Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0639 ATGACCGTGGAGGGCCATTCCGTTGCTTCCGCCGGCGAAGATGGCGCCGCTGATCGTTTCCCAGTTGGGATGCGGGTTCTCGCCGTCGACGACGACCCTATTTGTCTCAAAGTACTTGAGAGTCTCCTCCGTAGATGCCGGTATCATGTTACTACGACGAAGCAGTCCATTGAGGCGCTGAGAATGTTGAGAGAAAACAGAAACAAATTTGACTTGGTTATTAGCGATGTGAACATGCCTGATATGGATGGTTTCAAGCTTCTTGAGTGTGTGGGGCTTGAAATGGACCTACCTGTGATTATGTTATCAGCGCATAGTGATACTGAGCTTGTTATGAAGGGGATTACACACGGTGCGTGTGACTATCTGTTGAAGCCGGTTCGAATTGAGGAGTTGAAGAACATTTGGCAGCATGTGATTCGGAGAAAGAAGCTTGAACCTAAGGCGAAAAACAAGTTCCCTAATCAGGATAAGGCTCGAAATGGAGGTGGTGAAGGTGAACAAGGTTTCTCATCAACCAGTAATGCGGAGAATGCAAAATTCAATAGGAAGCGGAAGGACCAAGACGAGGATGACGATGAAGAAGGAAAAGAGAACGGGCATGATAGTGACGACCCTTCAAACCAGAAGAAGCCTCGAGTAGTGTGGTCGGTTGAGTTGCACAGGAAGTTCGTTTCAGCAGTTAATCAGTTGGGACTTGAAAGTAAGATAATTCATGTTTTGCAGAAATATAGGCTCTATCTGAAAAGGATCAGCAATGTGGCATCTCAACAAGCCAACATGGTTGCAACATTTGGGAGTAAAGATGGCACTTACATGCGCATAGGTTCGCTTGATGGATATGCAGATTTACATGGCTTTGCAGGATCTGGGCGGCTTCCAAACTCGACATTATCGTCATACTCACCTGCTGGAATACTTGGAAGATTGAACTCCCCGGCTGGAATGAGCCTGCGTGGGATTGCTTCTTCTGGACTGATCCAGCAAAGTTCCCAAAATTTGAACTGCGCTATTAATACCCTTGGGAAGATCCAGCCAAGTACTATGTTGCCTCCTAGCCAAACTACTAGCCTGATGCAAGGAACTCCGATGTCGCTCGAGCTCAGCCAGTTGGAACACAGCAAGTCCAGCGCCCCGATTGGGGAATTCAATACAATGAATGAGACATCTGGGTTTGGAGTTCCCAACAGCTTCTCTGACACTAGGGTGAATATCGGAAATTCAACCAATTCGGTTTCCCGCTCTCCATTGATGTTACAAGGAACCATGGCAGCATATGGAAATCAGACTTCCCTTAGAGTGGATCCATCAAATGGAGAAACTTTTGACATAGAAACCAGCGGTTCAAATTTTTTGGATCCTGATCTTCCTAATGAAAACTGGCAGGGAGCAGCTCAATTGTCTAGATTCTCAGCAACTTCTTTGACCCCTAATGAAGCTTATAACAATGATCAATTGCACGCAATAAACTCGACCATTTCTTCCACTCCCTCAACGATTGGAAGCATCCCCGTTGATTTTTCCACCAGAAGTGCAGTTTCAGCTCCCTTGCAGGACTCAAGAAATATGCAATGCCAGGCAGGTCTTGGCAGTGTTATTCAAGCTATGAATAGCATGCCAAAGCAGAGTTGGGAAGAGCATAGATACGATTACAGTCAAAACGTGCAGCATAATCTTAGCGCAATCAATTCTATGGTTCCTAGCAATGGGACTCTAATGAGCCAGAGTTTGAATCAGAATAATATAGGATGTGATAGAAAGGTCAGTTCATCTTTGATTGTCCCACCAAATGCTGCTGCTCTACATAGCGTGCTTGAAAAATTGGGTCCTAACGCAAGGGTGGATGCGGATGGAAACTACGTTTTGAATCAAACAAAGTCACACGGAGCGTCAATTCAAGGCAGTTTCGAGTCCTTGGACGATATAATGAATGCGATGATCAAACGGGTA 1950 45.54 MTVEGHSVASAGEDGAADRFPVGMRVLAVDDDPICLKVLESLLRRCRYHVTTTKQSIEALRMLRENRNKFDLVISDVNMPDMDGFKLLECVGLEMDLPVIMLSAHSDTELVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPNQDKARNGGGEGEQGFSSTSNAENAKFNRKRKDQDEDDDEEGKENGHDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLESKIIHVLQKYRLYLKRISNVASQQANMVATFGSKDGTYMRIGSLDGYADLHGFAGSGRLPNSTLSSYSPAGILGRLNSPAGMSLRGIASSGLIQQSSQNLNCAINTLGKIQPSTMLPPSQTTSLMQGTPMSLELSQLEHSKSSAPIGEFNTMNETSGFGVPNSFSDTRVNIGNSTNSVSRSPLMLQGTMAAYGNQTSLRVDPSNGETFDIETSGSNFLDPDLPNENWQGAAQLSRFSATSLTPNEAYNNDQLHAINSTISSTPSTIGSIPVDFSTRSAVSAPLQDSRNMQCQAGLGSVIQAMNSMPKQSWEEHRYDYSQNVQHNLSAINSMVPSNGTLMSQSLNQNNIGCDRKVSSSLIVPPNAAALHSVLEKLGPNARVDADGNYVLNQTKSHGASIQGSFESLDDIMNAMIKRV 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4371040 4374234 - MC06g0530 Mch6g0639 690086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0639 650 PIRSF RR_ARR_type-B 3 240 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Mch6g0639 650 PIRSF RR_ARR_type-B 239 629 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Mch6g0639 650 CDD REC_typeB_ARR-like 26 140 - -
Mch6g0639 650 Gene3D - 24 192 - -
Mch6g0639 650 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 252 IPR045279 GO:0009736(InterPro)
Mch6g0639 650 Gene3D - 207 239 - -
Mch6g0639 650 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160(InterPro)
Mch6g0639 650 SMART REC_2 24 136 IPR001789 GO:0000160(InterPro)
Mch6g0639 650 SUPERFAMILY CheY-like 23 148 IPR011006 -
Mch6g0639 650 MobiDBLite consensus disorder prediction 147 211 - -
Mch6g0639 650 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0639 Mch-Chr6:4371040 Mch7g1214 Mch-Chr7:15730654 1.07E-69 dispersed
Mch11g0515 Mch-Chr11:3306819 Mch6g0639 Mch-Chr6:4371040 1.53E-125 wgd
Mch6g0639 Mch-Chr6:4371040 Mch8g3032 Mch-Chr8:32922850 3.03E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43536 PF00072 Response_reg 1.80E-24 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0639 K14491 - csv:101213687 1014.22