Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0835 ATGGGTTGCGTTTATTCGAGGGTTTGTATCGGCGAGCCTTCTTCTTCTACTCCAAAAACTGCGAGAACAACCGGAACACAATATGCGAAACCTGGCGCTGAAATCGACACGATCTCTTCTTCGTCTTCCGATAGCCAAGAAGCCGAAGTCGGTGACCGGCTGAATCAATTGAGCTCAAACAACAGAGATTCAGAAGTCGGAATCACGAGGCTCTCGAGAGTTTCGTCGCAGTTCTTGCCCGCCGATGGGTCCCGAATCGTCAAGGTTCCTTCTGGAAACTTTGAATTGCAGTATTCGTTTCTTTCGCAAAGAGGGTATTACCCCGATGCCCTCGATAAGGCGAACCAAGACAGTTTTTGCATCCACACCCCATTTGGGAATAGCCCAGATGACCATTTCTTTGGGGTTTTCGATGGGCATGGGGAATTTGGAACACAGTGCTCGCAGTTCGTAAAACGGAAGCTATGTGAAAATTTACTTAGGAATAGTAGGTTCCACAGTGACGCAGTTGAGGCATGCCATGCAGCGTTTCTGACCACTAATTCACAGTTACACGCAGATATCTTGGATGATAGCATGAGCGGTACTACTGCCATTACTGTTTTAGTTAGAGGTAGGACTATATATGTAGCTAATTCAGGTGATTCGAGAGCGGTTCTAGCAGAGCGGAGAGGGAAGGAAGTTGTAGCGGTCGACCTCTCGATCGATCAAACTCCATTCCGAACCGATGAAGTTGAACGTGTTAAGCTTTGTGGTGCTAGAGTTCTTACACTTGATCAGATCGAGGGGCTGAAAAACCCGGATGTTCAGTGCTGGGACACTGAAGAAGGAGATGATGGTGATCCTCCAAGGCTGTGGGTGCCTAATGGGATGTACCCTGGCACAGCTTTCACCAGAAGTATAGGTGACTCAATTGCTGAGACTATTGGAGTTGTCGCTACGCCTGAAATTGTTGTTCTGGAGCTGACACCGGATCATCCTTTCTTTGTTGTTGCTAGTGATGGAGTATTTGAGTTTCTTTCGAGCCAGATGGTTGTTGATATGGTTTCCAAGTATAAAGATCCCCGCGATGCTTGTGCTGCAATTGTGGCTGAGTCTTACAGACTTTGGCTTCAGTTTGAAACACGAACAGATGATATCACTGTTATTGTGGTGCATATTAATGGGCTAACTGATATGGTTAATAGTGAATCAACAAGATCCAGCAGTGGTGGTTTTACTCGATCTCCAATTCCTCAAGTCGTGGAAGTTACAGGATCAGAATCTCCCTCTACCTTTGGCTGGAACAGGAATCACCGTGTGAGGCAAGATTTGTCAAGGGCACGTCTCCGGGCTATTGAAAGTTCCCTAGAGAATGGGCAAGTCTGGGTGGCTCCATCTCCAGCCCACAGGAAGACTTGGGAAGAAGAAGCACATATTGAACGGGCATTGCACGACCATTTCCTCTTCAGAAAACTAACTGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTTGAGGTCCTACCGGGACAAATTGTAGTCGAACAAGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGCAGTGGAGAATTTGAGGTTTTGACAACCCAGGAAGAAAACAATTTGGAGGTCCCCCGGGTTCTGCATCACTATACAGCTGAGAAGCTATCTTCCTTCGGGGAATTGGCTTTGATGTATAACAAACCACTTCAAGCCTCGGTACGTGCTGTGACGAGTGGGACACTCTGGGCTTTGAAAAGAGAGGATTTTCGTGGAATTCTTATATCAGAATTTTCTAATTTGTCATCTTTGAAATTGCTTCGATCTGTGGACCTTCTGTCGAAGTTAACAATCTTGCAATTGAGTCACATTGCAGATTGCCTTTCTGAAGTTACGTTCTCAGATGGGCAGCTTATAGTTGATGGGACCGAAGACTTATGTGCATTGCACATTGTTCAAAAGGGACAAGTGAGGATTACTTTTGATGCTGAGATAATGAGCAGTTCAAACGTTTACAGCTTCAATTATGCCACTAAAAAAGAGGATGATTCTGCACAGAGTGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGGAGTTATTTTGGCGAATGGGCACTTCTTGGTGACCGTATTGGCTTCTTACGAGCAGTTGCTTTGGGAGATGCTGTGTGCGCTATTCTAACAAAGGAAAAGTTTGAGTCAGTTGTTGGCCCTTTACCAAAGCCCTCTCAAGATAATCAAAGGGCAAAGGAACATTCTTCAGACAATCTCCATCACTCTGCCAAAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTCACTGATCTGGAGTGGATAACTTGTTTATATTCCACAGAATACAGCGAGATTGGGCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGGTTTACCAGACAGAAGGTCAAAAGGCTGGGACTAGAAGCACAAGTTTTGAAGGAGAAAAACCTTATGAAGAGCATCAGTCCTTCAGCTTGCATGCCGCAATTTCTCTGCACTTGTTTAGATCGATCACATGCTGGCATATTGCTAAAAACGTGCCTTGCTTGTCCTTTGTCTTCGATACTTCATGTCCCGCTCGATGAATCTTCGGCACGTTTCTGTGCAGCCTCACTTGTCACAGCATTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCTGATGTTCTAATGTTGGATCAAACTGGACGCATACAGTTAATAGACTTCAGATTTGGGAAGAAAACATCCGGCGAGAGAACGAATACTATTTGCGGGACTGCAGACTTTTTAGCACCCGAGATAGTTCAGGGCAATGGTCATGGTTTCACTGCTGACTGGTGGGCACTGGGAGTCTTAATCTATTTCATGCTGAAAGGTGAAATGCCATTCGGATCATGGAGACAAAGCGAGCTCGATACTTTTTCAAAGATTGCAAAAGGACAACTAAGTCTTCCCCAGATTTTCAGTCCTGAAGCCATTGATCTCATTGTCAAGTTACTTGAAGTTGATGAGAAGAAAAGGCTTGGAAGTGAGAATCCGAACTCTGTAAGAAGACATCCATGGTTTAATGGTGTTGATTGGAAGGGGATCCATGATGGTACCTTTCCCGTTCCTGATGCAATCACTTCTCGTGTGGCTCAATATTTGGAGAGCTACGCTGAAGATTGCAGCGTTTCTTTAGTTAAACCGCCTCAAGATCCCGAAGAACAGGACGCCACCGATTGGATCAACGACTGGTAG 3255 44.82 MGCVYSRVCIGEPSSSTPKTARTTGTQYAKPGAEIDTISSSSSDSQEAEVGDRLNQLSSNNRDSEVGITRLSRVSSQFLPADGSRIVKVPSGNFELQYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAFLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVLAERRGKEVVAVDLSIDQTPFRTDEVERVKLCGARVLTLDQIEGLKNPDVQCWDTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDHPFFVVASDGVFEFLSSQMVVDMVSKYKDPRDACAAIVAESYRLWLQFETRTDDITVIVVHINGLTDMVNSESTRSSSGGFTRSPIPQVVEVTGSESPSTFGWNRNHRVRQDLSRARLRAIESSLENGQVWVAPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVLPGQIVVEQGGEGDCFYVVGSGEFEVLTTQEENNLEVPRVLHHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIADCLSEVTFSDGQLIVDGTEDLCALHIVQKGQVRITFDAEIMSSSNVYSFNYATKKEDDSAQSGKEISVIKKEGSYFGEWALLGDRIGFLRAVALGDAVCAILTKEKFESVVGPLPKPSQDNQRAKEHSSDNLHHSAKIMDISALSKVELTDLEWITCLYSTEYSEIGLVRLRNTETMLSLKRFTRQKVKRLGLEAQVLKEKNLMKSISPSACMPQFLCTCLDRSHAGILLKTCLACPLSSILHVPLDESSARFCAASLVTALEDLHKLGVLYRGISPDVLMLDQTGRIQLIDFRFGKKTSGERTNTICGTADFLAPEIVQGNGHGFTADWWALGVLIYFMLKGEMPFGSWRQSELDTFSKIAKGQLSLPQIFSPEAIDLIVKLLEVDEKKRLGSENPNSVRRHPWFNGVDWKGIHDGTFPVPDAITSRVAQYLESYAEDCSVSLVKPPQDPEEQDATDWINDW 1084
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5783066 5789523 + MC06g0706 Mch6g0835 690282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0835 1084 ProSiteProfiles Protein kinase domain profile. 773 1027 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0835 1084 MobiDBLite consensus disorder prediction 1065 1084 - -
Mch6g0835 1084 SUPERFAMILY cAMP-binding domain-like 599 736 IPR018490 -
