Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0629 ATGGCGTTGTTGCGGAAATTGTTCTTCCGGAAGCCACCGGATGGGCTTCTCGAGATCTGTGAAAGAGTTTACGTTTTCGATTGCTGTTTTACCACGGATGCTTGGAAGGAAGAGAATTATGAAGTTTACTTAGGTGGAATAGTTGCTCAACTCCGAGAACATTTAGCAGATGCTTCATTCTTGGTATTCAATTTTCGGAAATTAGAGATGCAAAGTCAGGTGGGTGATATCTTATCTAAGTACGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGATGCCCAGTTCTGACAATGGAAGTGATCCACCATTTTCTAAGATCATGCGAAAGTTGGCTTTCCCTTGGACTGAATAATGTTTTGTTAATGCACTGTGAACGTGGTGGTTGGCCAGTTTTAGCTTTCATGCTTTCGGCACTCTTGATATATAGGAAACAGTATAGTGGGGAGCAAAGAACATTGGACATGGTTTATAGGCAGGCACCTCGTGAGCTTTTGCATCTCTTGTCTTCTGTGAATCCAGTTCCTTCTCAATTAAGGTATCTGCAGTATGTTGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTATGGACAGAGCTCTCACTTTGGATTGTATCATTCTGAGATTTATTCCAAATTTTGATGGAGAGGGTGGTTGCCGTCCAATATTTCGAATATATGGACAGGATCCTCTCCTTGTCAGTGACCGAACTCCTAAAGTTCTGTATTCAACTCCAAAAAGAAGCAAAAATATCCGTACTTACAAACAGGCAGAATCAGAACTGGTTAAGATAGATGTTAATTGCCACATTCAAGGAGATGTTGTTCTTGAGTGCATCACTTTGCATGATGACATGGAACTTGAAGAGATGATGTTCAGAGCAATGTTTAATACAGCTTTTATACGGTCTAATATTTTAATTCTCAACCGTGAAGAGATCGATACATTGTGGAATGCTAAAGATAAATTTCCAAAAGTCTTCCGAGCAGAGATTATTTTCTCTGAGATGGATGCTGGAGCTTCTACTGTCGCGAGCGATATACTTTGCTTTGATGAGGAAGGTCTTCCCATGGAAGCATTTGCTAAAGTGCAAGAGATCTTTAGTCATGTGGATTGGTTAGATCCCAAAGCGGATGTGGCCCTTAATGTGCTCCATCAGATGAATGCCTTGAACATAAACCAAGATAAGTCGGACAACAATTCTCTTTGGAGTGCGCAAATGACTCCTTTACTTCAGTCTACAAGTCCCAGAAACCTTCAGCAGAAGAAGTCCACGTTGGAGAACAAAACCAAAATCCTAGAGAAGGAAGAATCTATTCGAACATCTAAAATTTCCCCGGATGCTGCTAAAACTGAACAGAACAATGAGTTACAAGCTACAGTAGTTGGCCCTCACCTGAGCAATCAATCTGCTTCAGGACGCCAACTGGTGCAAGATTCACCCAATTCACAGAGAAGAGATGGGACCTCATACAGTGCTTCAATTGGAAGCCATTCGTTACATGATTATGAAGGAGAAGCAGAGGTTTCTCATTTGAAAACTCAATCTTCAGCTCTTTCGAATGCAGCATTGGCGGTTTCCCTTGCACCTGAATCTCTTCAGAATAAAAGTGTCCTTACAAAAACAACACCACCGCCTCCTCCTCCTCTCCCCCAACTTCCCACGACTATTTCTTCTGCTGATTGTCTACTTCATCCTCCCCCGCCTCCAGCTGCACCACCACTCCCATCTAATAACTTTTCAACTCCAAGACCAGATAAATCATCGCTTACCAAGGAAATAGAAAGTCAGTTATCAACCATTAGCCCTCCACTATCTGTAACCTCTGCAATTAATTTCTCATTAGAGTCTTCTCCACCACCTCCTCCACCTCCACCTCCTTCTACACCTCCATTGAAGGAAACCATAGCGGTTAGAGTTAAAGCTTCTCCACCTACGCCCCCTCCTTTTCCTTCTACACTAGCTTCCTCTCCTAAAATTGCATCTTTAGTGCCTCAACCACCACCACCTCCTCCTTCTCCAATATCCACTGTAAATCATAAAATTTCATCCCCAATCCCTTCACCACCACCTCTTCCGCCTCCTCCAATGGTCATCACAGATCCCAAAATTTCCTCTCCAGTGCCTCCACCACCACCTCCTCTTCTTATGACGTCCACACAGGTTGAGAGTATTTCAACTTCTACATCTCTTCCTCCTCCACCGCCACCTCCTCTTCCTCTGATGTCCGGACAAGATGGAAGTACTTCAACATCTTCATCTCTTCCTCCACTGCCACCGCCTCTTCCATCCAGACAGGTTGGAAGTGCTTCAACATCTCCATCTGTACCTCCTCCACCGCCACCACCTGCTTCCACCACGGGCTCCTCCCCACCTGTTCCTTCTGCTCCCCCTCCTCCCACCCTTCCAGGGAAAGGGATTTCAAAATCTGGTGACCCGTTTCCTGGTTCTCTTGGCTCATCTAGGTCTTCCTCTCCCGTGCCACCAAGTATTTCTCCATCCAGTGGAAAGGGACGGAGTTTGTCACGCACTATAAGTTCAAGAACACATATAACCAAGAAACTGAAGCCATTGCATTGGTTAAAGTTATCTAAAGCAGTGCAAGGAAGCTTATGGGCTGAAACTCAAAAAACTGGTGAAGCTTCCAGAGCACCAGAGATTGACATGTCAGAGCTTGAAAGTCTTTTCTCAGCGGCAGTTCCTGCTCCTGATCAGCAGAAGTCAGGTGCACGAGGCTCAGTTGGAAATAAATCCGAGAAAGTGCAACTGATTGATCACAGGCGAGCTTACAACTGTGAGATCATGCTTTCAAAGGTCAAGGTGCCTTTGCATGACTTAATGAGTTCTGTGCTTGACCTTGAAGATTCAGCACTGGATATCGATCAGGTTGAGAATCTTATTAAGTTTTGTCCCACAAAGGAGGAAATGGATTTACTTAAGGGCTACAACGGAGAAAAGGAGAAGCTTGGAAAATGTGAACAGTTTTTCTTAGAGTTGATGCAAGTACCTCGTGTAGAATCTAAACTTCGAGTTTTTTCATTCAAGATACAGTTCAGTTCTCAGGTCACAGATCTTAAAAAAAGCCTGAACTTTGTTAACTCTGCTGCAGAAGAGATAAAAAATTCAGTCAAGTTCAAGAGAGTCATGCAGACAATACTCTCTCTGGGAAATGCTTTAAACCAGGGAACAGCAAGGGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTGACAGACACTCGTGCAAGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATACTTTCTGACAAACTGCCAGAAGTTCTGGATTTTTCTCAAGATCTTGCAAGCTTGGAGCCTGCATCAAAGGTACAATTGAAGGTTTTGGCAGAAGAAATGCAAGCAATAAGCAAAGGGTTGGAGAAAGTTGTTCAAGAACTGTCTACATCTGAAAATGATGGCCCTATATCCAATAACTTCAGAAAGGTTTTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGAGAACTTTGGCTTCGCTGTACTCTAGCGTGGGTAGAAATGTAGATTCTTTGATTCTTTATTTTGGAGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACATTATGCAACTTTGTGAGAATGTTTAACCGAGCCCACGAGGAAAACTGCAAGCAGATTGAGCTTGAAATGAAGAAAGCAACTGAAAGCGAAAAATCAAAGACGGGGCACTTGCATAAGAAGACAAGACGATTGTCACACTCCCAAATTGAGATTGGCAACGTCAACATCAAGAATGGTGATATTCCCTTTGACATTTTATCCTGGTTGCCAACGGAGACTCTTCTTGAAATGAGGTGCGTTTCTAAAGAGTGGTATCAACTTATTTTAGACCGCTCATTCGTACAGGAACAGTTTCAGAAGACCGGATTGACGTTATCAGGTTTCATCTTTCAAGAGAACTACCAATCATGTATTGACGATATAAGAACATTTAGCTATATTTCAGTAAATGCAGATTCTAAGGTGCATAAAATGGTCATTGATTTCCTGCCCGAGGATGTTGTTATTTTGGCATCCTGTAATGGCCTTGTTTGTTGTAGAAGTTGCTTCCCTACACAGCACCCTACAATCTATGTCTGCAATCCCTTCTTCAAGAAATGGGTAAGTTTTGAAGTGCCTCAGCTGGACAAAAGAAGCAACATTGCTCTGGTATTTGATCCCATTAGGGACCCTATCAACACGTCGACAAATTTCAAAATAGTAAGAATTCAGCAGTTAGAGAATGAACAAGAGGAAAGGTACTACACGTTTAAAACATACTCTGCAGAAACAGGAGCCTGGAAGGAATCGAATGAAGTTTGCTATTCAAATGGCAATTTGTCCAAGAACAAAGGCATTTATGCTAAAGGGACCTTACATTGGCTTACTGATTCGGATCAGATCCTTACATTTGATACGGAGAAAGAACTGTCTCTCTTAATTCCATCTCCAATTCCTGCCATGGAAGTTTTCATCAACGTCCCTGGAACATGCATAGGAGAATCCAAGGGCCTACTGCATTTCATCATGATCTGCGAATATGGAATTATTGTATGGTGTCTGGAAGACTATTTTGAGACAAAATGGATGCTCAAACATTCAAAACGGCTCCAAGTGATTGAGGAAGAGAACCCAAAGATGTTTTTCAAACTATACAACAGCACGCAACATAAAGTGGTTAAAGGTATGGATCCATGGATAAATCCCATAGCATTTAAAGATGAGGTTCTATTGATGAGGGTGTATGGAATTTTCTATTCATACCACACTGAAACAGGCAAGGTGGTGGAAGTTTGTTCGCTTAACAGTTTGGGTCCAAACCCCTGGGCTGATCCTTCAGTGCTTCCTTATTCCTTGAGCTTGGTTCCCTTGGACGTTTCTCCCTCAAAATCCGACTCAAATAGCAACAGAAATCCC 4968 42.77 MALLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWKEENYEVYLGGIVAQLREHLADASFLVFNFRKLEMQSQVGDILSKYDMTIMDYPQQYEGCPVLTMEVIHHFLRSCESWLSLGLNNVLLMHCERGGWPVLAFMLSALLIYRKQYSGEQRTLDMVYRQAPRELLHLLSSVNPVPSQLRYLQYVARRNVALEWPPMDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPLLVSDRTPKVLYSTPKRSKNIRTYKQAESELVKIDVNCHIQGDVVLECITLHDDMELEEMMFRAMFNTAFIRSNILILNREEIDTLWNAKDKFPKVFRAEIIFSEMDAGASTVASDILCFDEEGLPMEAFAKVQEIFSHVDWLDPKADVALNVLHQMNALNINQDKSDNNSLWSAQMTPLLQSTSPRNLQQKKSTLENKTKILEKEESIRTSKISPDAAKTEQNNELQATVVGPHLSNQSASGRQLVQDSPNSQRRDGTSYSASIGSHSLHDYEGEAEVSHLKTQSSALSNAALAVSLAPESLQNKSVLTKTTPPPPPPLPQLPTTISSADCLLHPPPPPAAPPLPSNNFSTPRPDKSSLTKEIESQLSTISPPLSVTSAINFSLESSPPPPPPPPPSTPPLKETIAVRVKASPPTPPPFPSTLASSPKIASLVPQPPPPPPSPISTVNHKISSPIPSPPPLPPPPMVITDPKISSPVPPPPPPLLMTSTQVESISTSTSLPPPPPPPLPLMSGQDGSTSTSSSLPPLPPPLPSRQVGSASTSPSVPPPPPPPASTTGSSPPVPSAPPPPTLPGKGISKSGDPFPGSLGSSRSSSPVPPSISPSSGKGRSLSRTISSRTHITKKLKPLHWLKLSKAVQGSLWAETQKTGEASRAPEIDMSELESLFSAAVPAPDQQKSGARGSVGNKSEKVQLIDHRRAYNCEIMLSKVKVPLHDLMSSVLDLEDSALDIDQVENLIKFCPTKEEMDLLKGYNGEKEKLGKCEQFFLELMQVPRVESKLRVFSFKIQFSSQVTDLKKSLNFVNSAAEEIKNSVKFKRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKILSDKLPEVLDFSQDLASLEPASKVQLKVLAEEMQAISKGLEKVVQELSTSENDGPISNNFRKVLKEFLRFAEAEVRTLASLYSSVGRNVDSLILYFGEDPARCPFEQVMSTLCNFVRMFNRAHEENCKQIELEMKKATESEKSKTGHLHKKTRRLSHSQIEIGNVNIKNGDIPFDILSWLPTETLLEMRCVSKEWYQLILDRSFVQEQFQKTGLTLSGFIFQENYQSCIDDIRTFSYISVNADSKVHKMVIDFLPEDVVILASCNGLVCCRSCFPTQHPTIYVCNPFFKKWVSFEVPQLDKRSNIALVFDPIRDPINTSTNFKIVRIQQLENEQEERYYTFKTYSAETGAWKESNEVCYSNGNLSKNKGIYAKGTLHWLTDSDQILTFDTEKELSLLIPSPIPAMEVFINVPGTCIGESKGLLHFIMICEYGIIVWCLEDYFETKWMLKHSKRLQVIEEENPKMFFKLYNSTQHKVVKGMDPWINPIAFKDEVLLMRVYGIFYSYHTETGKVVEVCSLNSLGPNPWADPSVLPYSLSLVPLDVSPSKSDSNSNRNP 1656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4253783 4273739 + MC06g0520 Mch6g0629 690076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0629 1656 MobiDBLite consensus disorder prediction 583 617 - -
