Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0608 ATGGCGGCGAAAACTGAAGGCAAAGCCATAGGCATCGATCTCGGCACCACGTACAGCTGCGTCGGGGTTTGGCTCAACGATCGTGTGGAGATTATCCCTAACGATCAAGGTAACCGAACCACTCCCTCTTATGTAGCTTTCACCGAAACCGAGCGATTAATCGGCGATGCGGCGAAGAATCAGGTTGCTATGAACCCTCAGAACACTGTCTTCGACGCCAAGCGCTTGATCGGCCGGCGGCTTTCCGATCCCTCTGTCCAGAGCGATATGAAGCTCTGGCCGTTCAAAGTGATTGCCGGACCTGGCGACAAGCCGATGATCATCGTCAACTACAAAGGCGAAGAGAAGCAGTTTGCTCCGGAGGAGATTTCGTCTATGGTTCTGATTAAGATGAGGGAGGTCGCCGAAGCTTTTCTAGGGCAAAGTATTAAGAACGCCGTGATCACAGTCCCTGCTTATTTCAACGATTCGCAGAGGCAAGCGACAAAAGATGCCGGTGCCATTGCGGGGCTTAACGTGATCCGTATCATCAACGAGCCGACGGCGGCCGCAATCGCGTACGGTTTGGACAAAAAGGCCTCTCGTAAAGGCGAACAGAACGTGCTGATCTTCGACCTCGGCGGTGGAACTTTCGATGTGTCACTCTTGACCATTGAGGAAGGGATCTTCGAGGTCAAGGCCACCGCCGGCGATACTCATCTCGGCGGCGAGGATTTCGACAACCGATTGGTCAATCACTTCGTCACAGAGTTCAGGAGGAAGAACAAGAAGGATATCAGCGGCAGCGCGAGGGCGCTGAGGAGGCTGAGGACCGCCTGCGAGAGAGCAAAAAGAGCGCTCTCATCGACCACGCAGACGACGATTGAAGTTGATTCTCTTTACGAAGGAATTGACTTCTATGCGACGATAACGAGGGCTAGATTCGAGGAATTGTGTATGGATATGTTCATGAAGTGTATGGAACCAGTTGAGAAATGCATCCGTGATGCTAAAATCGATAAAATCCAAGTTCATGAGGTCGTTTTGGTCGGTGGATCGACAAGAATTCCGAAAGTTCAGCAGCTTTTGCAGGATTACTTCAACGGGAAGGAGCTCTGTAAAAGCATTAACCCCGATGAGGCTGTTGCTTACGGTGCTGCTGTTCAGGCTGCAATTCTGAGCGGAGAAGGCGACGAGAAAGTTCAAGATCTTCTGCTGCTGGACGTGACGCCGCTCAGTCTCGGTCTAGAGACCGCCGGCGGCGTGATGACAGTCCTAATTCCAAGGAACACCACAATCCCAACAAAGAAGGAACAGATTTTCTCCACATACTCCGACAATCAGCCAGGGGTTTTGATCCAAGTTTACGAAGGAGAGCGAGCGAGAACCAAAGACAACAATCTGCTCGGCAAATTCGAGCTGACGGGCATTCCTCCGGCGCCCCGAGGCGTGCCCCAAATCAACGTCATGTTCGACATAGACGCCAACGGCATCCTGAACGTGACTGCAGAGGACAAGACGGCGGGGGTGAAGAACAAGATCACGATCACGAACGACAAGGGGCGGATGAGCAAAGACGAGATAGAGAGGCTGGTGAAGGAGGCGGAGAAGTACAGAGCAGAGGATGAGGAAGTGAAGAAGAAGGTGGAGGCGAAGAATGCGTTGGAGAATTATGCGTACAATATGAGGAACACGGTGAGGGATGAGAAGTTTGCTGGGAAATTGGATCCAGATGACAAGAACAAGATTGAGAAGTCGGTGGAGGAGACGATCGAGTGGTTGGATAGGAACCAGTTGGCGGAGGTTGATGAGCTTCAGGACAAGCTCAAGGATTTAGAAGGGGTTTGTAATCCGATCATTGCGAAGATGTACCAGGGCGGCAGCGCCGGCGCCGGCTTTCCGATGGGTGAGGATATGCCTGGTGGCTCTTCCGCCGAGTCCAGCGGCGGTGCTGGGCCCAAGATTGAGGAGGTGGATTGA 1959 52.63 MAAKTEGKAIGIDLGTTYSCVGVWLNDRVEIIPNDQGNRTTPSYVAFTETERLIGDAAKNQVAMNPQNTVFDAKRLIGRRLSDPSVQSDMKLWPFKVIAGPGDKPMIIVNYKGEEKQFAPEEISSMVLIKMREVAEAFLGQSIKNAVITVPAYFNDSQRQATKDAGAIAGLNVIRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFRRKNKKDISGSARALRRLRTACERAKRALSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDMFMKCMEPVEKCIRDAKIDKIQVHEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVMFDIDANGILNVTAEDKTAGVKNKITITNDKGRMSKDEIERLVKEAEKYRAEDEEVKKKVEAKNALENYAYNMRNTVRDEKFAGKLDPDDKNKIEKSVEETIEWLDRNQLAEVDELQDKLKDLEGVCNPIIAKMYQGGSAGAGFPMGEDMPGGSSAESSGGAGPKIEEVD 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4139539 4142519 + MC06g0501 Mch6g0608 690055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0608 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Mch6g0608 652 Gene3D - 10 384 - -
