Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0634 ATGCAGCCCTGTAGCAGAGAAATGCAAGGCTTGAACTCTCTGTTGAACCACTCCCAAATCTCCCTTCAGGATCTCCACAACGACCACCACAATCACTTGAACCCGGCGGCGGCGCCGCCACAGATCCCGCCGTCTCACCTTCACCATTTCGATCCTGCCACCTCCCACGACGATTTCCTCGAGCAAATGCTCAATACTATCCCCTCCTGTTCGTGGCCCGACATGAATCCTCCAAACCCTAAATCCCCCTGGGACCTAAACCCTATCAATAAGCCTAGAGAACTCTCCGACGACGCCCTCCACTTGGACCACGACTCCGCCGCCCTCGCCTCCAAGCTCCGGAGCCACCAGATCAGCGGCAACTCTGCGGCCGCTAAGGCAGCCGTCATGCTCCAGCAACAGCTTCTCTTGAACAGAGGGATGACCGCCGGAAATGGCGTCGCCGACCACGGCCTCCCTCCCATGCCTCTCTCGCTCGGGAATGGCGATTTGGATCGCTCTCAAAACGACGTCGTCGACGGATCCTGCTTCCGGCCACCGAACTCGGGAGGTTCTATGCAATCGCATAGTTTCGGAGCCCCGGGAAACGGGATGAACCAAGCTCCGGCGAGTGGTTCCGTCGGAGTTTCTCCATCGCAGCCGAAGCAGAAGGTCAGAGCTCGTAGAGGCCAAGCCACTGACCCCCACAGTATCGCCGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTCGTTCCCAATGCCAATAAGACAGACAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAGTTCCTCCAGCTTCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGGGGCGCGGCTGCTGTTGCTCCACTTGTTGCTGACGTCTCCTCTGAGGGGGGCGGTGAGTGTATGCAAGGAAGTGGGGCCCAGGGGGGCCGGAGTTCGAACGGCGGGAACCAAACGGCGTCGTCGAACGACAGCATGACGGTGACGGAGCAGCAGGTGGCAAAGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAGGGGAAGGGTCTGTGTTTGATGCCGATCTCGCTAGCGACGGCGATATCCACCTCCACGTGTCACTCCAGGAATCCGATGATGAACGGCGGCGGCCACGGCCACGGCCAGCACCCGGTGATGGGATCCAACGGCGAGGGGCCGTCGTCGCCGAGCATGTCGGTGCTGACGGTGCAATCCACGAGCATGGGGAACGGCTCCGTCAAAGACGCGGCCTCCGTGTCGAAGCCGTGA 1293 59.09 MQPCSREMQGLNSLLNHSQISLQDLHNDHHNHLNPAAAPPQIPPSHLHHFDPATSHDDFLEQMLNTIPSCSWPDMNPPNPKSPWDLNPINKPRELSDDALHLDHDSAALASKLRSHQISGNSAAAKAAVMLQQQLLLNRGMTAGNGVADHGLPPMPLSLGNGDLDRSQNDVVDGSCFRPPNSGGSMQSHSFGAPGNGMNQAPASGSVGVSPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQGGRSSNGGNQTASSNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPMMNGGGHGHGQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVSKP 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4333488 4336939 - MC06g0525 Mch6g0634 690081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0634 430 MobiDBLite consensus disorder prediction 27 53 - -
Mch6g0634 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 273 IPR011598 GO:0046983(InterPro)
Mch6g0634 430 MobiDBLite consensus disorder prediction 175 227 - -
Mch6g0634 430 Pfam Helix-loop-helix DNA-binding domain 229 274 IPR011598 GO:0046983(InterPro)
Mch6g0634 430 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 368 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Mch6g0634 430 MobiDBLite consensus disorder prediction 396 430 - -
Mch6g0634 430 MobiDBLite consensus disorder prediction 376 430 - -
Mch6g0634 430 SMART finulus 230 279 IPR011598 GO:0046983(InterPro)
Mch6g0634 430 MobiDBLite consensus disorder prediction 301 333 - -
Mch6g0634 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 222 284 IPR036638 GO:0046983(InterPro)
Mch6g0634 430 MobiDBLite consensus disorder prediction 311 333 - -
Mch6g0634 430 Gene3D - 219 281 IPR036638 GO:0046983(InterPro)
Mch6g0634 430 FunFam Transcription factor bHLH66 221 286 - -
Mch6g0634 430 MobiDBLite consensus disorder prediction 180 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1691 Mch-Chr4:20075627 Mch6g0634 Mch-Chr6:4333488 2.27E-14 dispersed
Mch6g0634 Mch-Chr6:4333488 Mch9g1063 Mch-Chr9:9814014 7.63E-18 dispersed
Mch6g1568 Mch-Chr6:16420103 Mch6g0634 Mch-Chr6:4333488 1.26E-55 transposed
Mch6g2866 Mch-Chr6:29812135 Mch6g0634 Mch-Chr6:4333488 1.05E-17 transposed
Mch8g2990 Mch-Chr8:32541002 Mch6g0634 Mch-Chr6:4333488 3.21E-121 transposed
Mch9g0913 Mch-Chr9:7244657 Mch6g0634 Mch-Chr6:4333488 3.45E-58 transposed
Mch6g0634 Mch-Chr6:4333488 Mch8g2741 Mch-Chr8:30611331 6.84E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43535 PF00010 HLH 1.60E-09 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0634 - - - 0.0