Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0781 CCAGCCGCTACGAGAGGCAATCGCTGTAAGATCGAGAGTGGGACGAATTTGGACGACGTTATGGCTACGAGATCAGGAAGGAAACCAGTGGTTGACGTATCTTTAATGGAGTCCACTACTCCGAAACGCAAACTGAGATCGAGTGATGCGCAGAGGCACCAAATCCCTGTCTCTGAGCCGATGAATCGGAAATCGTCTCGCCGGCGCCTCAATTCGAGTCCAGAAAGTCCGAATGTTTCTAAACACATGCAGATCGATGAGGAAACGTTTGATGATGGCTTTTCTAAATTACATAGTTCACCGGCAAAATTCTTGTTCAAGAGCCATACTGCCAAACCAGATTGGAATCCTAAAGATATTGAACATATAAAAGCGGCAAAGGAAGTGTTGCACGTATCGACGGCCCCGACTATAATCATGTGCCGTGAGGACGAGCAAAGTAGAATCTTAAATTTCTGCAAGACTTGTGTGGAGCAAGAAAAAGCCGGTAGTTTGTATGTTTGTGGGTGTCCAGGAACAGGCAAATCTTTGTCCATGGAAAAAGTGAAAGAGCAGTTGGCTGCTTGGGTAAGAGAGTCAGGTCTTCAGCTACCAGACATTTTGTCCATAAACTGCACCTCGTTAACAAATACTTCCGACATTTTCATGAAGATGGTGGGTGAAGCCCAATCACAAAAGAAAAGGAATGCCTCTTCAACACCCTTGCAACATCTCCAACGCTTATACTCTCAAAAGGCAGAGTCATCTAGCGTGAAGATGATGTTGATAATGGCTGATGAATTGGATTATTTAATTACAAAAGATAGAGCAGTGCTTCACGATTTGTTCATGCTCACAACTTTCCCATTTTCAAGATGTATTTTGATAGGAATTGCAAATGCCATTGACTTAGCGGATCGCTTTCTTCCGAAACTTCAGTCATTGAATTGCAAACCTCATGTTGTAACTTACAGGGCTTACTCCAAGGATCAGATCCTCAAGATTCTTCAACAAAGGTTAATTGTGCTTCCTTACGTTGTCTTTCAGCCACAAGCTTTGGAGTTCTGTGCTAGAAAAGTTGCAGCTGTGTCTGGAGATATGAGAAAAGCCCTTTGTGTTTGCAGGTCAGTGTTTTTAACTTCATTATGCGACTTTTTTTCCATAAAACTTACTTCTTTGTACAGGAATGCCATTGAATTGTTAGAGGTGGAACTCAAAGCATCCTCTAAGGAGCTGCACCATAATGAGGCGTGTGACACTTCAGCACCTGAGCTTGTAAAAAGACAAGAATTTGGGGTTGTGACGTTGGATCATATGGCTGTTGCCTTATCGAAAACTTTTAAATCACCAGTAGTGGAAACAATACAGTCTCTTCCTCAGCATCAACAGATTATTTTATGCTCTGTTGTGAAACTCGTTCATGGAGGGAAGAAGGATACAACCATAGGGGAGCTAAACAAATCGTATGTAGATAATTGTAGATCAGCCTCAATCCCACCAATGGGAACCTCAGAACTTTCAAATATGTTCACAGTGCTAAACGACCAGGGGCTTCTCAAACTTGGTCAGTCTCGAGAAAATAAATTGAGGCGAGTGCTGTTGAAAGTTGACGAAGCCGATGTACTGTTTGCACTTAAGGGAATACGCTTCTTTCGAAACTGGCTGCAATAA 1650 42.67 PAATRGNRCKIESGTNLDDVMATRSGRKPVVDVSLMESTTPKRKLRSSDAQRHQIPVSEPMNRKSSRRRLNSSPESPNVSKHMQIDEETFDDGFSKLHSSPAKFLFKSHTAKPDWNPKDIEHIKAAKEVLHVSTAPTIIMCREDEQSRILNFCKTCVEQEKAGSLYVCGCPGTGKSLSMEKVKEQLAAWVRESGLQLPDILSINCTSLTNTSDIFMKMVGEAQSQKKRNASSTPLQHLQRLYSQKAESSSVKMMLIMADELDYLITKDRAVLHDLFMLTTFPFSRCILIGIANAIDLADRFLPKLQSLNCKPHVVTYRAYSKDQILKILQQRLIVLPYVVFQPQALEFCARKVAAVSGDMRKALCVCRSVFLTSLCDFFSIKLTSLYRNAIELLEVELKASSKELHHNEACDTSAPELVKRQEFGVVTLDHMAVALSKTFKSPVVETIQSLPQHQQIILCSVVKLVHGGKKDTTIGELNKSYVDNCRSASIPPMGTSELSNMFTVLNDQGLLKLGQSRENKLRRVLLKVDEADVLFALKGIRFFRNWLQ 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5416202 5421887 - MC06g0655 Mch6g0781 690228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0781 549 Pfam Cdc6/ORC-like, ATPase lid domain 320 369 IPR054425 -
Mch6g0781 549 PIRSF Cdc6 382 549 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Mch6g0781 549 PIRSF Cdc6 7 372 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Mch6g0781 549 Gene3D - 444 536 IPR036388 -
Mch6g0781 549 SMART Cdc6_C_2 459 538 IPR015163 -
Mch6g0781 549 Pfam CDC6, C terminal winged helix domain 446 537 IPR015163 -
Mch6g0781 549 MobiDBLite consensus disorder prediction 1 84 - -
Mch6g0781 549 CDD AAA 145 307 - -
Mch6g0781 549 Gene3D - 141 309 IPR027417 -
Mch6g0781 549 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 38 544 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Mch6g0781 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 373 IPR027417 -
Mch6g0781 549 FunFam Cell division control protein 120 308 - -
Mch6g0781 549 Pfam AAA domain 161 281 IPR049945 GO:0016887(InterPro)
Mch6g0781 549 Gene3D - 310 374 - -
Mch6g0781 549 SUPERFAMILY Winged helix DNA-binding domain 444 546 IPR036390 -
Mch6g0781 549 CDD Cdc6_C 452 534 IPR015163 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0781 Mch-Chr6:5416202 Mch6g1154 Mch-Chr6:8703362 3.95E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0781 K02213 - csv:101205741 739.184