Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0759 | ATGAAAGGGGAAGTACAATTGGATTCGTCAATTGGCCAAAACCCTAGTGACTCTGATCCTCTGCTCGAGAATCAGGCCGATTCATCATCCCATGGAACCTCCGATGAAATCAAGAATGAGGATACTGAAGCTGGTTCCATTCCGTGTTGTCGTATTTGCCTAGAGAGCGATGCAGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGAAGGGTTTGCTTTCTCACATTGCACAACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTGTTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCTGCAATGAGTGGTTATGCATACATTATGGACAAAGACGGGACATTCAGAAATTCTTTCAGTGATGGATGGGATCGCATTCTGTCGAAACATCCTATTCCATTTTATTATTGTATCGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATCCTGCATTGTTCCTCCCTAAATAGTAACGATCCTCGAGTTGCTGGGTGTCACAACTGTTGCTATGGTTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCGTGCTTCGCACTTGTTATCGTTTTTGTTGTTATCTTTGTCATCCTTGGGATAGCTTACGGTTTCCTTGCTGCCACTATGGCTATTCAAAGGATCTGGCAGAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAGTACGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAACACTTGAAAATGCTACAACTTCTGTAA | 912 | 43.75 | MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMSGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5212903 | 5217564 | - | MC06g0636 | Mch6g0759 | 690206 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0759 | 303 | MobiDBLite | consensus disorder prediction | 7 | 32 | - | - | |
Mch6g0759 | 303 | CDD | RING_CH-C4HC3_MARCH | 50 | 99 | - | - | |
Mch6g0759 | 303 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 11 | 302 | - | - | |
Mch6g0759 | 303 | SMART | ringv_2 | 49 | 99 | IPR011016 | GO:0008270(InterPro) | |
Mch6g0759 | 303 | Pfam | RING-variant domain | 50 | 98 | IPR011016 | GO:0008270(InterPro) | |
Mch6g0759 | 303 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 33 | 112 | IPR013083 | - | |
Mch6g0759 | 303 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 42 | 105 | IPR011016 | GO:0008270(InterPro) | |
Mch6g0759 | 303 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Mch6g0759 | 303 | SUPERFAMILY | RING/U-box | 48 | 103 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g1451 | Mch-Chr1:16168737 | Mch6g0759 | Mch-Chr6:5212903 | 3.79E-61 | dispersed | |
Mch6g0759 | Mch-Chr6:5212903 | Mch8g1314 | Mch-Chr8:9556476 | 1.43E-42 | dispersed |
Pathway information
