Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0767 ATGCCCTACATGCAAATGGAGCCTGAAGAGAAACATGTAATACCATCTTCTCAAATGGTGTTGAAATCCCTACATGGATTAAAGGATGCTGAAAAGACTAGTTTATGGAGAAGAAAAGGAAAGAGGAGAGCAAAAGGATCTGCCATGGAAGGACTCAAGCAAGAGGAGCTTGATCCAAATCTGGAGTTTCCCTCTTCCACATCTTCCAGCAAAAGCTTAATGTTTCCCAGCAGGCCAGGCTTTGGCCAGCTGGGGACTAAATGCTTGGTTAAAGCCAATCACTTCCTGGCAAAAATACCTGAATCAGACATAAGTCACTACACTGTTATGATAACCCCAGAAGTTACTTCTCGAAAAATGAAGAAGAATATATTGACTGAGTTGGTCAAACATTATAGAAGCACAGAACTGGGGATGAGACTGCCAGTGTATGATGGAGGAAGAAACCTGTACACAGCCGGATTGCTGCCTTTCACATCAAAAGAGTTCACTGTCATTTTGGCTCATGAGGAAGAGGGGACAACCAATCCCAGGCAAATTTTCTTCTTTTCTTCACATATTTTTGCTTTTTCTTTGTGGGAAAACTTTGACTCAATCTGGGGTAATCGTATCAGGGAACGAGAATTTAAAGTGCAGATAAAGTTCGTAAGTTTGGCTAGTATGCACCAGTTACGAGAATTACTTGCTGGCAAACAAGTTAATAACCCTCAAGATGCTTTGGCCATTATTGACATAGTCTTGAGGGAGCTTCATGCTCAAAGATATATATCAGTTGGGCGATTCTTTTACTCTCCCTGCATTAAGAAACCTCAGCATGTTGGGGGTGGTTTGCAAGCATGGCGTGGTTTCTATCAAAGCATCCGACCTACTCAAATGGGATTGTCACTAAATATTGACATGTCATCCACTGCATTCTTTGAAGCAATCCCTGTCATTGATTTTGTTGCTCAAATTCTGAAGAAAGATGTGTATACTAGACCATTGTCCGATGCTGATCGTATCAAGGTTAAAAAAGTACTAAGGGGTGTAAAAGTTGAAGTTACACACCGAGGAAATGTAAGAAGGAAATATCGAATTTCAGGACTGACATCACAGCCTACAAGAGAGCTAATTTTCCCTCTTGATGAGCAGATGAACATGAAATCTGTAGTTGAGTACTTCCAAGAGAAGTATGGATATACCATTCAGTATACACATTTGCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGTGAATTATCTACCCATGGAGGCATGTAAGATACTTAAAGGACAGAGATACACCAAAGGACTAAACGAAAAGCAAATAACTTCCTTGTTGAAAGTTTCTTGTCAAAGACCCTCAGATCAAGAAATAGACATTTTACAGACTGTTAATCAGAATGCATATGAGGAAGATCCGTATGCAAAAGAGTTCGGAATCAGCATTGACAACAAGCTTACATCAGTTGAAGCACGAGTTCTTCCATCTCCATGGCTAAAATTTAACGACGCGGGAAAAGAAAAGGAACATCTTCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTAATAAACGGAAGTGTTGTAAGATACTGGGCTTGTATCAATTTCTCGCGCAACGTCCAAGAGAGCATTGCTCGTGGTTTCTGTCAACAGCTGGTCCAGATGTGCCAAATTTCTGGCATGGAATTTAACCCAGATCCTGCGGTTCCTATATACTCAGCAAGACCAGATCAAGTGAAGAAGGCCTTAAAATTTGTATATAGTTCAGTTTATAACAAACATGAAGGGAAAGAGTTAGAGTTACTTATAGCTATTCTTCCCGACAGCAATGGCTCTTTATATGGTGATCTTAAAAGGATCTGCGAAACAGAGTTGGGATTGATCTCCCAGTGTTGTCTAACAAAGCATGTCTTCAAGAAGAGCAGACAGTATTTAGCAAATGTGTCACTTAAGATCAACGTCAAGATGGGGGGAAGAAACACTGTTCTTTTAGATGCTTTGCGGTCAAGAATTCCACTAGTCAGTGACATACCAACAATAATCTTTGGAGCTGACGTTACCCATCCAGAATCAGGGGAGGATTCTCTTCCATCAATAGCTGCCGTTGTGGCCTCCCAAGATTGGCCAGAAGTTACAAAATATGCCGGATTAGTATGTGCTCAACCTCACCGAGAAGAACTGATTCAAGATTTGTTCAAAACGTGGAAAGATCCTCACCGGGGCATGGTTGCCGGTGGCATGATAAGGGAGCTCTTGCTTTCATTTAAGAAGGCCACAGGACAAAAACCATTGAGGATAATATTCTACAGGGATGGTGTCAGTGAGGGTCAGTTCTACCAGGTTTTACTGCATGAACTTGATGCGGTACGCAAGGCTTGTGCTTCACTAGAACCCAGTTACCAACCTCCAGTAACTTTTATCGTTGTCCAAAAGCGACATCATACCAGACTTTTTGCATCCAATCACAATGATAGAAGCAGCACTGACAAGAGCGGTAATATTTTACCAGGTACTGTCGTGGATTCAAAGATATGTCATCCGACCGAGTTCGACTTTTATCTATGCAGTCATGCAGGGATCCAGGGAACGAGTCGTCCTGCACATTATCATGTTCTTTGGGATGAAAACAACTTCAGTGCAGATGATATTCAATCTCTGACTAATAACCTCTGCTACACGTATGCTCGGTGCACAAGATCAGTGTCAGTAGTTCCTCCAGCATACTACGCTCATTTAGCAGCGTACAGAGCTCGATTCTATGTGGAACCCGACGCCCAGGAGAACGCCAAAAGGTGCTGCACTCGCACCACAAATGGGACCTGCGTCCGGCCTCTGCCTGCACTGAAAGAGAGAGTGAAAAATGTGATGTTCTATTGTTGA 2868 42.19 