Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0941 | ATGGAGAATCTTCAGGAGGTTGAAGAAGACGGGGAGGGACCCGCCGCCGTGGAGGATGAAGAAGTGGAAATCGGAATCGTGGGTTCCAGCTTGACTCTGGAGAAAGTCGCCGCGGCCAAACAGTACATCGAGAACCATTACAAGGCTCAAAAGAAGCACATTCAAGAGCGCAAGGAGAGGCGCTCTGTGCTAGAAAAGAAGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTTTTGAAGGACTTGGAGCGCACGGAGACTCATTACATGAGGCTGAAAAGGCATAAAATTTGTGTTGAAGATTTCGACCTTTTGACAATAATCGGGCGAGGTGCTTTTGGGGAGGTCAGACTTTGTCGGGAGAAGAAAACAGGCACTATATATGCCATGAAGAAGCTGAGGAAATCAGAAATGCTCAGCAGAGGACAGGTCGAACATGTCCGAGCTGAAAGGAATTTACTTGCAGAAGTTGCGAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATACCGAATACTTGTATCTGATTATGGAGTATCTTCCTGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACAGAAACCGTGGCTAGATTTTACGTGGCCCAAAGTGTTCTGGCAATAGAGTCAATTCATAAACATAACTACATCCACAGAGACATAAAACCTGATAACCTTCTGCTGGACAAAAGGGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTGTCTGCTATAAATGAAAATGAAGTCCTTGATGATGATAGCTTGCACGATACAGTCGACGTGGATGAGAGCTTCCCAGGTAAAAAAAGCGGGAGGCGCTGGAAGAGCCCTCTTGAACAACTTCAGCACTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACGGTTGGCACTCCAGATTACATAGCTCCAGAAGTGTTGCTAAAAAAAGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTAACAACATGCCGAAAGATTGTACATTGGAAAAATCACTTAAAATTCCCCGATGAGATAAGATTAACACCTGAAGCAAAAGATTTGATCAGTAGGCTGCTTTGTGATGCCGAGCATAGGCTCGGTACTGGAGGTGCAGACCAAATCAAGGCTCACCCTTGGTTCAAAGATACCGTCTGGGACAATCTCTATGAAATTGATGCAGCATTTAAGCCCGAGGTCAATGGGGAACTTGATACGCAAAATTTTATGCAATTTGATGAGGTTGATCCACCACCGACTAGAAGCGGATCTGGACCGATAAGGAAGATGATGTTGACTCCCAAGGATCTTAGTTTTGTTGGTTATACATACAAAAACTTTGAAGCTGTCAAAGGTTTACACCATTCATTTGATTTGAAGTCGAGCACCGGCCCGACACGGACTTCCTCTGTCGACTCTACTCAGAGTGACTCAGCATTGAACTACTCCACCACCTGCTCAACAGATGACAGGGAAGCAGCCATACTGGCATCATCAGGGGATGCTTTGTCACAGTAA | 1611 | 44.51 | MENLQEVEEDGEGPAAVEDEEVEIGIVGSSLTLEKVAAAKQYIENHYKAQKKHIQERKERRSVLEKKLASSDVSEEEQINLLKDLERTETHYMRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGTIYAMKKLRKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHKHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSAINENEVLDDDSLHDTVDVDESFPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLTPEAKDLISRLLCDAEHRLGTGGADQIKAHPWFKDTVWDNLYEIDAAFKPEVNGELDTQNFMQFDEVDPPPTRSGSGPIRKMMLTPKDLSFVGYTYKNFEAVKGLHHSFDLKSSTGPTRTSSVDSTQSDSALNYSTTCSTDDREAAILASSGDALSQ | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6647365 | 6655754 | + | MC06g0796 | Mch6g0941 | 690388 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0941 | 536 | CDD | MobB_NDR_LATS-like | 39 | 100 | - | - | |
Mch6g0941 | 536 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 224 | 236 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0941 | 536 | Gene3D | Transferase(Phosphotransferase) domain 1 | 189 | 254 | - | - | |
Mch6g0941 | 536 | Gene3D | Transferase(Phosphotransferase) domain 1 | 311 | 430 | - | - | |
Mch6g0941 | 536 | CDD | STKc_NDR_like | 103 | 476 | - | - | |
Mch6g0941 | 536 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 38 | 481 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Mch6g0941 | 536 | FunFam | Non-specific serine/threonine protein kinase | 431 | 441 | - | - | |
Mch6g0941 | 536 | FunFam | Non-specific serine/threonine protein kinase | 311 | 430 | - | - | |
Mch6g0941 | 536 | FunFam | Non-specific serine/threonine protein kinase | 189 | 256 | - | - | |
Mch6g0941 | 536 | FunFam | Non-specific serine/threonine protein kinase | 66 | 188 | - | - | |
Mch6g0941 | 536 | Pfam | Protein kinase domain | 107 | 254 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0941 | 536 | Pfam | Protein kinase domain | 305 | 412 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0941 | 536 | SUPERFAMILY | Protein kinase-like (PK-like) | 87 | 464 | IPR011009 | - | |
Mch6g0941 | 536 | MobiDBLite | consensus disorder prediction | 490 | 515 | - | - | |
Mch6g0941 | 536 | ProSitePatterns | Protein kinases ATP-binding region signature. | 111 | 134 | IPR017441 | GO:0005524(InterPro) | |
Mch6g0941 | 536 | MobiDBLite | consensus disorder prediction | 489 | 515 | - | - | |
Mch6g0941 | 536 | ProSiteProfiles | Protein kinase domain profile. | 105 | 412 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0941 | 536 | Gene3D | Phosphorylase Kinase; domain 1 | 103 | 188 | - | - | |
Mch6g0941 | 536 | Gene3D | Phosphorylase Kinase; domain 1 | 431 | 441 | - | - | |
Mch6g0941 | 536 | SMART | pkinase_C_6 | 413 | 477 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0941 | 536 | SMART | serkin_6 | 105 | 412 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0941 | 536 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 413 | 485 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0941 | 536 | Pfam | Protein kinase C terminal domain | 431 | 475 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0191 | Mch-Chr6:1276298 | Mch6g0941 | Mch-Chr6:6647365 | 1.03E-59 | dispersed | |
Mch6g0941 | Mch-Chr6:6647365 | Mch7g0952 | Mch-Chr7:13933984 | 3.35E-229 | dispersed | |
Mch6g0941 | Mch-Chr6:6647365 | Mch6g0943 | Mch-Chr6:6672508 | 9.15E-17 | proximal | |
Mch9g0976 | Mch-Chr9:8135716 | Mch6g0941 | Mch-Chr6:6647365 | 1.78E-223 | transposed | |
Mch11g0433 | Mch-Chr11:2716606 | Mch6g0941 | Mch-Chr6:6647365 | 2.67E-283 | wgd | |
Mch6g0941 | Mch-Chr6:6647365 | Mch8g3227 | Mch-Chr8:34329790 | 3.43E-19 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77486 | PF00069 | Pkinase | 1.10E-42 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g0941 | K08790 | - | csv:101208238 | 949.118 |