Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0759 ATGAAAGGGGAAGTACAATTGGATTCGTCAATTGGCCAAAACCCTAGTGACTCTGATCCTCTGCTCGAGAATCAGGCCGATTCATCATCCCATGGAACCTCCGATGAAATCAAGAATGAGGATACTGAAGCTGGTTCCATTCCGTGTTGTCGTATTTGCCTAGAGAGCGATGCAGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGAAGGGTTTGCTTTCTCACATTGCACAACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTGTTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCTGCAATGAGTGGTTATGCATACATTATGGACAAAGACGGGACATTCAGAAATTCTTTCAGTGATGGATGGGATCGCATTCTGTCGAAACATCCTATTCCATTTTATTATTGTATCGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATCCTGCATTGTTCCTCCCTAAATAGTAACGATCCTCGAGTTGCTGGGTGTCACAACTGTTGCTATGGTTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCGTGCTTCGCACTTGTTATCGTTTTTGTTGTTATCTTTGTCATCCTTGGGATAGCTTACGGTTTCCTTGCTGCCACTATGGCTATTCAAAGGATCTGGCAGAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAGTACGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAACACTTGAAAATGCTACAACTTCTGTAA 912 43.75 MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMSGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5212903 5217564 - MC06g0636 Mch6g0759 690206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0759 303 MobiDBLite consensus disorder prediction 7 32 - -
Mch6g0759 303 CDD RING_CH-C4HC3_MARCH 50 99 - -
Mch6g0759 303 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 11 302 - -
Mch6g0759 303 SMART ringv_2 49 99 IPR011016 GO:0008270(InterPro)
Mch6g0759 303 Pfam RING-variant domain 50 98 IPR011016 GO:0008270(InterPro)
Mch6g0759 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 112 IPR013083 -
Mch6g0759 303 ProSiteProfiles Zinc finger RING-CH-type profile. 42 105 IPR011016 GO:0008270(InterPro)
Mch6g0759 303 MobiDBLite consensus disorder prediction 1 41 - -
Mch6g0759 303 SUPERFAMILY RING/U-box 48 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1451 Mch-Chr1:16168737 Mch6g0759 Mch-Chr6:5212903 3.79E-61 dispersed
Mch6g0759 Mch-Chr6:5212903 Mch8g1314 Mch-Chr8:9556476 1.43E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0759 - - - 0.0