Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0772 CTCCGTGTTCTGAGTCTCCGTTCTAACCGAATCTCCGGCGGATTGCCGCCGGATTTCGCCAATTTGACATTTCTTCGCAGTCTTTATCTCCAGGACAACGAGCTCTCCGGCGACTTCCCGGTCAGCGTGACTCAGTTGACTCGGTTGACTCGACTCGACCTCTCGTCCAACAACTTCTCTGGTTCGATTCCGTTTTCGGTCAATAACCTGACCCATTTGAGTGGACTGTTTCTGGAGAATAATGGATTTTCGGGTTCGCTGCCGAGCATTCCTGCACTTAATTTAACGGGCTTCAATGTCTCGAATAACAAGCTTAATGGATCCATTCCTGAAACCCTATCGAAATTCTCTGCTGCATCATTCGCCGGAAATTTACAACTCTGCGGCGGTCCATTGCCGTCGTGCAACCCGTTCTTCCCCTCCCCAGCTCCGTCACCGACGTCCTCCGTGAAACCACCACTAATTCCCGTCGAGAAGAAGTCCAAGAAGCTCTCCACCGCCGCCATTATCGGAATTGTCGTCGCCTCTGCTGTAGTCGCATTTATATTGTTGTTCCTCCTCATATTCTGCCTCCGAAAGCGCGAGCGTAGACAGCCGGCGAAGCCGCCGAATCCGGTGGTTGCCGCTCGATCCGTGCCTGTTGAAGCCGGCACCTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTTCTGGGCAAAGGAAGCGTCGGAACGTCGTACAAGGCGGTGCTGGAGGAAGGAACCACCGTCGTAGTGAAGAGATTGAAAGACGTTGTGCTGGCGAAGAAGGAATTCGAAACGCAAATGGAAGCTCTGGGAATTGTGAAACACGAGAATGTGGTTCCTCTCAGAGCATTCTACTATTCCAGAGACGAGAAATTGCTCGTCTCCGATTACATGTCCGCCGGCAGCCTTTCCGCTTCACTTCACGGCCGTACGCCACTTGACTGGGACAACCGGATGAAAATCGCATTAAGCGCGGCAAGAGGCCTGGCTCACCTCCACGTGTCGGGAAAACTCGTCCATGGCAATATCAAATCATCCAACGTCCTCCTCCGCCCCAACAACGACGCCGCCGTCTCCGACTTCGGCCTGAACCCGCTCTTCGGCACCACTACGCCGCCCAACCGGATCGCCGGCTACCGCGCTCCGGAGGTGGTGGAAACCCGAAAGGTCACGTTCAAGTCCGACGTGTACAGTTTTGGCGTGTTGCTTTTGGAGCTATTGACCGGGAAATCGCCAAATCAAGCGTCGTTGGGGGAGGAAGGGATCGATCTTCCACGGTGGGTCCAGTCGGTGGTCCGGGAGGAATGGACGGCGGAGGTTTTTGACGTGGAATTGATGAGGTACCACAATATTGAAGAGGAGATGGTTCAGTTGTTACAAATCGCGATGGCCTGTGTCGCCACCGTACCGGACCAGCGGCCGTCGATGCAGGAGGTGGTCCGGATGATTGAGGATTTG 1467 54.6 LRVLSLRSNRISGGLPPDFANLTFLRSLYLQDNELSGDFPVSVTQLTRLTRLDLSSNNFSGSIPFSVNNLTHLSGLFLENNGFSGSLPSIPALNLTGFNVSNNKLNGSIPETLSKFSAASFAGNLQLCGGPLPSCNPFFPSPAPSPTSSVKPPLIPVEKKSKKLSTAAIIGIVVASAVVAFILLFLLIFCLRKRERRQPAKPPNPVVAARSVPVEAGTFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVLAKKEFETQMEALGIVKHENVVPLRAFYYSRDEKLLVSDYMSAGSLSASLHGRTPLDWDNRMKIALSAARGLAHLHVSGKLVHGNIKSSNVLLRPNNDAAVSDFGLNPLFGTTTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVATVPDQRPSMQEVVRMIEDL 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5336821 5338765 - MC06g0646 Mch6g0772 690219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0772 489 Gene3D Phosphorylase Kinase; domain 1 205 300 - -
Mch6g0772 489 Pfam Leucine Rich Repeat 94 115 IPR001611 GO:0005515(InterPro)
Mch6g0772 489 Gene3D Transferase(Phosphotransferase) domain 1 301 489 - -
Mch6g0772 489 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Mch6g0772 489 SUPERFAMILY Protein kinase-like (PK-like) 230 486 IPR011009 -
Mch6g0772 489 Pfam Leucine rich repeat 1 59 IPR001611 GO:0005515(InterPro)
Mch6g0772 489 FunFam pollen receptor-like kinase 1 209 300 - -
Mch6g0772 489 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 301 489 - -
Mch6g0772 489 Gene3D Ribonuclease Inhibitor 95 135 IPR032675 -
Mch6g0772 489 PANTHER OS05G0588300 PROTEIN 1 488 IPR050994 -
Mch6g0772 489 Pfam Protein kinase domain 230 484 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0772 489 CDD STKc_IRAK 232 489 - -
Mch6g0772 489 ProSiteProfiles Protein kinase domain profile. 226 489 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0772 489 SUPERFAMILY L domain-like 1 119 - -
Mch6g0772 489 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1974 Mch-Chr5:19536445 Mch6g0772 Mch-Chr6:5336821 1.24E-78 dispersed
Mch6g0772 Mch-Chr6:5336821 Mch8g2297 Mch-Chr8:26130326 1.87E-120 dispersed
Mch6g0772 Mch-Chr6:5336821 Mch8g3115 Mch-Chr8:33507000 1.24E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77479 PF00069 Pkinase 1.20E-37 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0772 - - - 0.0