Mch6g0835 1084 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 456 596 - -
Mch6g0835 1084 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169(InterPro)
Mch6g0835 1084 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 354 1060 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Mch6g0835 1084 MobiDBLite consensus disorder prediction 33 61 - -
Mch6g0835 1084 SMART cnmp_10 608 747 IPR000595 -
Mch6g0835 1084 SMART cnmp_10 482 605 IPR000595 -
Mch6g0835 1084 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 92 389 - -
Mch6g0835 1084 Gene3D Jelly Rolls 596 751 IPR014710 -
Mch6g0835 1084 CDD CAP_ED 608 736 IPR000595 -
Mch6g0835 1084 SUPERFAMILY cAMP-binding domain-like 462 591 IPR018490 -
Mch6g0835 1084 Gene3D Jelly Rolls 450 590 IPR014710 -
Mch6g0835 1084 SUPERFAMILY Protein kinase-like (PK-like) 759 1055 IPR011009 -
Mch6g0835 1084 SMART serkin_6 780 1027 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0835 1084 CDD PP2Cc 113 387 IPR001932 -
Mch6g0835 1084 SMART PP2C_4 93 385 IPR001932 -
Mch6g0835 1084 PRINTS cAMP-dependent protein kinase signature 553 562 - -
Mch6g0835 1084 PRINTS cAMP-dependent protein kinase signature 518 532 - -
Mch6g0835 1084 PRINTS cAMP-dependent protein kinase signature 503 517 - -
Mch6g0835 1084 PRINTS cAMP-dependent protein kinase signature 728 740 - -
Mch6g0835 1084 CDD CAP_ED 482 590 IPR000595 -
Mch6g0835 1084 ProSiteProfiles cAMP/cGMP binding motif profile. 482 590 IPR000595 -
Mch6g0835 1084 SUPERFAMILY PP2C-like 85 389 IPR036457 -
Mch6g0835 1084 ProSiteProfiles cAMP/cGMP binding motif profile. 608 734 IPR000595 -
Mch6g0835 1084 Pfam Protein phosphatase 2C 125 365 IPR001932 -
Mch6g0835 1084 Pfam Protein kinase domain 784 1027 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0835 1084 Gene3D Transferase(Phosphotransferase) domain 1 858 1040 - -
Mch6g0835 1084 Gene3D - 92 388 IPR036457 -
Mch6g0835 1084 MobiDBLite consensus disorder prediction 14 61 - -
Mch6g0835 1084 Gene3D Phosphorylase Kinase; domain 1 771 857 - -
Mch6g0835 1084 ProSiteProfiles PPM-type phosphatase domain profile. 97 387 IPR001932 -
Mch6g0835 1084 Pfam Cyclic nucleotide-binding domain 501 590 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0835 Mch-Chr6:5783066 Mch7g1117 Mch-Chr7:15125580 6.46E-135 dispersed
Mch6g0835 Mch-Chr6:5783066 Mch5g0651 Mch-Chr5:4335453 1.76E-137 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77481 PF00069 Pkinase 3.70E-36 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0835 - - - 0.0