTCCAAGACCAGAAGATCAAGAAGAATTGCACGAAAGATGAATGCAACAAAAGGGTTGCAATGATAGATGGTTGTGCTAAAGCGAAAGGACACCTTGAAATTAAACATCATTGCAACACTCATTTCTTCGAAAAGAATGGAACGTCAAATAGAGATGGTCATGAGGGGGCTCATCCTGATTCGGAGGCATGGAATGGAGATAGCAGTGGGTCAATCAACACTACCATAGTCGAGCTCGAAGCAGATCACTTGCACTCGAAACCTGCCAATACTTGTAAGCCTTTGGAAAAGAGAGAAACAGGTGACAGTTGTAAAAGCTGCAAAGTAGAATGCTCAGAACTAAAACTTAAGCAATGTTGTCCAAGTTTGGAGAAGAGAGGAATGGGTGGATGTTGTAAGAGCTACACGAAGGAGTGCTGTAGGAGGCGCTGTAGGAGGCACAGTGATATCGGGACGACACTCCGAGGAGGCCTAAAAGAAATTATTATAGAATAG 3411 46.14 MAAAAGLQRSYFDVLGICCSSEIPVVENILKAIEGVREVTVIVATRTVIVVHDNLVSQTQIVKALNQARLEANVRAYGDQKDHRKKWPSPYAVASGLLLLLSFLKYVNPIFQWLALAAVAAGIWPIALKSFAAVRNLRLDINILALIAVIGTIVMKDYLEAATVVFLFTIAEWLESRASHKANAVMSSLLSIAPQKAVLADSGEVVAADEVKLGTLLAVKPGEDIPIDGIVEEGNCEVDEKTLTGESFPVPKQKSSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNNKSRTQRFIDKCAKFYTPGVIIISTCIAVIPAALRLPNRSHWFHLALVVLVSACPCALILSTPVASFCALTKAATSGLLIKGGDYLETLAKIKVMAFDKTGTITRGEFVVTEFQALDEDDISLNTLLYWVSSIESKSSHPMAAALVDHGRSLSIDPKPENVDDFQNFPGEGVHGRIDGKDIYIGNRKIAIRANCPTVPEIKDDAKDGRTVGYIFCGTTAAGMFSLSDSCRTGAKEAMEELRSLGIKTAMLTGDSSAAALQAQKELGKALETVHAELLPEDKTRLINDFKREGPTAMIGDGLNDAPALATADIGISMGISGSALAIETGDVILMSNDIRKIPKAIRLARKANMKVIENVILSVIPRTAILGLAFAGHPLVWAAVLADVGACVLVILNSMLLLRGTSERKGKKAGKFSATHCSSKHECCHVSSHSDQHGNHSRDLGCNHENSHSHHHHHHVHEDHNSHKKTHDGCLPQNCASTCDSGKTNSSSCKKSKLVDSSSKLDDSAGSVRPYEHEHCVHNQSAQHDHHTHSSCTDHHIEDTHCSPENTQEFCSSWDCASNCQSSKCEKTECTNSPSSLDGSAGSIENHESGCCTHNSRAAQHNHEIQIPKCNSENSHMSNLDHHIDDGCCSHKNTQKVSLPHSKCHSKTYISNPCGKTKCADSTARQDGSSGSLELLQDQKIKKNCTKDECNKRVAMIDGCAKAKGHLEIKHHCNTHFFEKNGTSNRDGHEGAHPDSEAWNGDSSGSINTTIVELEADHLHSKPANTCKPLEKRETGDSCKSCKVECSELKLKQCCPSLEKRGMGGCCKSYTKECCRRRCRRHSDIGTTLRGGLKEIIIE 1136
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 3382907 3391302 - MC06g0418 Mch6g0507 689954
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0507 1136 Gene3D - 5 76 - -
Mch6g0507 1136 Gene3D - 381 642 IPR023214 -
Mch6g0507 1136 MobiDBLite consensus disorder prediction 725 762 - -
Mch6g0507 1136 SFLD Haloacid Dehalogenase 373 643 - -
Mch6g0507 1136 SUPERFAMILY Calcium ATPase, transduction domain A 204 289 IPR008250 -
Mch6g0507 1136 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 6 868 IPR051014 GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER)
Mch6g0507 1136 SUPERFAMILY HAD-like 389 692 IPR036412 -
Mch6g0507 1136 ProSitePatterns E1-E2 ATPases phosphorylation site. 392 398 IPR018303 -
Mch6g0507 1136 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Mch6g0507 1136 PRINTS P-type cation-transporting ATPase superfamily signature 239 253 - -
Mch6g0507 1136 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Mch6g0507 1136 PRINTS P-type cation-transporting ATPase superfamily signature 390 404 - -
Mch6g0507 1136 PRINTS P-type cation-transporting ATPase superfamily signature 537 547 - -
Mch6g0507 1136 ProSitePatterns Hypothetical cof family signature 2. 591 613 - -
Mch6g0507 1136 MobiDBLite consensus disorder prediction 725 743 - -
Mch6g0507 1136 NCBIfam heavy metal translocating P-type ATPase 141 694 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Mch6g0507 1136 FunFam Copper-transporting ATPase 1, putative 179 293 - -
Mch6g0507 1136 CDD P-type_ATPase_HM 91 693 - -
Mch6g0507 1136 Gene3D - 179 293 - -
Mch6g0507 1136 MobiDBLite consensus disorder prediction 1021 1040 - -
Mch6g0507 1136 FunFam Putative cadmium/zinc-transporting ATPase 3 401 523 - -
Mch6g0507 1136 NCBIfam cadmium family heavy metal-translocating P-type ATPase 141 696 - -
Mch6g0507 1136 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0507 1136 PRINTS H+-transporting ATPase (proton pump) signature 623 648 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0507 1136 SUPERFAMILY HMA, heavy metal-associated domain 5 77 IPR036163 GO:0046872(InterPro)
Mch6g0507 1136 ProSiteProfiles Heavy-metal-associated domain profile. 8 73 IPR006121 GO:0046872(InterPro)
Mch6g0507 1136 NCBIfam HAD-IC family P-type ATPase 164 665 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch6g0507 1136 Gene3D - 401 523 IPR023299 GO:0000166(InterPro)
Mch6g0507 1136 SFLD p-type atpase 373 643 IPR044492 -
Mch6g0507 1136 SUPERFAMILY Calcium ATPase, transmembrane domain M 141 384 IPR023298 -
Mch6g0507 1136 Pfam haloacid dehalogenase-like hydrolase 386 605 - -
Mch6g0507 1136 FunFam Putative cadmium/zinc-transporting ATPase 3 4 76 - -
Mch6g0507 1136 Pfam E1-E2 ATPase 200 369 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1625 Mch-Chr2:13514422 Mch6g0507 Mch-Chr6:3382907 8.32E-52 dispersed
Mch6g0507 Mch-Chr6:3382907 Mch6g2674 Mch-Chr6:28440276 1.43E-68 dispersed
Mch6g0507 Mch-Chr6:3382907 Mch6g0513 Mch-Chr6:3459876 7.83E-15 proximal
Mch2g1272 Mch-Chr2:8862725 Mch6g0507 Mch-Chr6:3382907 2.51E-54 transposed
Mch6g0507 Mch-Chr6:3382907 Mch8g2630 Mch-Chr8:29545688 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0507 K01534 - csv:101211188 1465.29