Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0807 ATGTCGGCTCCGGCTCCGACCGCGCCGCCGGCTACGAACTCCACCTCACCCCCACCTCCGACCACAACCGCGCCACCCCCAGCCACTCCGTCTCTCTCGCCGCCGCCTCCTGCTACTCTCTCAGCCTCCACCTGCTTCATCGCCGCCGCCCTCCACCACTCCTTCGCCGCCTCCTCCAAACACTACCACTCCATCTCCGCCTACTTCTACTCCTTCGCCGACCGCGCCTTCCAGCTCTCCTCCGCCGCCGCCGTCTACCGACTCGCCAGCTCCCCCACAGCTGCCGAGTCCCACCCCACCGTCGAATCCTGGTTCACCTGCGAATCCCGGAGGAAGTCAGATTCCGCCCTCGGAACCACGCCAAAGAAGAGGAGACACGACGAGGAGGCATACTACCGGCCGCCGCCGCCTCCACCGGCGCCGTATAAAGATGATCCATACGGTCCCCAGCACCAGCAGTACCAATGGCAACCACATCCGGCGCCGCCGGTAGATCATGTCGTAGGGGCAATTCCAAAGCCGTCTCCTCCACCAGCATTACGGCCACCGCCGTCACCTCCGATTATAAGCAGCAGCGGAGGGTCTGGATCTAACTATTCAGGGTCTGAAAATTCGCTGGCTCCTGCCCCATCTGGCATTACCTTGGGCTTCTCACAGAGCAGTTTTACTTATGAAGAATTAGCAATGGCGACGGATGGATTCTCGGAGGCTAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCACAGAGGAGTCCTTCCAAACGGGAAGGAAGTGGCAGTGAAGCAACTTAAAGCTGGAAGTGGGCAGGGAGAGCGAGAATTTCAAGCAGAAGTTGAAATAATCAGCCGAGTTCATCACAGACATCTTGTTTCCTTGGTGGGATATTGCATCACCGGCTCCAAAAGATTGCTGGTTTATGAATTTGTTCCGAATAACACTTTGGAGTTCCATTTGCACGGGAAAGGACGACCTACCATGGATTGGCCAACAAGACTGAAAATTGCTCTGGGATCTGCCAAGGGATTGGCTTACCTTCATGAGGACTGTAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAATATACTTTTGGATCTCAAATTCGAAGCCAAGGTCGCAGATTTTGGGCTTGCCAAGTTATCTTCTGATGTTAATACCCATGTTTCAACCCGAGTCATGGGAACTTTCGGATATCTTGCTCCTGAATACGCTTCAAGTGGGAAACTTACCGAAAAATCAGATGTCTTCTCCTTCGGAGTGATGCTTCTGGAGTTGATTACCGGACGCAGACCTGTGGACACAACTCAATCCTTCATGGACGATGGATTGCTCGATTGGGCAAGGCCTCTACTGCTTCGGGCCACAGAAGAAGGAAACTACGACGGTCTGATAGATCCAAGGCTGCGAGACGAGTACGACCACAACGAGATGGGTCGCATGGTTGCTTGCGCCGCCGCCTGTGTGCGTCATTCGGCGAGGCGCCGGCCACGGATGAGTCAGGTGGTTCATGCTCTGGAAGGTGAGTCGTCGCTTTCTGATCTTAACGAAGGAATCCGGCCCGGACATAGCACCGTCTACAGCTCCGACTACGACACGGCTCAGTACAACGAGGACCTGAAGAAGTTCAGGAAGATGGCATTGGCGAGCCAGGAGTACGGCGCCGGCAGTGAGTACAGCGAGCCGACGAGTGAGTACGGTCTGTATCCATCGGGGTCGAGCGGCGACGGCCAAACCACCCGGGAAATGGAGATGAGAACGATGAAGAAAGAAAGTGGAGGTTTTAGCGGAAGCTCGTGA 1803 55.19 MSAPAPTAPPATNSTSPPPPTTTAPPPATPSLSPPPPATLSASTCFIAAALHHSFAASSKHYHSISAYFYSFADRAFQLSSAAAVYRLASSPTAAESHPTVESWFTCESRRKSDSALGTTPKKRRHDEEAYYRPPPPPPAPYKDDPYGPQHQQYQWQPHPAPPVDHVVGAIPKPSPPPALRPPPSPPIISSSGGSGSNYSGSENSLAPAPSGITLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTTQSFMDDGLLDWARPLLLRATEEGNYDGLIDPRLRDEYDHNEMGRMVACAAACVRHSARRRPRMSQVVHALEGESSLSDLNEGIRPGHSTVYSSDYDTAQYNEDLKKFRKMALASQEYGAGSEYSEPTSEYGLYPSGSSGDGQTTREMEMRTMKKESGGFSGSS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5618986 5621809 + MC06g0681 Mch6g0807 690254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0807 600 MobiDBLite consensus disorder prediction 105 132 - -