MPYMQMEPEEKHVIPSSQMVLKSLHGLKDAEKTSLWRRKGKRRAKGSAMEGLKQEELDPNLEFPSSTSSSKSLMFPSRPGFGQLGTKCLVKANHFLAKIPESDISHYTVMITPEVTSRKMKKNILTELVKHYRSTELGMRLPVYDGGRNLYTAGLLPFTSKEFTVILAHEEEGTTNPRQIFFFSSHIFAFSLWENFDSIWGNRIREREFKVQIKFVSLASMHQLRELLAGKQVNNPQDALAIIDIVLRELHAQRYISVGRFFYSPCIKKPQHVGGGLQAWRGFYQSIRPTQMGLSLNIDMSSTAFFEAIPVIDFVAQILKKDVYTRPLSDADRIKVKKVLRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVEYFQEKYGYTIQYTHLPCLQVGNQKKVNYLPMEACKILKGQRYTKGLNEKQITSLLKVSCQRPSDQEIDILQTVNQNAYEEDPYAKEFGISIDNKLTSVEARVLPSPWLKFNDAGKEKEHLPQVGQWNMMNKKVINGSVVRYWACINFSRNVQESIARGFCQQLVQMCQISGMEFNPDPAVPIYSARPDQVKKALKFVYSSVYNKHEGKELELLIAILPDSNGSLYGDLKRICETELGLISQCCLTKHVFKKSRQYLANVSLKINVKMGGRNTVLLDALRSRIPLVSDIPTIIFGADVTHPESGEDSLPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPHRGMVAGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLHELDAVRKACASLEPSYQPPVTFIVVQKRHHTRLFASNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADDIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYVEPDAQENAKRCCTRTTNGTCVRPLPALKERVKNVMFYC 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5291292 5301700 - MC06g0643 Mch6g0767 690214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0767 955 Gene3D - 487 660 - -
Mch6g0767 955 ProSiteProfiles Piwi domain profile. 597 918 IPR003165 GO:0003676(InterPro)
Mch6g0767 955 FunFam Protein argonaute-2 302 428 - -
Mch6g0767 955 CDD PAZ_argonaute_like 308 422 - -
Mch6g0767 955 SUPERFAMILY Ribonuclease H-like 586 919 IPR012337 -
Mch6g0767 955 SMART DUF1785_2 256 308 IPR014811 -
Mch6g0767 955 CDD Piwi_ago-like 467 916 IPR045246 -
Mch6g0767 955 Gene3D paz domain 302 427 - -
Mch6g0767 955 MobiDBLite consensus disorder prediction 35 74 - -
Mch6g0767 955 Pfam Mid domain of argonaute 506 583 IPR032473 -
Mch6g0767 955 Pfam Argonaute linker 2 domain 453 495 IPR032472 -
Mch6g0767 955 Pfam Piwi domain 598 916 IPR003165 GO:0003676(InterPro)
Mch6g0767 955 Pfam Argonaute linker 1 domain 257 307 IPR014811 -
Mch6g0767 955 FunFam Argonaute 10 487 660 - -
Mch6g0767 955 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 78 924 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Mch6g0767 955 SMART PAZ_2_a_3 313 445 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch6g0767 955 ProSiteProfiles PAZ domain profile. 310 423 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch6g0767 955 SMART Piwi_a_2 597 918 IPR003165 GO:0003676(InterPro)
Mch6g0767 955 SUPERFAMILY PAZ domain 303 463 IPR036085 GO:0005515(InterPro)
Mch6g0767 955 Gene3D - 666 955 IPR036397 GO:0003676(InterPro)
Mch6g0767 955 Pfam N-terminal domain of argonaute 87 247 IPR032474 -
Mch6g0767 955 Pfam PAZ domain 313 439 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch6g0767 955 FunFam protein argonaute 10-like 666 955 - -
Mch6g0767 955 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0092 Mch-Chr4:608995 Mch6g0767 Mch-Chr6:5291292 1.17E-155 dispersed
Mch5g0550 Mch-Chr5:3690938 Mch6g0767 Mch-Chr6:5291292 0 dispersed
Mch6g0767 Mch-Chr6:5291292 Mch9g2100 Mch-Chr9:21950707 3.43E-190 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0767 K11593 - csv:101213206 1726.84