Mch6g0608 652 Coils Coil 266 286 - -
Mch6g0608 652 Coils Coil 588 608 - -
Mch6g0608 652 Gene3D - 192 366 - -
Mch6g0608 652 FunFam Heat shock 70 kDa protein 197 268 - -
Mch6g0608 652 FunFam Heat shock protein 70 10 196 - -
Mch6g0608 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Mch6g0608 652 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Mch6g0608 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Mch6g0608 652 Gene3D - 545 619 IPR029048 -
Mch6g0608 652 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Mch6g0608 652 SUPERFAMILY Actin-like ATPase domain 196 388 IPR043129 -
Mch6g0608 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
Mch6g0608 652 Gene3D - 71 126 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 58 66 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 396 415 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 36 48 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 209 219 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 369 389 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 146 166 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 477 493 - -
Mch6g0608 652 PRINTS 70kDa heat shock protein signature 337 353 - -
Mch6g0608 652 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Mch6g0608 652 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Mch6g0608 652 FunFam Heat shock protein 70 546 619 - -
Mch6g0608 652 Coils Coil 514 545 - -
Mch6g0608 652 FunFam Heat shock 70 kDa 391 545 - -
Mch6g0608 652 Gene3D Actin; Chain A, domain 4 235 318 - -
Mch6g0608 652 FunFam Heat shock 70 kDa 235 318 - -
Mch6g0608 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mch6g0608 652 MobiDBLite consensus disorder prediction 621 652 - -
Mch6g0608 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Mch6g0608 652 FunFam Heat shock 70 kDa protein 71 126 - -
Mch6g0608 652 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0731 Mch-Chr1:11173406 Mch6g0608 Mch-Chr6:4139539 0 dispersed
Mch4g2139 Mch-Chr4:23372273 Mch6g0608 Mch-Chr6:4139539 0 dispersed
Mch5g0606 Mch-Chr5:4024541 Mch6g0608 Mch-Chr6:4139539 6.21E-85 dispersed
Mch6g0608 Mch-Chr6:4139539 Mch9g0474 Mch-Chr9:3511734 2.64E-291 dispersed
Mch6g0608 Mch-Chr6:4139539 Mch4g2128 Mch-Chr4:23316148 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0608 K03283 - csv:101215564 1200.27