Mch6g0807 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0807 600 SUPERFAMILY Protein kinase-like (PK-like) 212 507 IPR011009 -
Mch6g0807 600 FunFam proline-rich receptor-like protein kinase PERK1 212 309 - -
Mch6g0807 600 MobiDBLite consensus disorder prediction 1 36 - -
Mch6g0807 600 Pfam Protein tyrosine and serine/threonine kinase 238 507 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0807 600 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 95 547 IPR047117 -
Mch6g0807 600 SMART serkin_6 234 507 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0807 600 ProSiteProfiles Protein kinase domain profile. 234 508 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0807 600 MobiDBLite consensus disorder prediction 165 189 - -
Mch6g0807 600 MobiDBLite consensus disorder prediction 556 600 - -
Mch6g0807 600 ProSitePatterns Protein kinases ATP-binding region signature. 240 262 IPR017441 GO:0005524(InterPro)
Mch6g0807 600 MobiDBLite consensus disorder prediction 91 205 - -
Mch6g0807 600 MobiDBLite consensus disorder prediction 190 205 - -
Mch6g0807 600 Gene3D Phosphorylase Kinase; domain 1 209 309 - -
Mch6g0807 600 FunFam Proline-rich receptor-like protein kinase PERK1 310 518 - -
Mch6g0807 600 Gene3D Transferase(Phosphotransferase) domain 1 310 519 - -
Mch6g0807 600 MobiDBLite consensus disorder prediction 565 582 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0737 Mch-Chr10:5096432 Mch6g0807 Mch-Chr6:5618986 1.27E-179 dispersed
Mch2g1117 Mch-Chr2:7588500 Mch6g0807 Mch-Chr6:5618986 2.80E-42 dispersed
Mch2g1121 Mch-Chr2:7619496 Mch6g0807 Mch-Chr6:5618986 2.41E-159 dispersed
Mch4g2400 Mch-Chr4:25103365 Mch6g0807 Mch-Chr6:5618986 4.20E-84 dispersed
Mch6g0807 Mch-Chr6:5618986 Mch9g2244 Mch-Chr9:22849797 1.81E-156 dispersed
Mch8g1214 Mch-Chr8:8673383 Mch6g0807 Mch-Chr6:5618986 6.07E-59 dispersed
Mch8g2748 Mch-Chr8:30661916 Mch6g0807 Mch-Chr6:5618986 2.91E-79 dispersed
Mch9g0468 Mch-Chr9:3472113 Mch6g0807 Mch-Chr6:5618986 1.86E-39 dispersed
Mch9g1693 Mch-Chr9:18912012 Mch6g0807 Mch-Chr6:5618986 9.07E-71 dispersed
Mch9g2027 Mch-Chr9:21513695 Mch6g0807 Mch-Chr6:5618986 4.44E-67 dispersed
Mch5g0538 Mch-Chr5:3578965 Mch6g0807 Mch-Chr6:5618986 8.73E-40 wgd
Mch6g0807 Mch-Chr6:5618986 Mch8g3147 Mch-Chr8:33763076 7.61E-248 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77480 PF07714 PK_Tyr_Ser-Thr 5.10E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0807 - - - 0.0