Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0611 ATGCAGCAAGGTGATCAGACGGTGCTAAGCTTGAGACCTGGTGGCGGTCGAACTAGACTCCTTGGTCCTCGCTTCGACCTTTCATCCTCTTCATCTTCGTCTTCTCTTGCCTTCGGTTCCTTTTCCTCCGATCTCCCTGCCCTCCGCCCCCATGGCGCTCCTCCCGCTTCCTTTTCTCTGAAGGCTGGAGATTCACGGTTTGAGGGTCGCGAGCGTGTTCGATTTACCCGAGATCAGCTTTTGCAGCTTCGGGAGATTGTGGAAGTTCCAGATGATATACTAAAACTTAAACGGGAAATTGAAGTGGAAGTTTTTGGCGAGGAACAAAGTTGGAGTCGTGGAGAGAGCAATCAACCTAATCAGTCTCAGAATCGCTATTCTGAGCCTGACAATCGTGACTGGCGTGGCCGTTCTGCCCAATTCTCTGCTACTGGAGAGGACAGGTCCAGGGAAACTATTCGAGATAGAGATTTTGGTGGTCATTTTGACTCAAGGCAACAAGAGGGAAATCAATCGAGTCGTCAAGACTCGAACTCATCTTGGACCCGTACCACTTCTAACCAAGGGGGAGCACCTGCTGCTTTAATCAAAGCTGAGGTACCATGGTCAGCTAGGAGAGGAAGTCTCTCTGAAAAGGATCGTGTCTTGAAGACTGTAAAGGGGATATTGAACAAGCTAACGCCAGAAAAATTCGATCTCCTTAAGGGTCAGCTAATTGACTCTGGAATCACCTCCGCCGATATTTTGAAGGATGTCATTTCACTGATATTTGACAAGGCTGTTCTTGAGCCCACATTTTGCCCCATGTATGCTCAATTGTGTTCTGATCTGAATCTGAAGCTGCCTCAATTCCCCTCTGATGAACCTGGTGGAAGGGAAATTACTTTTAAACGAGTCCTCTTAAACATCTGCCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTAGGCAGATGACTGCCCCTGAGCAAGAGATGGAGCGCAGAGATAAAGAAAGACTGGTCAAGCTTCGTACACTTGGGAATATTCGATTAATTGGAGAGCTTCTAAAGCAAAAGATGGTGCCTGAGAAGATTGTCCACCACATTGTGCAGGAACTTTTAGGACCAGATAACAAAACCTGTCCTGCTGAAGAAAATGTGGAGGCCATTTGTCAGTTCTTTAACACCATAGGTAAGCAGCTAGATGAGAATGCAAAGTCACGTCGTATAAATGATATGTACTTTGGCCGATTGAAAGAACTGACTACGCACCCTCAGTTGGCACCACGATTGAAGTTCATGGTCCGTAATGTTCTTGATTTGCGTGCCAACAATTGGGTTCCTAGGCGGGAAGAGATTAAAGCCAAAACTATTACTGAAATACATTCAGAGGCAGAAAGAAATCTGGGACTACGTCCTGGTGCTACCGTCAATATCAGAAATAGTCGTGGAGTTGTGTCTGGTTCTGCTGGGAACACCAGCCCCGGGGGCTTTCCTATTAATCGACCTGGTTTTGGGGGTATGATGCCTGGCATGCCAGGAACCAGGAAGATGCCTGGTATGCCAGGAATTGATAATGACAATTGGGAGGTACCTAGGTCACGGCCTATACCAAGGGGCGGAGATGGATCGGGTACCCAACCTGCTGGACGTGGTGGCCAAACACCTTTGGTTGGCAAAGCACCAATGTTGAATGCAAGACTACTACCCCAGGGTACTGGTGGATCCATTAGTAACAAGACTAGTGCTCTATTGCAGGGTGCAGGTGCATCTACCACTCGTCCCGTTAACTTTGGTCCTGGCTTGGAGCCCTCTAGTCAGGTTCAAAAACCTGTTACGGCAGCAGCAGTCCTTCCACTTGCCGAGAAACCACAGGTTCCAGCTGCATCTTCCAAACAAGATGATCTTGAAAAGAAAACTCTCTCTCTTCTTGAGGAATATTTCAGTGTCCGACTTTTGGATGAAGCTTTACAGTGCGTGGAAGAACTCGTGTCACCAGCTTACCACCCTGAGATTGTAAAACAAGCCATATCCTTAGCACTAGAGAAAATTCCACCCTGTGTTGAAGCAGTTGTTAAGCTTCTGGACTATTTACTTTCCAAGAAAGTTTTTACAGCTGGAGACATAGGGACTGGATGTTTGCAATACGCTTCTGAGATCGATGACGTGGGCATCGATTTACCAAAAGCACCAATGAATTTTGGTGAGATAATTGGGAAACTTGTCATATCTGGTGGTTTGGATTTCCAGGTGGTGAAGGAGGCCCTTAAGAAGGTGGAAGATGACAGGTTCAGGAAAGATATATTTGATGCTGTCTTGAAGGCAGTTAGTTCTAATGCGTCTGGGCAAGGATTATCAGATTCGTTGGAGTCTGACATCGAGGCATGTCGAAGCCTGGCATATTAA 