Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0544 ATGCAGAGGCAGACGAGGTATATGGAGAGGACGAACTCGATGAGGGATAAAAGGAGCTTGGAGGGTGCAGAAGATGAGCTGCCGGAGCGAAAGCGACCAGCTCTAGCTAGTGTGATTGTAGAAGCCCTCAAGGTGGATAGTTTACAGAAGCTTTGCTCGTCATTGGAACCAATACTCCGCAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTTCTGGAAGGTCCTCTCCTAAAAGGATTGAAGGTCCTGATGGTAGAAACTTGCAACTGCACTTTAGGTCTAGATTGTCTCTTCCCCTGTTCACCGGAGGGAAAGTGGAAGGTGAACAGGGTGCAGCAATCCATGTTGTTCTGGTTGATGCCAACACGGGCCATGTGGTAACGTCTGGACCTGAAGCCTTATCAAAATTGGACATTGTTGTGCTAGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACAGAGGAAGAATTTGAAAGTCATGTTGTGAAAGAGCGTGAAGGAAAGAGGCCTCTGTTGACTGGGGACCTGCAGGTTACCCTCAAGGAAGGTATTGGAACATTAGGGGATTTGACCTTCACTGATAACTCAAGTTGGATTAGAAGTAGGAAGTTCAGACTTGGCTTAAAGATGGCTTCAGGGTTTTGTGAGGGTATACGTATACGTGAAGCAAAAACTGAAGCTTTTACTGTTAAAGATCATCGAGGAGAATTGTATAAAAAACATTACCCACCTGCATTAAATGATGAAGTGTGGAGATTGGAGAAGATAGGAAAGGATGGTTCATTCCACAAACGTCTAAATAAAAGTGGAATATTCTCAGTTGAAGACTTTCTCCGAATGGTGGTTCGAGATTCTCAAAAATTACGGAGTATCCTTGGAAGTGGTATGTCAAATAAGATGTGGGATGCTCTCTTAGAACATGCTAAGACTTGTGTCCTGAGCGGGAAGCTGTATATTTATTATCCTGAGGAAACAAGAAATGTTGGTGTTGTTTTTAACCATATCTATGAGCTGAATGGCCTGATTACAGGGGAGCAGTACTTTTCTGCTGATTCTCTGTCTGATAGCCAGAAGGTTTATGTAGATACACTAGTGAATAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGAAAGTCACTTTTGAGCTCTAAGCAGCCTAAGAAATCCAATGCATCCCGAAATGAATTTCAAGGAGGTCATCTTGATCTTTCTAATACTTTAGATCATGGGTCAATGTCCCGCATGCCATTATCAGCTCCACCTCAGCAGCCTGTGGTGGATGCAGGACTATCAGTTGCAGGGTATAATGATAATACAGCCACAAGATTTTCAAGCCAGCCTCAGTTTGTGAATTCAACTTCTCGAGCACAGTATGACAATGTCCCATTTACTCCTAATGAGTTGATCGGCAGTTCTAACCAAGTTAATATTACAAGAAATGACGGTGCTTTCGGTTTGGCTCTTGGTCCTCCTCAAGCATCATCTTCGGGGTTCCAGACGATGGGTTCTATTCAGGAATCTAACCTGAATCCGTTTGACTGGTCAAACAATAGAGACAAAGGAGTTGAAGACTTTTTTTCAGAGGATGAGATTCGTATGAGAAGTCACGAAATGCTTGAAAATGAAGATATGCAACATTTGTTGCGAATGTTTAGTATGGGAGGGCATGCGTCTGTTAACGTACATGATGAGGGGTTTTCATTTCCATCATTCATGCCTTCACCAATGCCGAGTTTTGATGACCGCAACCGCTCTGGAAAAGCCGTGGTAGGTTGGTTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGGAAGAAAGCAGCAGAGAGGCGTGCACAGATTGTCGAGTTGGATGAGGAATAG 1908 43.34 MQRQTRYMERTNSMRDKRSLEGAEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARISGRSSPKRIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAAIHVVLVDANTGHVVTSGPEALSKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGIGTLGDLTFTDNSSWIRSRKFRLGLKMASGFCEGIRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKSGIFSVEDFLRMVVRDSQKLRSILGSGMSNKMWDALLEHAKTCVLSGKLYIYYPEETRNVGVVFNHIYELNGLITGEQYFSADSLSDSQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKQPKKSNASRNEFQGGHLDLSNTLDHGSMSRMPLSAPPQQPVVDAGLSVAGYNDNTATRFSSQPQFVNSTSRAQYDNVPFTPNELIGSSNQVNITRNDGAFGLALGPPQASSSGFQTMGSIQESNLNPFDWSNNRDKGVEDFFSEDEIRMRSHEMLENEDMQHLLRMFSMGGHASVNVHDEGFSFPSFMPSPMPSFDDRNRSGKAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELDEE 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3669799 3676920 - MC06g0447 Mch6g0544 689991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0544 635 MobiDBLite consensus disorder prediction 9 30 - -
Mch6g0544 635 MobiDBLite consensus disorder prediction 393 434 - -
Mch6g0544 635 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Mch6g0544 635 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
Mch6g0544 635 PANTHER OS02G0177800 PROTEIN 15 626 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Mch6g0544 635 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
Mch6g0544 635 MobiDBLite consensus disorder prediction 1 30 - -
Mch6g0544 635 MobiDBLite consensus disorder prediction 393 431 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1618 Mch-Chr3:18026017 Mch6g0544 Mch-Chr6:3669799 6.15E-108 dispersed
Mch6g0175 Mch-Chr6:1174955 Mch6g0544 Mch-Chr6:3669799 6.00E-109 dispersed
Mch6g0544 Mch-Chr6:3669799 Mch6g2784 Mch-Chr6:29271784 2.92E-47 dispersed
Mch6g0544 Mch-Chr6:3669799 Mch8g2791 Mch-Chr8:30919145 9.98E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0544 - - - 0.0