Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0858 ATGACGAGACCTCCCTTTTCTCATCTCTTTTTGGGGAACACAGTTTCCTTCTTTCTCCTCCTCCTCTGCACCAGCCATGCCGATTCCCAGCTCTACGACCAAGAACACTCTGTTCTTCTCCGATTGAACCACTTCTGGCAAAACCCACCGCCGATCAGCCAATGGCAGACCTCAAACGTTTCTCACTGTTCATGGCCGGAGATTGAATGCTCCAACAACTCTGTCACTGATCTGCTTTTCGTCAACTACAATATCACCGGAACCCTACCGCCTTTCATCTGCGATCTCAAGAATCTCACCCTGCTTAATCTTCAGCTCAATTTTATCCCCGGTGGCTTTCCGACGGTTCTTTACAACTGTTCGAAGCTTAATTACCTAGATCTCTCGATGAATTACTTCGTTGGGCCGATTCCCAACGATGTTGACCGCCTGTCTCGGCTCCAGTTTCTTAGTCTCGCCGGCAACAACTTCTCCGGCGACATTCCGGCATCCATTGGTCGGCTGTCGGAACTCCGCTCCCTTTACCTACACATGAATCAGTTCAACGGCAGTTACCCCTCTGAAATCGGTAACTTATCCAATCTGGAAGAATTGCTGATGTCTTACCTTAAAAATCTGATACCGGCAGAATTGCCTTCCAGTTTTGCGCAATTGAAGAAATTGAAGTACATATGGATGACAGAGTCGAACGTAATCGGTGAATTTCCGGAATGGATCGGTAATTGGACCGCTCTCGAGATTTTGAATTTGTCGAAGAACAGATTGGTTGGGAAAATCCCCAGCAGTTTGTTTGCATTGAAGAATCTCTCTCAGGTTTTTCTGTTCCGGAACAATATATCCGGAGAAATTCCTCAGCGGATTGAATCTGAAAAACTCATCGAATTCGACCTATCGGAGAATAATTTGACCGGAAAAATACCGGAGGATATCGGTAATCTTCAGCAATTGGAGGCTCTGATTCTGTTTTCAAATCACTTATCTGGAGAAATCCCAGAAAACATCGGCCGTCTTCCATTTTTGACAGACATCAGATTGTTCAACAACAATTTAACCGGAACACTGCCTCCAGATCTCGGCCGGTATTCGATTCTCGAAAGTTTTCAGGTGAGCTGGAATAAGCTCACCGGAAGCTTGCCGGTGCACTTGTGCTCCGGCCGAAAGCTTCTGGGACTGACTGCTGCCGAGAATAATCTTAGTGGGGAATTACCTGAATCGCTCGGTAATTGCAATAGCATGAAGATTATTGATGTTCATAAAAACAACTTATCTGGGGTTATTCCGGCGGGTTTATGGATGTCCCTCAATTTGACTTATGTAACATTGAGCGACAATTCTTTCACCGGCGAACTCCCTGAGAAAGTCTCGGCGAACCTTTGGAGATTCGAAATCAGTAACAACAAATTTTCCGGGAAAATCCCGTCTGGGATATTTTCGTGCTGGAATTTGACGGTGTTTGAAGCAAGCAATAATTTGCTCACAGGACAAATTCCCGAAGAACTCGCTGCTCTTTCAAAGTTGATCAAAATTTCGCTCGACGGAAATCAACTCGTCGGAGATATTCCACGGAAAATCATCTCATGGAAATCGTTGACTAATCTAAACCTCAGTCATAATCGTCTTTCCGGCGAAATCCCCGTCGAACTTGGTCGTTTACCAAGCCTCACCGATCTTGACCTTTCAGATAATCAACTTTCCGGGACGGTTCCGCCTCAACTGGGAAATCTAGAGCTGAATTTTCTAAACCTCTCTTCGAATTTTCTGTCCGGGAAAATCCCAATTTCACTTGAAAGCGCTATCTATGCAAGAAGCTTTTTGAACAATCCGAGTCTCTGTTCCAATAATGCAGTTCTGAATCTCGACGGCTGCAGTTTCAGGCAACAGAATTCGAGAAAGGTTTCATCACGACATCTTGCTCTGATTGTGAGCTTGGGCGCGATACTGTTCATACTGTTCGTACTTTCTTCTCTCTACATAATCAAAATTTACAGGAAGACTAAAAACAGAGCAGATGTGGAATGGAAGCTGACCTCATTCCAGAGGCTGAATTTCTCGGAGGCAAAACTTTTATCTGGGCTAACGGAAAACAACATGGTCGGAAGCGGTGGATCCGGGAAAGTTTACCGGATTCCGGTGAACAATTTTGGCGATACAGTGGCGGTGAAAAGGATATGGAACAACAGAAAGTCAGATCACAAGCTCGAGAAAGAATTCATGGCGGAAGTCAAGATTCTCAGTTCAATTCGACATAACAACGTAATCAAACTCCTCTGCTGCGTTTCTTCTGAAAGTTCACGGCTTCTGGTTTACGAGTACATGGAGGGACAGAGCCTGGACAAATGGCTACACAAGAAGAACACGCCGCCGAGAATTCCCGGGTCGGACTCTGTTTCCGGCGTGGCCCTTGATTGGCCGACGAGATTTCAAATTGCAGTTGGGGCGGCGCAGGGCCTCTGCTATATGCACCATGATTGCTCACCCCCAGTTATTCACAGAGATTTGAAGTCCAGCAATATCTTGCTTGATTCAGAGTTCAACGCCAAAATTGCAGATTTTGGGTTGGCCAAGTTGCTGGTGAAGCAAGGGGAACCGGCTTCGGTCTCGGCTGTCGCTGGCTCTTTCGGATACATAGCTCCAGAGTATGCTCAGACACCGAGAATTAACGAGATGATCGACGTGTTTAGCTTTGGGGTTATTCTTCTAGAGTTGGCGACCGGAAAGGATGCTCTCAACGGCGATGAAGACTCGTCTCTGGCCGAGTGGGCGTGGGGTTACATTCGAGAAGGCAAGCCCTTGGCCAATGCGTTGGATGAGGATGTGAAGGAGCCACTCTATGTTGATGAAATGTGCAGTGTTTTCAAACTGGGAGTGATCTGCACTTCCACATCGCCGTCCGTTCGGCCCACCATGAACCAGGCTCTGGAAATCTTGATCCGCAGCCGGACCTCAGCACCCGAAACCCAAAGCCACGGACATAAAAAATCCTAA 2985 46.67 MTRPPFSHLFLGNTVSFFLLLLCTSHADSQLYDQEHSVLLRLNHFWQNPPPISQWQTSNVSHCSWPEIECSNNSVTDLLFVNYNITGTLPPFICDLKNLTLLNLQLNFIPGGFPTVLYNCSKLNYLDLSMNYFVGPIPNDVDRLSRLQFLSLAGNNFSGDIPASIGRLSELRSLYLHMNQFNGSYPSEIGNLSNLEELLMSYLKNLIPAELPSSFAQLKKLKYIWMTESNVIGEFPEWIGNWTALEILNLSKNRLVGKIPSSLFALKNLSQVFLFRNNISGEIPQRIESEKLIEFDLSENNLTGKIPEDIGNLQQLEALILFSNHLSGEIPENIGRLPFLTDIRLFNNNLTGTLPPDLGRYSILESFQVSWNKLTGSLPVHLCSGRKLLGLTAAENNLSGELPESLGNCNSMKIIDVHKNNLSGVIPAGLWMSLNLTYVTLSDNSFTGELPEKVSANLWRFEISNNKFSGKIPSGIFSCWNLTVFEASNNLLTGQIPEELAALSKLIKISLDGNQLVGDIPRKIISWKSLTNLNLSHNRLSGEIPVELGRLPSLTDLDLSDNQLSGTVPPQLGNLELNFLNLSSNFLSGKIPISLESAIYARSFLNNPSLCSNNAVLNLDGCSFRQQNSRKVSSRHLALIVSLGAILFILFVLSSLYIIKIYRKTKNRADVEWKLTSFQRLNFSEAKLLSGLTENNMVGSGGSGKVYRIPVNNFGDTVAVKRIWNNRKSDHKLEKEFMAEVKILSSIRHNNVIKLLCCVSSESSRLLVYEYMEGQSLDKWLHKKNTPPRIPGSDSVSGVALDWPTRFQIAVGAAQGLCYMHHDCSPPVIHRDLKSSNILLDSEFNAKIADFGLAKLLVKQGEPASVSAVAGSFGYIAPEYAQTPRINEMIDVFSFGVILLELATGKDALNGDEDSSLAEWAWGYIREGKPLANALDEDVKEPLYVDEMCSVFKLGVICTSTSPSVRPTMNQALEILIRSRTSAPETQSHGHKKS 994
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5960452 5965021 + MC06g0725 Mch6g0858 690305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0858 994 SUPERFAMILY Protein kinase-like (PK-like) 686 976 IPR011009 -
Mch6g0858 994 SMART serkin_6 692 992 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0858 994 Gene3D Ribonuclease Inhibitor 290 458 IPR032675 -
Mch6g0858 994 Gene3D Transferase(Phosphotransferase) domain 1 772 993 - -
Mch6g0858 994 FunFam Receptor-like protein kinase HSL1 672 771 - -
Mch6g0858 994 SUPERFAMILY RNI-like 295 634 - -
