Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0903 ATGGAGATGGGTCGTCTGGATTTGGCTGGGAAAGTGGTGGTCGTCGCCATTAAAGCCACCTCCAAGGATGTTTCCAAGGCTGCTCTCGTTTGGGCCTTGACTCATGTGGTTCAGCCTGGAGATCATATTAAGCTCCTCGTCGTTATCCCTTCTCATCCTTCAAGTAAATGGATGCGGGGATTTTCCCGATTGACCGGCGACTGCACGATCGGTCATCTGAGAATTCCATCGGGAACCCTTTCAGATCAGAAGGATGACATTGTGCATTCTTGTTCTCAAATGGTAAATCAGCTTCATGGTGCATATGACCCACTGAAGATAAAAGTCAGGATCAAAGTTCTTTCAGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCAAACTGGGTCATATTGGATAAACAGTTGAAGGATGAAAGGAAAAACTGTTTGGAAGAACTGCAGTGCAATGTTGTTCTTATGAAGAAATCTCAACCGAAGGTTCTTCGTCTAAATTTGATGGATTCCCCGAAAATGAATACTAGACAAGCTTGGATATCATCACACGAATTAGAAGCTTCGCAGAAGTGTCTTAAAAGCTACTTCGATGAATCGACCATGTTCAGGGCTCCAGATATGACTCCTGCAAGTACTCCTGATGTAGAGTCTCCTCTTACCATAACTGATGTTGGAACATCGTCGATATCGAGCTCGGATGTGGGCAGTTCATCTGTGTTCTCTGGGATTTGTGGCAGCCTGAGAAATGAATCCAGAACAGCATCTGGAGGAGGGAGACATTTGTCTGGATCTGAATGTGATTCTGATAGCGAAAAGCAAACACCCTCAGTTTCATACTTCCATCGTTGTATGGTTGATATTCTAAGTTACAGGCGAAAATTCCTGCAACACACGATGGAAGAATCACAGAACGCTCATGGTAGACCTCCATCTTCAATACGCCAAGGTTTGGTCAAGAAAGCTTCGACTATTTCTCTAGAACCCAGCCCCGATGTGGTGAATCGAAATACCGATATGAGTTCAAGCAGAAACATAAGGAACACAGTTTTGTTATCGAGGAAAGCACCTCTAGGCCCTCCCCCGCTGTGTTCAATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCAGAACTCGAAGTTGCTACAAGTGGATTTGCACAAACAAATTTTCTGGCTGAGGGTGGATTTGGGTCTGTGCACCGTGGCATCTTACCAGATGGACAAGTCATTGCTGTCAAGCAATATAAACTGGCCAGTACTCAGGGAGATCGAGAATTTTGTTCGGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGGAATGTTGTGATGCTCATCGGATTTTGTGTGGAGGGCGGAAGAAGGTTGCTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCTCATCTTTATGGAAGAAATCGTGATCCTCTGAAATGGTCTGCACGACAGAAGATTGCGGTTGGAGCTGCTCGAGGTTTGAGATACCTTCATGAAGAGTGTAGAGTGGGCTGTATTGTGCACCGCGATATTCGCCCAAACAATATCCTCCTCACTCATGATTTTGAACCACTAGTTGGAGATTTTGGGCTGGCAAGGTGGCAGCCAGATGGTGATCTGGCAGTGGAAACTAGAATCCTTGGGAGATTTGGCTATCTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACAGAGAAGGCCGATACTTACTCGTTTGGCGTAGTCTTGCTGGAACTCGTGACTGGACGAAAAGCGATTGATTTAAATCGTCCCAAGGGCCAGCAGTGCCTCACCGAATGGGCAAAAAACCTGCTGCGAAAAGATGCCATCTCCGAACTGGTCGATCCGTGCTTGAGGAATTGTTATTCAGAAGAGGAAGTTCACCGTATGCTGCAATGCGCTTCCTTGTGCATCAAGCACGACCCGTATGTAAGACCACGTATGTCTCAGGTGCTTCGGGTTTTGGAGGGCGACATCGTTTTGTAA 2016 46.08 MEMGRLDLAGKVVVVAIKATSKDVSKAALVWALTHVVQPGDHIKLLVVIPSHPSSKWMRGFSRLTGDCTIGHLRIPSGTLSDQKDDIVHSCSQMVNQLHGAYDPLKIKVRIKVLSGLARGMVATEAKKAQSNWVILDKQLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMDSPKMNTRQAWISSHELEASQKCLKSYFDESTMFRAPDMTPASTPDVESPLTITDVGTSSISSSDVGSSSVFSGICGSLRNESRTASGGGRHLSGSECDSDSEKQTPSVSYFHRCMVDILSYRRKFLQHTMEESQNAHGRPPSSIRQGLVKKASTISLEPSPDVVNRNTDMSSSRNIRNTVLLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEVATSGFAQTNFLAEGGFGSVHRGILPDGQVIAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWAKNLLRKDAISELVDPCLRNCYSEEEVHRMLQCASLCIKHDPYVRPRMSQVLRVLEGDIVL 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6343844 6348076 + MC06g0763 Mch6g0903 690350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0903 671 ProSiteProfiles Protein kinase domain profile. 395 671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0903 671 SUPERFAMILY Protein kinase-like (PK-like) 378 663 IPR011009 -
Mch6g0903 671 Pfam Protein tyrosine and serine/threonine kinase 399 664 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0903 671 Gene3D Transferase(Phosphotransferase) domain 1 471 669 - -
Mch6g0903 671 PANTHER OS01G0750732 PROTEIN 156 666 IPR050885 -
Mch6g0903 671 CDD STKc_IRAK 401 667 - -
Mch6g0903 671 SMART tyrkin_6 395 665 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Mch6g0903 671 MobiDBLite consensus disorder prediction 253 276 - -
Mch6g0903 671 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0903 671 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Mch6g0903 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 367 470 - -
Mch6g0903 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 471 671 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0220 Mch-Chr11:1402084 Mch6g0903 Mch-Chr6:6343844 8.32E-170 dispersed
Mch4g1821 Mch-Chr4:21086977 Mch6g0903 Mch-Chr6:6343844 1.39E-82 dispersed
Mch6g0903 Mch-Chr6:6343844 Mch8g3147 Mch-Chr8:33763076 3.53E-98 dispersed
Mch10g1387 Mch-Chr10:12657361 Mch6g0903 Mch-Chr6:6343844 8.75E-08 transposed
Mch2g0990 Mch-Chr2:6691668 Mch6g0903 Mch-Chr6:6343844 5.75E-73 transposed
Mch6g0903 Mch-Chr6:6343844 Mch8g1248 Mch-Chr8:9005223 1.17E-279 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77484 PF07714 PK_Tyr_Ser-Thr 4.40E-41 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0903 - - - 0.0