Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g0758 | ATGGACGGCGTGAGAAGCTCCGGTGGTTTCATGGTTCCTTCTGTGTGTGGTCAGCAAGAGCTGGAGCAGCTGTCCAGAGATGGCAGTCAGTACAGCCTCACCACTGGAATATTGCCCTCCCTCGGCGCTAGGAGTAATCGGAGAGTCAAACTCCGCCGCTTCATCGTTTCGCCCTACGACCGCCGATACAGGGTTTGGGAGACTTTTCTGGTTGTTTTGGTGGTATATACTGCCTGGGTCTCGCCGTTCGAATTTGGATTCCTCAAGAAACCCGAATCGCCACTCTCTGTTACAGACAATGTGGTTAATGGATTTTTTGCTGTGGATATTGTTCTCACATTCTTTGTAGCTTACCTTGACAAAACCTCCTATTTACTTGTTGATGAGCCAAAGAAGATTGCTATAAAGTATGCACGTTCGTGGCTAATCTTAGATGTCATCTCCACAATTCCTTCTGAACTTGCACATAAGATTTCCCCTCCTCCTCTCCGTTCCTATGGATTATTCAACATGCTTCGTCTATGGCGTCTCAGAAGAGTCAGTGCTCTTTTTTCCAGACTTGAAAAGGACAAGAACTATAACTACTTCTGGGTTCGATGTGCAAAACTCGTTTGTGTTACTCTATTTGCTGTTCACTGTGCCGCATGCTTCTATTATCTCCTTGCTGCTCGTTATCGTGATCCAAAAAGGACGTGGATTGGAGCATCCATGGGGAACTTTCTTGAGCAAAGTCTGTGGATTAGATATGTCACCTCCATTTATTGGTCAATCACTACCCTAACCACTGTCGGCTATGGTGACCTGCATCCTGTGAATACGAGGGAAATGATTTTTGACATCTTCTACATGCTTTTCAATCTTGGTTTGACAGCATACTTGATTGGAAATATGACCAACTTAGTTGTCCATGGGACCAGTAGAACTAGAAAATTTAGAGATACCATACAAGCGGCCTCTAGTTTCGCCAATAGGAATCAACTTCCTCTTCGTTTGCAAGACCAAATGCTGGCACATTTGTGTCTAAAGTTCAGAACAGATTCTGAGGGATTGCAGCAGCAAGAAACTCTTGATTCCTTGCCTAAAGCCATCCGATCAAGCATTTCACATTATCTTTTCTACTCTCTAGTAGACAAGGTCTATTTGTTTCGTGGTGTTTCAAATGACCTACTTTTTCAACTGGTTAGTAACATAAAAATGAAGGCCGAGTATTTTCCTCCAAAAGAAGATGTGATTTTACAAAATGAAGCCCCAACAGACTTCTACATTCTTGTCACGGGTGCTGTGGATTTGCTGGTTCTGAAAAATGGAGTTGAACAGGCAAGAGAGGCTAAAACTGGCGATCTTTGTGGTGAGATTGGGGTATTATGTTACAGACCACAACTATTTACTGTGCGTACTAAGCGATTGAGTCAGTTGCTGCGTCTGAATCGTACTGCATTCCTTAGTCTCGTTCAATCTAATGTTGGCGATGGGACTATTATCATGAACAACCTTCTTCAGCATTTGAAAGACCTCAAAGACAAAGACCCCATCATGGAAGGAGTTTTGTTGGAGACAGAGAACATGCTAGCTAGAGGCAGAATGGACCTACCACTCAGTCTTTGTTTTGCAGCACTTAGAGGAGATGACTTGCTTTTACACCAGCTCTTGAAACGAGGTCTTGATCCAAATGAATCCGACAACAATGGGAGGACTTCACTTCATATAGCAGCCTCAAAAGGAAACGAGAACTGTGTGCTTCTACTACTCGATTACGGAGCAGATCCCAATAGTAGAGATTCGGACGGGAATGTGCCATTATGGGAGGCGATACTAGGTGGCCATGAGCCGGTGGCTCAGCTACTTATAGACAATGGCGCTAATCTGCGGTCGGGTGAGGTGGGTCAATTTGCGTGTACTGCTGCAGAGCAAAACAACCTCCAGTTGCTCAAAGATATTCTCCGATACGGAGGCGACATTACAAGTGCCAAGAACAATGGAACGACAGCTTTACACGTTTCAGTTTGTGAAGACAACGTTGAGATTGCCAAGTTCCTCCTTGAACAAGGAGCTGATATTGACAAACCAGACGTCCATGGATGGACTCCAAGAGATCTAGCAGACCAACAGGGACATGAAGAAATCAAAAACCTGTTCCAGACAACAAAAGAGTCAAGAACTCATTTAGTGGTCGCCATTCCCGAGAAGCAGGGTGGGAGTCGCTTCCTCGGAAGGTTTAAAAGCGAGCCCATGATCCGCCCTGTACCCCAGGAAGGCAACGATGGTGCATGGCCCGGTCAATCTCGTCCACGGCGTAGGACTAACAACTTCAATAACTCATTGTTTGGTATCATGTCAGCAGCACACTCAGGCGAGAGAGACATCCTTTTCTCTGATAACCAAACCAGAGGAGAAATGTCTGGAACCAATCCTGCTAGGGTTATAATCAGCTGTCCAGAGATCGGTGAAGTCGCTGGGAAGTTGGTGCGTCTTCCAGGAAGCTACGACGAGCTTCTTGAGATGGGTGCCAAGAAATATGGGATTATGGTTTCAAAGGTTTTGAACAAAGATGGAGCTGCAATTGAAGATATAGAGGTCATTAGGGATGGTGATCATATTGTTTTTGTCAGCGATGAAAGAACCACACAGCCATAA | 2634 | 45.03 | MDGVRSSGGFMVPSVCGQQELEQLSRDGSQYSLTTGILPSLGARSNRRVKLRRFIVSPYDRRYRVWETFLVVLVVYTAWVSPFEFGFLKKPESPLSVTDNVVNGFFAVDIVLTFFVAYLDKTSYLLVDEPKKIAIKYARSWLILDVISTIPSELAHKISPPPLRSYGLFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLVCVTLFAVHCAACFYYLLAARYRDPKRTWIGASMGNFLEQSLWIRYVTSIYWSITTLTTVGYGDLHPVNTREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFANRNQLPLRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSNIKMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQAREAKTGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTAFLSLVQSNVGDGTIIMNNLLQHLKDLKDKDPIMEGVLLETENMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTSLHIAASKGNENCVLLLLDYGADPNSRDSDGNVPLWEAILGGHEPVAQLLIDNGANLRSGEVGQFACTAAEQNNLQLLKDILRYGGDITSAKNNGTTALHVSVCEDNVEIAKFLLEQGADIDKPDVHGWTPRDLADQQGHEEIKNLFQTTKESRTHLVVAIPEKQGGSRFLGRFKSEPMIRPVPQEGNDGAWPGQSRPRRRTNNFNNSLFGIMSAAHSGERDILFSDNQTRGEMSGTNPARVIISCPEIGEVAGKLVRLPGSYDELLEMGAKKYGIMVSKVLNKDGAAIEDIEVIRDGDHIVFVSDERTTQP | 877 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5208408 | 5214311 | + | MC06g0635 | Mch6g0758 | 690205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g0758 | 877 | PRINTS | Ankyrin repeat signature | 563 | 578 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | PRINTS | Ankyrin repeat signature | 675 | 689 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | CDD | CAP_ED | 381 | 487 | IPR000595 | - | |
| Mch6g0758 | 877 | SUPERFAMILY | Ankyrin repeat | 533 | 712 | IPR036770 | - | |
| Mch6g0758 | 877 | Gene3D | - | 530 | 714 | IPR036770 | - | |
| Mch6g0758 | 877 | SMART | cnmp_10 | 381 | 499 | IPR000595 | - | |
| Mch6g0758 | 877 | FunFam | Potassium channel SKOR | 64 | 302 | - | - | |
| Mch6g0758 | 877 | Gene3D | - | 64 | 302 | - | - | |
| Mch6g0758 | 877 | PRINTS | EAG/ELK/ERG potassium channel family signature | 249 | 266 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Mch6g0758 | 877 | PRINTS | EAG/ELK/ERG potassium channel family signature | 275 | 286 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Mch6g0758 | 877 | PRINTS | EAG/ELK/ERG potassium channel family signature | 110 | 119 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Mch6g0758 | 877 | PRINTS | EAG/ELK/ERG potassium channel family signature | 76 | 83 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Mch6g0758 | 877 | PRINTS | EAG/ELK/ERG potassium channel family signature | 99 | 109 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Mch6g0758 | 877 | PRINTS | EAG/ELK/ERG potassium channel family signature | 293 | 302 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Mch6g0758 | 877 | ProSiteProfiles | Ankyrin repeat profile. | 562 | 594 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | ProSiteProfiles | Ankyrin repeat region circular profile. | 659 | 690 | - | - | |
