Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0749 TTCCGCTACAAAGAGCTCGAGGAAGCCACCGATTATTTTAGGGCTTTGATAGGGCGGGGATCGTCCGGTTCAGTCTTCAGAGGAGTCCTCAAAGACGGCACTGCCGTCGCCGTGAAGCGGATCGAGGGAGAGAATCAAGGAGAGAAAGAGTTCCGAGCGGAGGTCGCCGCCATTGCGAGCGTTCAGCACATAAATCTCGTTCGTCTAATTGGCTACTGTACCAATTCATCCGGACCACGATTTCTCGTCTACGAATTCGTTCCGAACGGATCCTTGGATTGCTGGATTTTCCCCAAGAAATCGGAATACAAGAATCGGAATCGCCCCGGCGGTTGCTTGGCTTGGGATCTGAGATACAGAGTCGCCATTGATGTCGCCAAAGCCCTAGCCTACCTTCACCACGATTGCCGGTCAAGAATCTTGCACCTCGATGTCAAGCCCGAAAACATCCTTCTCGACGAAAATTACCGAGCGATTGTTTCCGATTTCGGACTCTCGAAGCTA 504 51.98 FRYKELEEATDYFRALIGRGSSGSVFRGVLKDGTAVAVKRIEGENQGEKEFRAEVAAIASVQHINLVRLIGYCTNSSGPRFLVYEFVPNGSLDCWIFPKKSEYKNRNRPGGCLAWDLRYRVAIDVAKALAYLHHDCRSRILHLDVKPENILLDENYRAIVSDFGLSKL 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5130764 5131267 - MC06g0627 Mch6g0749 690196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0749 168 PANTHER OS07G0415500 PROTEIN 1 168 - -
Mch6g0749 168 ProSitePatterns Protein kinases ATP-binding region signature. 17 39 IPR017441 GO:0005524(InterPro)
Mch6g0749 168 SMART serkin_6 11 168 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0749 168 Gene3D Transferase(Phosphotransferase) domain 1 87 168 - -
Mch6g0749 168 SUPERFAMILY Protein kinase-like (PK-like) 2 167 IPR011009 -
Mch6g0749 168 Pfam Protein kinase domain 16 167 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0749 168 FunFam serine/threonine-protein kinase PBS1-like 1 86 - -
Mch6g0749 168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0749 168 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Mch6g0749 168 ProSiteProfiles Protein kinase domain profile. 11 168 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0749 Mch-Chr6:5130764 Mch8g0461 Mch-Chr8:3274081 1.31E-60 dispersed
Mch5g0607 Mch-Chr5:4039125 Mch6g0749 Mch-Chr6:5130764 1.49E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77478 PF00069 Pkinase 9.40E-27 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0749 - - - 0.0