Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0634 | ATGCAGCCCTGTAGCAGAGAAATGCAAGGCTTGAACTCTCTGTTGAACCACTCCCAAATCTCCCTTCAGGATCTCCACAACGACCACCACAATCACTTGAACCCGGCGGCGGCGCCGCCACAGATCCCGCCGTCTCACCTTCACCATTTCGATCCTGCCACCTCCCACGACGATTTCCTCGAGCAAATGCTCAATACTATCCCCTCCTGTTCGTGGCCCGACATGAATCCTCCAAACCCTAAATCCCCCTGGGACCTAAACCCTATCAATAAGCCTAGAGAACTCTCCGACGACGCCCTCCACTTGGACCACGACTCCGCCGCCCTCGCCTCCAAGCTCCGGAGCCACCAGATCAGCGGCAACTCTGCGGCCGCTAAGGCAGCCGTCATGCTCCAGCAACAGCTTCTCTTGAACAGAGGGATGACCGCCGGAAATGGCGTCGCCGACCACGGCCTCCCTCCCATGCCTCTCTCGCTCGGGAATGGCGATTTGGATCGCTCTCAAAACGACGTCGTCGACGGATCCTGCTTCCGGCCACCGAACTCGGGAGGTTCTATGCAATCGCATAGTTTCGGAGCCCCGGGAAACGGGATGAACCAAGCTCCGGCGAGTGGTTCCGTCGGAGTTTCTCCATCGCAGCCGAAGCAGAAGGTCAGAGCTCGTAGAGGCCAAGCCACTGACCCCCACAGTATCGCCGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTCGTTCCCAATGCCAATAAGACAGACAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAGTTCCTCCAGCTTCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGGGGCGCGGCTGCTGTTGCTCCACTTGTTGCTGACGTCTCCTCTGAGGGGGGCGGTGAGTGTATGCAAGGAAGTGGGGCCCAGGGGGGCCGGAGTTCGAACGGCGGGAACCAAACGGCGTCGTCGAACGACAGCATGACGGTGACGGAGCAGCAGGTGGCAAAGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAGGGGAAGGGTCTGTGTTTGATGCCGATCTCGCTAGCGACGGCGATATCCACCTCCACGTGTCACTCCAGGAATCCGATGATGAACGGCGGCGGCCACGGCCACGGCCAGCACCCGGTGATGGGATCCAACGGCGAGGGGCCGTCGTCGCCGAGCATGTCGGTGCTGACGGTGCAATCCACGAGCATGGGGAACGGCTCCGTCAAAGACGCGGCCTCCGTGTCGAAGCCGTGA | 1293 | 59.09 | MQPCSREMQGLNSLLNHSQISLQDLHNDHHNHLNPAAAPPQIPPSHLHHFDPATSHDDFLEQMLNTIPSCSWPDMNPPNPKSPWDLNPINKPRELSDDALHLDHDSAALASKLRSHQISGNSAAAKAAVMLQQQLLLNRGMTAGNGVADHGLPPMPLSLGNGDLDRSQNDVVDGSCFRPPNSGGSMQSHSFGAPGNGMNQAPASGSVGVSPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQGGRSSNGGNQTASSNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPMMNGGGHGHGQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVSKP | 430 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4333488 | 4336939 | - | MC06g0525 | Mch6g0634 | 690081 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0634 | 430 | MobiDBLite | consensus disorder prediction | 27 | 53 | - | - | |
Mch6g0634 | 430 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 224 | 273 | IPR011598 | GO:0046983(InterPro) | |
Mch6g0634 | 430 | MobiDBLite | consensus disorder prediction | 175 | 227 | - | - | |
Mch6g0634 | 430 | Pfam | Helix-loop-helix DNA-binding domain | 229 | 274 | IPR011598 | GO:0046983(InterPro) | |
Mch6g0634 | 430 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 61 | 368 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Mch6g0634 | 430 | MobiDBLite | consensus disorder prediction | 396 | 430 | - | - | |
Mch6g0634 | 430 | MobiDBLite | consensus disorder prediction | 376 | 430 | - | - | |
Mch6g0634 | 430 | SMART | finulus | 230 | 279 | IPR011598 | GO:0046983(InterPro) | |
Mch6g0634 | 430 | MobiDBLite | consensus disorder prediction | 301 | 333 | - | - | |
Mch6g0634 | 430 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 222 | 284 | IPR036638 | GO:0046983(InterPro) | |
Mch6g0634 | 430 | MobiDBLite | consensus disorder prediction | 311 | 333 | - | - | |
Mch6g0634 | 430 | Gene3D | - | 219 | 281 | IPR036638 | GO:0046983(InterPro) | |
Mch6g0634 | 430 | FunFam | Transcription factor bHLH66 | 221 | 286 | - | - | |
Mch6g0634 | 430 | MobiDBLite | consensus disorder prediction | 180 | 219 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g1691 | Mch-Chr4:20075627 | Mch6g0634 | Mch-Chr6:4333488 | 2.27E-14 | dispersed | |
Mch6g0634 | Mch-Chr6:4333488 | Mch9g1063 | Mch-Chr9:9814014 | 7.63E-18 | dispersed | |
Mch6g1568 | Mch-Chr6:16420103 | Mch6g0634 | Mch-Chr6:4333488 | 1.26E-55 | transposed | |
Mch6g2866 | Mch-Chr6:29812135 | Mch6g0634 | Mch-Chr6:4333488 | 1.05E-17 | transposed | |
Mch8g2990 | Mch-Chr8:32541002 | Mch6g0634 | Mch-Chr6:4333488 | 3.21E-121 | transposed | |
Mch9g0913 | Mch-Chr9:7244657 | Mch6g0634 | Mch-Chr6:4333488 | 3.45E-58 | transposed | |
Mch6g0634 | Mch-Chr6:4333488 | Mch8g2741 | Mch-Chr8:30611331 | 6.84E-16 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43535 | PF00010 | HLH | 1.60E-09 | No_clan | Mch | TF |
Pathway information