| Mch6g0758 | 877 | SMART | ANK_2a | 529 | 558 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | SMART | ANK_2a | 595 | 624 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | SMART | ANK_2a | 562 | 591 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | SMART | ANK_2a | 659 | 688 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | SUPERFAMILY | Voltage-gated potassium channels | 58 | 302 | - | - | |
| Mch6g0758 | 877 | Gene3D | Jelly Rolls | 345 | 508 | IPR014710 | - | |
| Mch6g0758 | 877 | ProSiteProfiles | Ankyrin repeat profile. | 595 | 627 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | SUPERFAMILY | cAMP-binding domain-like | 306 | 502 | IPR018490 | - | |
| Mch6g0758 | 877 | FunFam | Potassium channel KAT2 | 369 | 506 | - | - | |
| Mch6g0758 | 877 | Pfam | KHA, dimerisation domain of potassium ion channel | 806 | 868 | IPR021789 | - | |
| Mch6g0758 | 877 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 381 | 484 | IPR000595 | - | |
| Mch6g0758 | 877 | Pfam | Ankyrin repeats (3 copies) | 633 | 708 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | Pfam | Ankyrin repeats (3 copies) | 534 | 622 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | ProSiteProfiles | Ankyrin repeat region circular profile. | 595 | 622 | - | - | |
| Mch6g0758 | 877 | ProSiteProfiles | Ankyrin repeat region circular profile. | 562 | 593 | - | - | |
| Mch6g0758 | 877 | ProSiteProfiles | Ankyrin repeat profile. | 659 | 691 | IPR002110 | GO:0005515(InterPro) | |
| Mch6g0758 | 877 | ProSiteProfiles | KHA domain profile. | 806 | 877 | IPR021789 | - | |
| Mch6g0758 | 877 | Pfam | Ion transport protein | 63 | 308 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch6g0758 | 877 | MobiDBLite | consensus disorder prediction | 744 | 765 | - | - | |
| Mch6g0758 | 877 | PANTHER | POTASSIUM CHANNEL AKT1 | 23 | 867 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Mch6g0758 | 877 | Pfam | Cyclic nucleotide-binding domain | 402 | 487 | IPR000595 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0576 | Mch-Chr11:3675599 | Mch6g0758 | Mch-Chr6:5208408 | 0 | dispersed | |
| Mch3g1015 | Mch-Chr3:13843360 | Mch6g0758 | Mch-Chr6:5208408 | 7.12E-205 | dispersed | |
| Mch4g1704 | Mch-Chr4:20195295 | Mch6g0758 | Mch-Chr6:5208408 | 1.18E-96 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch6g0758 | K21867 | - | csv:101220784 | 1575.07 |