Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0950 ATGGCCACCCGTGAATTTTTCTGCTCCTCAGCTCTCTCAGGAGCCGATTCCATTCATCAATCTAAATCTTTCCCCTCTGTTTCAGCCTCCGATCATTGGGTCAAGGCTGCCGACGCCCTCCGTTGCCCCCATTTTGAGGAGGTCCGACGAATGGTGTCGGAGTTTCAGGAGGCTAAGACTGTTGACATTGAAGGCACCACCCTCACTGTTGCTCAGGTCACCGCGATTGCTCGCCGGAGTGACGTCAAAGTTAACCTCAATGAAGCCGTGGCTCGTGATCGTGTGGCCAAAAGTGCTAACTGGGTTGCTGAAAACATCTCTCGGGGAACAGACACATATGGAGTTACTACCGGCTTTGGCGCCACCTCCCACCGGCGTACCACCAAAACGGCCGACCTCCAGACGGAGCTTATTCGATTCCTCAACGCTGGAGTCATCGGAAAGGACAATCTCCCGTCGATCTACTCAAAGGCGGCCATGCTTGTTAGAACAAACACTTTGATGCAAGGCTACTCGGGCATTCGCTGGGAAATCCTTGAAGCTGTGGTGAAGCTCATGAATGAGAATTTGATCCCCAAATTGCCTTTGAGAGGTACAATCACAGCTTCCGGCGATCTGGTTCCACTGTCTTATATCGCTGGCGTTATCACCGGAAGGCATAATTCCAAGGTCACCACAATTGAAGGCGAAGAGGTAACCGCCATGCAAGCTCTGAAGAGAGCTGGAGTTGCAGGCCCATTTGAGCTTCAAGCAAAGGAAGGTTTAGCTCTCGTCAATGGAACCGCGGTTGGGTCCGCAGTCGCTGCCACAGTCTGCTTCGACGCCAACATTTTGGCTCTATTAGCCGTCGTTCTCTCTGCTATGTTCTGCGAAGCCATGCTCGGCAAGCCGGAATTTGCAGACCCACTAACCCATAAGCTCAAGCACCACCCTGGCCAGATTGAATCCGCCGCCGCCATGGAGTTCCTCTTGGATCAGAGCGACTTCATGAAAGAAGCAAAAACCCGACATGAAAAGGACCCACTGACAAAGCCAAAACAAGATCGCTATGCACTTCGAACTTCCCCCCAATGGCTTGGCCCACAAATTGAAGTCATTCGAACGGCAACCCATTCGATTGAAAGGGAAATCAACTCCGTAAACGATAATCCTTTAATTGATGTCCATCGGGACCTCGCTCTCCACGGAGGAAACTTCCAGGGGACCCCAATCGGTGTCTCCATGGACAATCTCCGGATCGCCATCGCTGCAATCGGAAAATTAATGTTCGCCCAATTCTCTGAACTCGTCTGCGATCATTACAATAATGGATTGCCGTCTAATTTGAGCGGCGGGCCAAATCCAAGCTTGGACTACGGCTTTAAAGGAGCGGAAATCGCCATGGCTGCTTACTGCTCTGAGCTTCAATACTTGGCAAACCCTGTCACGACCCACGTCCAGAGCGCAGAACAACACAATCAGGATGTAAACTCTCTAGGTTTAATCTCAGCCAGAAAATCCGCCGAAGCGATCGAGATTCTCAAGCTCATGTCCGCTACCTACATGGTGGCGCTCTGCCAGGCGATAGATTTGAGACAACACGAGGAGAATATGAGGGAAGTCGTGAAGAATGCTCTTCTACAAGCCGTCAGAAAAACCCTATACGTCGCCGAAGATGGATCCCTTCTCGAATCGCGATTCTGCGAGAAAGATCTTCTGCAAGTAATCGAGCACGAGGCGGTGTTCTCCTACATCGACGATCCCACGAACACCTCCTACGCCCTAATCCCCAAATTGCTGGAAGTTCTTGTCGAAAGAGCGCTGAAAGGCGCCTCAGCGGACAAGGGCGAGCATGGAAATGAAACAGGCGTCACCATCTTCAGGCGAATCCCGGGGTTTTTGGAGGAATTGAAGGCGAAATTGGAAGAAGAGGTGGAAAGCGCGAGAGGGAGATTTGAGAACGGGGATTTCGCAGTGGAAAACAGAATCAAGAAATGCAGTACTTACCCGATCTATCATTTCGTGAGGACGGAAGTGGGGACTCAGCTGCTCAGTGGGGCGAAGAGGGTGAGCCCTGGAGAAGATATAGAGAAAGTTGTGGACGCCATTAATGGAGGTAAAATTGGAGAAGTTGTGACCAAGTGTTTGAAAAAT 2133 51.01 MATREFFCSSALSGADSIHQSKSFPSVSASDHWVKAADALRCPHFEEVRRMVSEFQEAKTVDIEGTTLTVAQVTAIARRSDVKVNLNEAVARDRVAKSANWVAENISRGTDTYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIGKDNLPSIYSKAAMLVRTNTLMQGYSGIRWEILEAVVKLMNENLIPKLPLRGTITASGDLVPLSYIAGVITGRHNSKVTTIEGEEVTAMQALKRAGVAGPFELQAKEGLALVNGTAVGSAVAATVCFDANILALLAVVLSAMFCEAMLGKPEFADPLTHKLKHHPGQIESAAAMEFLLDQSDFMKEAKTRHEKDPLTKPKQDRYALRTSPQWLGPQIEVIRTATHSIEREINSVNDNPLIDVHRDLALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDHYNNGLPSNLSGGPNPSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMSATYMVALCQAIDLRQHEENMREVVKNALLQAVRKTLYVAEDGSLLESRFCEKDLLQVIEHEAVFSYIDDPTNTSYALIPKLLEVLVERALKGASADKGEHGNETGVTIFRRIPGFLEELKAKLEEEVESARGRFENGDFAVENRIKKCSTYPIYHFVRTEVGTQLLSGAKRVSPGEDIEKVVDAINGGKIGEVVTKCLKN 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6730339 6732471 - MC06g0805 Mch6g0950 690397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0950 711 NCBIfam phenylalanine ammonia-lyase 31 710 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Mch6g0950 711 CDD PAL-HAL 66 525 IPR001106 -
Mch6g0950 711 PANTHER HISTIDINE AMMONIA-LYASE 29 711 IPR001106 GO:0016841(PANTHER)
Mch6g0950 711 SUPERFAMILY L-aspartase-like 32 710 IPR008948 GO:0003824(InterPro)
Mch6g0950 711 Gene3D - 528 654 IPR023144 -
Mch6g0950 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841(InterPro)
Mch6g0950 711 Gene3D - 22 261 IPR024083 -
Mch6g0950 711 Pfam Aromatic amino acid lyase 68 544 IPR001106 -
Mch6g0950 711 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0341 Mch-Chr2:2518239 Mch6g0950 Mch-Chr6:6730339 4.24E-169 dispersed
Mch4g2047 Mch-Chr4:22712733 Mch6g0950 Mch-Chr6:6730339 2.88E-25 dispersed
Mch6g0950 Mch-Chr6:6730339 Mch9g1792 Mch-Chr9:19796163 1.45E-280 dispersed
Mch6g0950 Mch-Chr6:6730339 Mch1g0817 Mch-Chr1:11724681 1.85E-292 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0950 K10775 - csv:101205510 1185.24