Mch6g0629 1656 MobiDBLite consensus disorder prediction 468 499 - -
Mch6g0629 1656 Pfam Formin Homology 2 Domain 854 1220 IPR015425 -
Mch6g0629 1656 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Mch6g0629 1656 Gene3D - 200 340 - -
Mch6g0629 1656 SUPERFAMILY F-box domain 1272 1316 IPR036047 GO:0005515(InterPro)
Mch6g0629 1656 SMART PTEN_C2_2 197 337 IPR014020 -
Mch6g0629 1656 SMART fbox_2 1272 1308 IPR001810 GO:0005515(InterPro)
Mch6g0629 1656 MobiDBLite consensus disorder prediction 664 678 - -
Mch6g0629 1656 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Mch6g0629 1656 PANTHER FORMIN-J 651 1244 IPR051144 -
Mch6g0629 1656 MobiDBLite consensus disorder prediction 775 806 - -
Mch6g0629 1656 MobiDBLite consensus disorder prediction 618 634 - -
Mch6g0629 1656 MobiDBLite consensus disorder prediction 816 850 - -
Mch6g0629 1656 MobiDBLite consensus disorder prediction 686 719 - -
Mch6g0629 1656 Gene3D Protein tyrosine phosphatase superfamily 15 199 IPR029021 -
Mch6g0629 1656 SUPERFAMILY Formin homology 2 domain (FH2 domain) 780 1236 - -
Mch6g0629 1656 SMART it6_source 542 1288 IPR015425 -
Mch6g0629 1656 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 186 IPR029021 -
Mch6g0629 1656 ProSiteProfiles Formin homology-2 (FH2) domain profile. 847 1245 IPR015425 -
Mch6g0629 1656 Coils Coil 1220 1240 - -
Mch6g0629 1656 Gene3D - 1269 1359 - -
Mch6g0629 1656 Gene3D Formin, FH2 domain 846 1230 IPR042201 -
Mch6g0629 1656 Pfam C2 domain of PTEN tumour-suppressor protein 198 337 IPR014020 -
Mch6g0629 1656 Pfam F-box domain 1275 1304 IPR001810 GO:0005515(InterPro)
Mch6g0629 1656 MobiDBLite consensus disorder prediction 565 582 - -
Mch6g0629 1656 MobiDBLite consensus disorder prediction 539 850 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1721 Mch-Chr3:18729607 Mch6g0629 Mch-Chr6:4253783 1.76E-267 dispersed
Mch6g0257 Mch-Chr6:1676940 Mch6g0629 Mch-Chr6:4253783 5.38E-287 dispersed
Mch6g0258 Mch-Chr6:1701803 Mch6g0629 Mch-Chr6:4253783 1.39E-115 dispersed
Mch6g2234 Mch-Chr6:24548290 Mch6g0629 Mch-Chr6:4253783 5.12E-275 transposed
Mch11g0505 Mch-Chr11:3197963 Mch6g0629 Mch-Chr6:4253783 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0629 K28090 - csv:101221713 1795.02