Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0790 GAAGCAGTTAACACTCAGATCCACTCCCTCAACTTTTACCCTTTCTTGTTTCTCCTTTTTGGTGATTCATTCATATTTATCTTATCCATTTACCATAATCTACCCTCCCCTATTTATATATTATCATTCCATTACACACAAAACAAACACTCCTCAAAAACTCAGACCTCTGTTTTTTGTTCAATGGGTTCGGTGAAAGGTGAGCATAATAATAATGTTAGCTTCGCGGCGCCGAGGCCATTCGTAACTCGGCTGAAATCTGATCTGAAAGAGACGTTTTTTCCGGATGATCCGTTCAAGCAATTTCAAGAAGATGGGCCTGGGCAGCAACTGAAGAAGGGTGTTCAATATTTCGTCCCCATTTTGGAATGGCTTCCAAAATACAACTTGAGTATGTTCAAATACGATTTGCTGGCTGGTATTACCATCACCAGCCTCGCCATCCCACAAGGCATCAGCTACGCCAAGCTCGCCAGTCTCCCTCCGATCATCGGCCTTTATTCAAGCTTTGTTCCGCCGTTGATTTACGCGGTGTTTGGATGTTCGAAGCATCTGGCGGTGGGGACCGTGGCGGCGTGTTCGTTGCTCATAGCGGATACAATTGGAGCAGTGGCTTCGCCGGAGAAAGAGCCCACATTGTATCTTCACCTGGTGTTCACCGCCACCTTCATCACTGGCATCTTTCAGTTCGCCTTGGGATTTCTAAGGCTGGGGATTTTGGTGGATTTCTTATCGCATTCGACGATCGTTGGGTTCATGGGAGGGACGGCGGTGATCATTTGCCTGCAACAATTGAAGGGCATTTTTGGACTCAAACGCTTCACTTCAAAAACCGACGTCTATTCCGTGCTTCGTGCAGTTATCAGCCTTAGACATGAGTGGAGATGGGAGAGTGCTGTGGTGGGCATCGTGTTCCTGATTTTTCTCCAGTTTACTAGGTTTCTGAGAGACAGAAGGCCGAAGCTATTTTGGGTCTCAGCGATGGCTCCGATGGTGACGGTCATAATTGGCTGTTTATTTGCATATTTCATCCATGGAGAAAAGCATGGAATCTTAACTGTGGGTCACTTGAGCAAAGGAATAAACCCTCTTTCTATTCACTTCTTGAACTTTGATTCTAAATATCTCCCAGCAGTGGCACAAGCTGCCCTCATCACTGGCCTTGTGGCTTTGGCTGAAGGAATAGCAATTGGCAGAAGCTTTGCAATAAAGAGAAATGAACAAATCGATGGGAATAAAGAGATGGTAGCCTACGGCCTAATGAACATCGTGGGATCATTCACTTCCTGCTACTTAACCACTGGGCCATTTTCAAAGACTGCAGTGAACTTCAACGCTGGGTGTAGGACAGCAATGTCCAACGTAGTAATGGCGATCTTCATGGCTCTGACCCTCCTTTTTCTGGCCCCTCTCTTCAGCTACACACCTCTTGTAGCTCTCTCCGCCATTATCATGTCCGCCATGTTTGGCCTTATCAAATATGAAGAATTCTATCATCTTTTTAAGGTCGACAAGTTCGATTTCTGCATTGCCATGGCTGCTTTCTTGGGCGTTGCCCTGTTGAGTATGGATATTGGAATCATGCTTTCGGTGGGACTTGCTTTGGTGAGAGCACTACTTTACATGGCTAGACCAGCAACTTGCAAGCTGGGGAAAATACCAGACTCCGCTTTTTACAGAGACGTGGAGCAGTATCCCGGTGCCATGAAAGCCCCTGGAATTATTGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACGCCAATTACATTAGGGAAAGGATTTTCAGATGGATCCGGGACGAGCAGGCCGCATCAGGTCCCAAAAAGGGATCCGTCCAACATGTACTGCTGGAGTTGAGCGGAGTTACATCCATCGACATGACAGGGATTGAAACTCTAGTCGAAGTCCGCAGATCGTTGCAAGCAAATGGAATTCAGATGGGAATCATAAACCCAAGAATTGTAGTGATGGAGAAGATGATAGCATCGCATTTCACAGAAACCATCGGCAAAGAGAATATCTATTTATCAGTTGACGATGGAGTAGAAAGTTGCAGAGTTACGGTTCATAAAACGAAGGAAGCCGATGAAAGTGATCGAAATTCAGATGTGACGGTGATGTAG 2127 45.84 EAVNTQIHSLNFYPFLFLLFGDSFIFILSIYHNLPSPIYILSFHYTQNKHSSKTQTSVFCSMGSVKGEHNNNVSFAAPRPFVTRLKSDLKETFFPDDPFKQFQEDGPGQQLKKGVQYFVPILEWLPKYNLSMFKYDLLAGITITSLAIPQGISYAKLASLPPIIGLYSSFVPPLIYAVFGCSKHLAVGTVAACSLLIADTIGAVASPEKEPTLYLHLVFTATFITGIFQFALGFLRLGILVDFLSHSTIVGFMGGTAVIICLQQLKGIFGLKRFTSKTDVYSVLRAVISLRHEWRWESAVVGIVFLIFLQFTRFLRDRRPKLFWVSAMAPMVTVIIGCLFAYFIHGEKHGILTVGHLSKGINPLSIHFLNFDSKYLPAVAQAALITGLVALAEGIAIGRSFAIKRNEQIDGNKEMVAYGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNVVMAIFMALTLLFLAPLFSYTPLVALSAIIMSAMFGLIKYEEFYHLFKVDKFDFCIAMAAFLGVALLSMDIGIMLSVGLALVRALLYMARPATCKLGKIPDSAFYRDVEQYPGAMKAPGIIVLQLGSPVYYANANYIRERIFRWIRDEQAASGPKKGSVQHVLLELSGVTSIDMTGIETLVEVRRSLQANGIQMGIINPRIVVMEKMIASHFTETIGKENIYLSVDDGVESCRVTVHKTKEADESDRNSDVTVM 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5494502 5498554 - MC06g0664 Mch6g0790 690237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0790 708 CDD STAS_SulP_like_sulfate_transporter 565 679 - -
Mch6g0790 708 Pfam Sulfate permease family 133 514 IPR011547 GO:0016020(InterPro)
Mch6g0790 708 ProSiteProfiles STAS domain profile. 564 686 IPR002645 -
Mch6g0790 708 SUPERFAMILY SpoIIaa-like 568 686 IPR036513 -
Mch6g0790 708 FunFam Sulfate transporter 31 544 689 - -
Mch6g0790 708 Pfam STAS domain 569 681 IPR002645 -
Mch6g0790 708 NCBIfam sulfate permease 120 681 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g0790 708 Gene3D STAS domain 544 689 IPR036513 -
Mch6g0790 708 PANTHER SULFATE TRANSPORTER 108 687 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0790 Mch-Chr6:5494502 Mch9g0897 Mch-Chr9:6980842 6.65E-251 dispersed
Mch5g0562 Mch-Chr5:3798306 Mch6g0790 Mch-Chr6:5494502 1.61E-248 wgd
Mch6g0790 Mch-Chr6:5494502 Mch9g0363 Mch-Chr9:2664778 7.23E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0790 K17471 - csv:116402148 1057.74