Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0791 ATGGACAGTCACTCCAACGGAGACTCTCGATCCCATCCCAACATACCCAAAATCAAGTTCACCAACCTCTTCATCAATGGACAATTCGTTGACTCTCTTTCAGCGAAAACGTTCGAGACCATAGATCCAAGAACCGGTGAGGTTATCGCGACGGTAGCCGCCGGAGACAAAGACGACGTCGATCTGGCGGTGAAAGCCGCCCGTGAAGCCTTCGACCACGGCCCTTGGCCCCGCATGCCCGGCGCCGAGAGGGGGAAGATAATGATGAAACTGGCGGACTTGATTGATGCACACGTGGAGGAATTGGCAGCGTTGGATACGATCGACGCGGGAAAATCGTTTATGATGGGGAAGATTGGGGACATTCCGTCGGCTGCGAACACGCTACGGTACTACGCAGGTGCAGCGGATAAAATCCACGGGGAGGTTTTGAAAATGGCTAGGCCGTTTCACGGGTACACGTTGCTGGAGCCCATTGGCGTGGTGGGCCACATCATTCCGTGGAACTTTCCGACGACCATGTTCTTCTTGAAGACGAGCCCGGCGTTGGCCGCCGGCTGCACCATGGTCGTAAAGCCCGCCGAGCAAACGCCGCTCTCCGCCCTCTTCTACGCCCATCTCGCCAACCTGGCTGGAGTTCCAGATGGAGTACTAAACGTGGTGACTGGTTTTGGGTCCACTGCCGGAGCAGCCCTTGCCTCCCACATGGACGTGGACAAGGTGAGCTTCACTGGCTCAACGAAGGTGGGACGGCTAATAATGCAGGCGGCAGCTGCTAGCAATCTGAAGCAGGTTTCACTCGAATTAGGAGGCAAATCGCCACTCCTAATCTTCGACGATGCGGATGTCGATAAGGCCGCTGAACTCGCCCTCCTCGGCATTTTTTATAACAAGGGCGAAATTTGCGTGGCCAGCTCCCGAGTGTTGGTTCAAGAAGGGATCTATGACGAATTTGTGAAAAAGATTAGTGAAAAAGTTAAGTCTTGGGTGGTGGGAGACCCTTTTGATCCTAAAGTGAAATATGGACCCCAGGTGGATAAAAAGCAATTAGAGAAAATTCTATCGTACATAGAACATGGGAAGAGAGAAGGGGCGACCTTGCTGGCCGGTGGGAAGCGGATTGGCGATGTGGGGTATTACATCCAGCCCACCATCTTCACAGATGTCAAGGAAGACTCGCTGATTGCCCAGGACGAAATATTCGGGCCGGTGCTGTCGGTCATAAAATTCAAGACGATTGAGGAGGGAATAAAGAGCGCGAACAACACAAAGTACGGGCTGGCAGCAGGGATCGTGACGAACAACATAGACGTGGCGAACACAGTGTCTCGGTCGATCCGAGCAGGTTCGATATGGATCAATTGCTACTTCGCTTTCGACGCGAGCAGCCCCTTTGGAGGCTACAAAATGAGTGGGTTCGGTAGAGACTCCGGAATGCATGCTATCCACAAGTATCTCCAAGTCAAAAGCGTGGTTACTCCTTTGCTCAACACTCCTTGGCTTTAA 1506 52.99 MDSHSNGDSRSHPNIPKIKFTNLFINGQFVDSLSAKTFETIDPRTGEVIATVAAGDKDDVDLAVKAAREAFDHGPWPRMPGAERGKIMMKLADLIDAHVEELAALDTIDAGKSFMMGKIGDIPSAANTLRYYAGAADKIHGEVLKMARPFHGYTLLEPIGVVGHIIPWNFPTTMFFLKTSPALAAGCTMVVKPAEQTPLSALFYAHLANLAGVPDGVLNVVTGFGSTAGAALASHMDVDKVSFTGSTKVGRLIMQAAAASNLKQVSLELGGKSPLLIFDDADVDKAAELALLGIFYNKGEICVASSRVLVQEGIYDEFVKKISEKVKSWVVGDPFDPKVKYGPQVDKKQLEKILSYIEHGKREGATLLAGGKRIGDVGYYIQPTIFTDVKEDSLIAQDEIFGPVLSVIKFKTIEEGIKSANNTKYGLAAGIVTNNIDVANTVSRSIRAGSIWINCYFAFDASSPFGGYKMSGFGRDSGMHAIHKYLQVKSVVTPLLNTPWL 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5504644 5509166 - MC06g0665 Mch6g0791 690238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0791 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 20 493 - GO:0004029(PANTHER)
Mch6g0791 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 290 - -
Mch6g0791 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620(InterPro)
Mch6g0791 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Mch6g0791 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491(InterPro)
Mch6g0791 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491(InterPro)
Mch6g0791 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491(InterPro)
Mch6g0791 501 SUPERFAMILY ALDH-like 17 497 IPR016161 GO:0016491(InterPro)
Mch6g0791 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491(InterPro)
Mch6g0791 501 FunFam Aldehyde dehydrogenase3 271 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0759 Mch-Chr2:5207277 Mch6g0791 Mch-Chr6:5504644 3.87E-110 dispersed
Mch6g0160 Mch-Chr6:1068521 Mch6g0791 Mch-Chr6:5504644 1.37E-200 dispersed
Mch6g0182 Mch-Chr6:1220730 Mch6g0791 Mch-Chr6:5504644 4.36E-117 dispersed
Mch6g0791 Mch-Chr6:5504644 Mch7g1231 Mch-Chr7:15892344 2.78E-68 dispersed
Mch6g0791 Mch-Chr6:5504644 Mch8g0005 Mch-Chr8:44312 1.44E-206 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0791 K12355 - csv:101219029 863.218