2394 46.95 MQQGDQTVLSLRPGGGRTRLLGPRFDLSSSSSSSSLAFGSFSSDLPALRPHGAPPASFSLKAGDSRFEGRERVRFTRDQLLQLREIVEVPDDILKLKREIEVEVFGEEQSWSRGESNQPNQSQNRYSEPDNRDWRGRSAQFSATGEDRSRETIRDRDFGGHFDSRQQEGNQSSRQDSNSSWTRTTSNQGGAPAALIKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNLKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENAKSRRINDMYFGRLKELTTHPQLAPRLKFMVRNVLDLRANNWVPRREEIKAKTITEIHSEAERNLGLRPGATVNIRNSRGVVSGSAGNTSPGGFPINRPGFGGMMPGMPGTRKMPGMPGIDNDNWEVPRSRPIPRGGDGSGTQPAGRGGQTPLVGKAPMLNARLLPQGTGGSISNKTSALLQGAGASTTRPVNFGPGLEPSSQVQKPVTAAAVLPLAEKPQVPAASSKQDDLEKKTLSLLEEYFSVRLLDEALQCVEELVSPAYHPEIVKQAISLALEKIPPCVEAVVKLLDYLLSKKVFTAGDIGTGCLQYASEIDDVGIDLPKAPMNFGEIIGKLVISGGLDFQVVKEALKKVEDDRFRKDIFDAVLKAVSSNASGQGLSDSLESDIEACRSLAY 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4157615 4164277 + MC06g0503 Mch6g0611 690058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0611 797 SUPERFAMILY ARM repeat 628 784 IPR016024 -
Mch6g0611 797 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 107 795 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Mch6g0611 797 MobiDBLite consensus disorder prediction 24 41 - -
Mch6g0611 797 SUPERFAMILY ARM repeat 210 444 IPR016024 -
Mch6g0611 797 MobiDBLite consensus disorder prediction 110 127 - -
Mch6g0611 797 SMART ma3_7 632 744 IPR003891 -
Mch6g0611 797 MobiDBLite consensus disorder prediction 530 555 - -
Mch6g0611 797 ProSiteProfiles MI domain profile. 631 753 IPR003891 -
Mch6g0611 797 MobiDBLite consensus disorder prediction 107 193 - -
Mch6g0611 797 Gene3D - 626 792 - -
Mch6g0611 797 FunFam Eukaryotic translation initiation factor isoform 4G-2 207 442 - -
Mch6g0611 797 MobiDBLite consensus disorder prediction 1 45 - -
Mch6g0611 797 MobiDBLite consensus disorder prediction 164 191 - -
Mch6g0611 797 Pfam MA3 domain 632 744 IPR003891 -
Mch6g0611 797 Gene3D - 207 442 - -
Mch6g0611 797 SMART if4_15 216 441 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch6g0611 797 MobiDBLite consensus disorder prediction 147 163 - -
Mch6g0611 797 Pfam MIF4G domain 216 441 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1391 Mch-Chr3:16427976 Mch6g0611 Mch-Chr6:4157615 7.16E-09 dispersed
Mch5g0233 Mch-Chr5:1545586 Mch6g0611 Mch-Chr6:4157615 1.63E-46 dispersed
Mch6g0611 Mch-Chr6:4157615 Mch7g0816 Mch-Chr7:12776547 1.17E-47 dispersed
Mch11g0492 Mch-Chr11:3121521 Mch6g0611 Mch-Chr6:4157615 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0611 K03260 - csv:101207520 1319.29