Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0943 | ATGAGGAAGGGAGGCTTCAGCACCAACCTCAAGCTCAATCTCCCCCAGGAAGACCAATCCATAGCCAAGTTCCTAACGCAGAGTGGCACGTTTAGGGATGGTGATCTGCTTGTAAACAGAGATGGGGTTCGGATTGTTTCTCAGAGCGAAGTTGAGGCACCACCTCCGATTAAGCCTACCGATGATCAGTTGAGTTTAGCAGACATAGACATAATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTAAAGGTAATTCAGATGAAAATTGAGGAATCTCACCGCAAGCAGATTGCTCAAGAACTGAAAATCAATCAATCGGCACAGTGTCCCTATATTGTTATCTGTTACCAATCTTTTTATGATAATGGGTCTATATATATCATCCTAGAGTACATGGATGGGGGATCTTTAGCAGATTTTCTGAAAAAGGTTAAAAAGATTCAAGAACCATATCTTGCTGCCATTTGTAAGCAGGTGCTCAAGGGGCTGTTGTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAGCCGTCTAACTTGTTAATAAATCATAGAGGGGAAGTTAAGATTACTGACTTTGGTGTCAGTGCGATTATGGCAAGCACATCTGGAGAGGCTAATACTTTCGTTGGCACGTATAACTATATGTCTCCAGAGAGAATTGTCGGAGCAAGATATGACAACAAAAGCGACATTTGGTGCTTGGGGCTGATATTACTTGAGTGTGCAACCGGCAAATTCCCTTATTCTCCACCAGGGCAAGATGGAGGATGGGTTAACTTTTATGAGCTTATGGAAGCCATTGTCGAGGGTGAACCTCCGTCTGCTCCATCTGACCAATTTACTCCCAACTTCTGTGCGTTCATTTCTGCATGTGTGCAACAAGACCCAAAAGTTAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAAGATACGGCTATTGACCTGTCATCTTACTTCAATGATGCAGGATCTCCACTTGCAACTTTTTAA | 1062 | 42.47 | MRKGGFSTNLKLNLPQEDQSIAKFLTQSGTFRDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVICYQSFYDNGSIYIILEYMDGGSLADFLKKVKKIQEPYLAAICKQVLKGLLYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGEANTFVGTYNYMSPERIVGARYDNKSDIWCLGLILLECATGKFPYSPPGQDGGWVNFYELMEAIVEGEPPSAPSDQFTPNFCAFISACVQQDPKVRLSARELLEHPFIKMYEDTAIDLSSYFNDAGSPLATF | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6672508 | 6677115 | - | MC06g0798 | Mch6g0943 | 690390 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0943 | 353 | Pfam | Protein kinase domain | 71 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0943 | 353 | ProSiteProfiles | Protein kinase domain profile. | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0943 | 353 | SMART | serkin_6 | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0943 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 53 | 334 | IPR011009 | - | |
Mch6g0943 | 353 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0943 | 353 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 16 | 348 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Mch6g0943 | 353 | FunFam | Mitogen-activated protein kinase kinase 6 | 150 | 348 | - | - | |
Mch6g0943 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 349 | - | - | |
Mch6g0943 | 353 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524(InterPro) | |
Mch6g0943 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 45 | 148 | - | - | |
Mch6g0943 | 353 | CDD | PKc_MAPKK_plant_like | 67 | 333 | - | - | |
Mch6g0943 | 353 | FunFam | Mitogen-activated protein kinase kinase 6 | 39 | 148 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0943 | Mch-Chr6:6672508 | Mch8g3227 | Mch-Chr8:34329790 | 2.47E-183 | dispersed | |
Mch6g0941 | Mch-Chr6:6647365 | Mch6g0943 | Mch-Chr6:6672508 | 9.15E-17 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77487 | PF00069 | Pkinase | 1.50E-69 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g0943 | K20603 | - | csv:101204545 | 668.692 |