Mch6g0858 994 Pfam Leucine Rich Repeat 553 575 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 Pfam Leucine Rich Repeat 529 551 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 Pfam Leucine Rich Repeat 245 265 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 Pfam Leucine Rich Repeat 171 192 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 Pfam Leucine Rich Repeat 316 337 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 Pfam Leucine Rich Repeat 577 596 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 Pfam Leucine Rich Repeat 291 313 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 287 380 - -
Mch6g0858 994 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 283 - -
Mch6g0858 994 SMART LRR_typ_2 144 168 IPR003591 -
Mch6g0858 994 SMART LRR_typ_2 242 266 IPR003591 -
Mch6g0858 994 SMART LRR_typ_2 313 337 IPR003591 -
Mch6g0858 994 SMART LRR_typ_2 503 527 IPR003591 -
Mch6g0858 994 SMART LRR_typ_2 551 575 IPR003591 -
Mch6g0858 994 Gene3D Ribonuclease Inhibitor 459 525 IPR032675 -
Mch6g0858 994 Gene3D Ribonuclease Inhibitor 526 613 IPR032675 -
Mch6g0858 994 SUPERFAMILY RNI-like 64 356 - -
Mch6g0858 994 ProSiteProfiles Leucine-rich repeat profile. 529 552 IPR001611 GO:0005515(InterPro)
Mch6g0858 994 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524(InterPro)
Mch6g0858 994 Pfam Protein kinase domain 694 974 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0858 994 FunFam Kinase family with leucine-rich repeat domain-containing protein 772 993 - -
Mch6g0858 994 ProSiteProfiles Protein kinase domain profile. 692 992 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0858 994 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 381 625 - -
Mch6g0858 994 PRINTS Leucine-rich repeat signature 551 564 - -
Mch6g0858 994 PRINTS Leucine-rich repeat signature 530 543 - -
Mch6g0858 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0858 994 FunFam Receptor-like protein kinase HSL1 isoform A 32 183 - -
Mch6g0858 994 Gene3D Ribonuclease Inhibitor 186 289 IPR032675 -
Mch6g0858 994 Gene3D Ribonuclease Inhibitor 32 185 IPR032675 -
Mch6g0858 994 Gene3D Phosphorylase Kinase; domain 1 674 771 - -
Mch6g0858 994 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 976 IPR050647 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0858 Mch-Chr6:5960452 Mch8g0317 Mch-Chr8:2218238 3.26E-144 dispersed
Mch6g0858 Mch-Chr6:5960452 Mch4g0284 Mch-Chr4:1818025 1.55E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77482 PF00069 Pkinase 9.50E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0858 - - - 0.0