Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0591 ATGGCCAAATCCACATCACAACACCTTCAGATTACGGACTCCACCAACAATTTAAATAAAATTTCGATAATGAAGACCAAGACTAAGCGAACTCGGAGGAGCGTCCCTAGGGATTCTCCTCCCCAACGAAGCTCCATTTACCGCGGCGTCACCAGGCATCGATGGACGGGAAGATACGAAGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCGCAGAACAAGAAAGGAAGACAGGGTGCGTATGATGATGAGGAAGCAGCAGCACATGCTTACGACCTTGCAGCATTGAAGTACTGGGGTCAAGAAACCATTCTTAATTTTCCGCTAACATCGTACCAAAAAGAGGTGAAGGAAATGGAGGGTCAGTCGAGAGAAGAATACATTGGATCGTTGAGAAGAAAAAGCAGTGGCTTTTCTCGGGGGGTTTCTAAGTACAGAGGCGTTGCGAGACACCATCACAATGGAAGATGGGAAGCTCGGATTGGGAGGGTGTTTGGCAACAAGTATCTCTATCTCGGAACATATGCGACGCAAGAAGAAGCTGCCACTGCGTACGATATCGCGGCCATAGAATACCGTGGACTCAACGCCGTTACCAATTTCGACCTCAGCCGTTACATAAAGTGGCTAAAACCGAACAACGACGTCGTTTACGACAACAACCACGTCCTAAACGGCGACTCCATCCTCCCAAGCCCTAAACAAGAACTCGACCTAGGTCTCTTCCCGTCGGACCAGAACCAAACCGGCGCCGATTCGGCGATGGCGGAGCCGATTGCATTGGTTCCGTCGCATCGATCGACGACCACCACCACCTCTGCTCTCGGCCTCCTGCTTCAATCCTCCAAGTTTAAGGAAATGATGGAGACGAATTCGGCGGCCGAATTTCCGTCGACGCCGACGTCGTCGTCGGAGCAGATCGAACGTCGGCGGTGTTTGTTTCCCGACGATGTACAGACGTTATTTGCTTGCGATAGCTCCGGCTCTTACTGCTATGGAGAAGCAGACGATGCTATGTTCAGCGACTTCAACTCTTTCGTACCGCCGCCATTGTCGCAGTACGACGATTTGGACGATTAG 1083 50.6 MAKSTSQHLQITDSTNNLNKISIMKTKTKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQETILNFPLTSYQKEVKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDIAAIEYRGLNAVTNFDLSRYIKWLKPNNDVVYDNNHVLNGDSILPSPKQELDLGLFPSDQNQTGADSAMAEPIALVPSHRSTTTTTSALGLLLQSSKFKEMMETNSAAEFPSTPTSSSEQIERRRCLFPDDVQTLFACDSSGSYCYGEADDAMFSDFNSFVPPPLSQYDDLDD 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4024548 4027162 - MC06g0489 Mch6g0591 690038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0591 360 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 32 247 - -
Mch6g0591 360 ProSiteProfiles AP2/ERF domain profile. 46 109 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 MobiDBLite consensus disorder prediction 26 45 - -
Mch6g0591 360 FunFam AP2-like ethylene-responsive transcription factor 144 205 - -
Mch6g0591 360 Gene3D AP2/ERF domain 144 205 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 Gene3D AP2/ERF domain 46 111 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 Pfam AP2 domain 144 195 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 FunFam AP2-like ethylene-responsive transcription factor 45 111 - -
Mch6g0591 360 CDD AP2 144 205 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 SMART rav1_2 145 209 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 SMART rav1_2 46 115 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 SUPERFAMILY DNA-binding domain 45 110 IPR016177 GO:0003677(InterPro)
Mch6g0591 360 SUPERFAMILY DNA-binding domain 144 205 IPR016177 GO:0003677(InterPro)
Mch6g0591 360 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 PRINTS Ethylene responsive element binding protein signature 185 205 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch6g0591 360 ProSiteProfiles AP2/ERF domain profile. 145 203 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0591 Mch-Chr6:4024548 Mch9g0483 Mch-Chr9:3560491 1.90E-134 dispersed
Mch6g0591 Mch-Chr6:4024548 Mch8g0606 Mch-Chr8:4348038 1.07E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43532 PF00847 AP2 3.60E-09 CL0081 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0591 K09285 - csv:101219103 608.601