Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0557 | ATGGGATCATCTTTCAGCTGCTGTGGTTCAGAAAGATCAGTAGATCGAGGGATCGCCGGGGTTAACAATAATTCATGGAGGATTTTTACGTACAAGGAGTTGCATACGGCTACGAACGGTTTCCATGAGGACAACAAACTCGGGGAAGGAGGATTTGGAAGTGTTTACTGGGGAAAAACAAGCGATGGGCTGCAGATAGCGGTGAAGAAGCTGAAAGCGATGAATTATAAGGCAGAAATGGAGTTTGCAGTGGAAGTGGAGGTGCTTGCGAGGCTAAGGCACAAGAACTTGTTGGGTTTGAGGGGTTACTGTGTGGGGACTGACCAGAGGCTTATAGTTTATGATTACATGCCAAATCTGAGCTTACTGTCTCATCTCCATGGCCAATTTGCTGCTGAAGCTCAATTGGATTGGAAAACAAGAATCAAGATCGCTCTTGGCTCTGCGCAAGGCATTATGTATTTGCACCAAGAGGTAACACCCCACATAATCCACAGAGATATCAAAGCAAGCAACATTTTGTTGGATTCAGATTTTGAGCCACTTGTAGCTGATTTTGGGTTTGCAAAACTAATACCAGAGGGCGTCAGTCACATGACAACTCGAGTGAAAGGAACCTTAGGATATCTTGCTCCCGAATACGCCATGTGGGGTAAGGTTTCAGAGAGTTGTGACGTTTTTAGTTATGGGATTCTTCTGCTAGAGCTCATGACAGGAAGAAAGCCAATAGAGAAACTTCCTGGCGGAGCAAAGAGAACCATTATTGATTGGGTTGACACAATGATAAACAAAGGCAGGTTCAAGGATTTAGCTGATCGTAAGCTAAAGGGACAGCTTAATTGGAAGCAGTTCGAGCACATAATCCATTTGGCAATCATGTGTGTGCATCAGGACCCAAATAAACGGCCTACCATAAAAGAGGTGGTGGAGAGTTTGAAAGGGTTGATGCTTGATAATGGAGAACACAAAGGAAACGTTAAGGCAATGCCTATGAGTGTCCAAAGTGTTAAATATATTGACCATGAAGAGGTGTTTGAAAATGATCGTGTGATCATGAGCAAAGAAGATCGTGGAGCTGGCCCAGAAGAAAGCTTTGATTATGGGGTTTTCAGTGCTATTGAAGAGCAGAAGATGAGAGATTGGAGAATGGTTCAGAAGATATAA | 1164 | 43.64 | MGSSFSCCGSERSVDRGIAGVNNNSWRIFTYKELHTATNGFHEDNKLGEGGFGSVYWGKTSDGLQIAVKKLKAMNYKAEMEFAVEVEVLARLRHKNLLGLRGYCVGTDQRLIVYDYMPNLSLLSHLHGQFAAEAQLDWKTRIKIALGSAQGIMYLHQEVTPHIIHRDIKASNILLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELMTGRKPIEKLPGGAKRTIIDWVDTMINKGRFKDLADRKLKGQLNWKQFEHIIHLAIMCVHQDPNKRPTIKEVVESLKGLMLDNGEHKGNVKAMPMSVQSVKYIDHEEVFENDRVIMSKEDRGAGPEESFDYGVFSAIEEQKMRDWRMVQKI | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3768982 | 3771165 | - | MC06g0459 | Mch6g0557 | 690004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0557 | 387 | PANTHER | OS01G0750732 PROTEIN | 17 | 334 | IPR050885 | - | |
Mch6g0557 | 387 | ProSitePatterns | Protein kinases ATP-binding region signature. | 47 | 70 | IPR017441 | GO:0005524(InterPro) | |
Mch6g0557 | 387 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 116 | - | - | |
Mch6g0557 | 387 | Gene3D | Transferase(Phosphotransferase) domain 1 | 117 | 326 | - | - | |
Mch6g0557 | 387 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 15 | 116 | - | - | |
Mch6g0557 | 387 | Pfam | Protein kinase domain | 41 | 310 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0557 | 387 | CDD | STKc_IRAK | 47 | 315 | - | - | |
Mch6g0557 | 387 | ProSiteProfiles | Protein kinase domain profile. | 41 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0557 | 387 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 312 | IPR011009 | - | |
Mch6g0557 | 387 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 117 | 327 | - | - | |
Mch6g0557 | 387 | SMART | serkin_6 | 41 | 313 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0557 | 387 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 163 | 175 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0208 | Mch-Chr10:1261576 | Mch6g0557 | Mch-Chr6:3768982 | 1.52E-138 | dispersed | |
Mch6g0557 | Mch-Chr6:3768982 | Mch8g1108 | Mch-Chr8:7826337 | 3.87E-139 | dispersed | |
Mch6g0557 | Mch-Chr6:3768982 | Mch8g2657 | Mch-Chr8:29905892 | 1.64E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77467 | PF00069 | Pkinase | 1.10E-47 | CL0016 | Mch | PK |
Pathway information
