Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0980 | ATGGGGGCCATAGATCGATTACTCATCGCTTCCCTTCTTCTTCTTCTTCCTTGTGTCTTCGTCGATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTGCCTTCTGATTACCTCACCCACCATGACTGGTACTCTGCCAATCTTCAATCTCTCTCCTCCTCCACCACCTCCGATTCCCTTCTCTACACCTACACCGCCGCCTACCATGGCTTCGCAGCTTCTTTAGATCCAGAAGAAGCCGAATTGCTCCGCCAATCCGATTCAGTTCTGGGTGTCTATGAAGACACTGTTTACAACCTCCACACCACTCGCACTCCGGGGTTCCTCGGCCTTGACTCCGATTTCGGCTTATGGGAAGGTCACAACACTCAGGATCTTGACCAGGCCTCCCACGATGTCATCATTGGGGTCCTCGACACTGGGATTTGGCCGGAATCGAAGAGCTTCGATGACACCGGTATGCCGGAGATCCCATCACGGTGGCGCGGAGAATGCGAATCGGGACCCGATTTCAGCCCTTCGCTATGCAACAAGAAATTAATCGGAGCTCGTAGCTTCTCCAAAGGTTATCAGATGGCCTCCGGTGGTGGATACTTCAGAAAACCCAGAGAGAATCAGTCGCCTCGAGACCAGGACGGGCACGGCACGCACACGGCGAGCACGGCCGCTGGCTCACACGTGGCTAACGCGAGCTTACTCGGGTATGCCAGAGGCATTGCCCGTGGGATGGCTCCTCAAGCGCGAGTTGCCGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTTTAGCGGGTATGGATCGGGCGATATCAGACGGCGTCGATGTGCTCTCGCTCTCCTTAGGCGGTGGCTCGGCGCCGTACTACCGTGATACCATCGCAATTGGGGCATTTGCGGCCATGGAGAAGGGGGTTTTCGTTTCGTGCTCGGCCGGGAACAGTGGGCCAAACAGGGCTTCCCTGGCCAATGTGGCGCCGTGGATCATGACGGTCGGAGCCGGAACTCTCGACCGGGACTTTCCGGCTTATGTCCAATTGGGAAACGGCAAACGGTTCACCGGAGTGTCGCTCTACAGCGGCCAAGGGATGGGGAATAAGCCAGTGGAGTTGGTGTATGACAAAGGAAGCAATACATCCAGTAACATGTGCTTGCCCGGATCTCTGGAGCCGGCGGTGGTCCGGGGGAAGGTGGTGATCTGCGACAGAGGAATCAATGCCAGAGTAGAGAAGGGAGGGGTGGTGCGGGATGCAGGTGGCATAGGGATGATTCTGGCGAACACCGCCGCAAGTGGGGAGGAATTGGTGGCGGACAGCCACTTGCTGCCGGCCGTCGCGGTGGGGAGAAAAACCGGCGACTTGATCCGGCAGTATGTGAAGTCAGTTACAAAGCCGACGGCGGTGCTGAGCTTTGGTGGGACGGTTTTGAATGTGCGGCCATCTCCAGTGGTGGCAGCCTTCAGTTCCAGAGGACCCAACTTGGTAACGCCCCAAATCCTGAAGCCAGACGTTATTGGGCCTGGCGTTAACATTTTGGCCGCCTGGTCTGAGTCCATTGGGCCTACTGGATTGGACAGCGACAAGAGGAAAACCCAGTTCAATATTATGTCAGGAACATCCATGTCCTGCCCTCATATAAGTGGGCTGGCGGCATTGCTGAAGGCAGCTCATCCGCAATGGAGTCCTAGTGCTATCAAATCTGCGTTGATGACCACTGCATACACGCAGGACAACACCAACTCATCTCTCCGGGACGCTGCCGGAGGGGCATTTTCCAATCCGTGGGCTCATGGAGCTGGCCATGTTGATCCCCACAAGGCCCTATCCCCCGGTCTCCTGTACGATATCTCGACCGAGGATTACATTGCCTTTTTGTGCTCTTTGGACTATGGTATTGACCATGTTCAGGCTATCGTGAAGCGCCCGAACATAACCTGCTCCAGAAAGTTTGCTGACCCAGGACAACTCAACTACCCGTCGTTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGATACACTCGAATAGTCACAAATGTAGGGGCTGCAGGCTCGGTTTACGAAGTGGCTACAACTGCACCTTCAGTTGTGAAGGTGGTGGTGAAACCTACAAAGCTTGCATTCACTAAAGTTGGGGAGAGGAAGAGATATACTGTTACATTCGTGGCAAGCAGCAATGCAGCTCAAACCACGAGATTCGGGTTTGGATCGATTGCATGGAGCAACGACCAACACCAAGTCAGAAGCCCGGTGGCATTCGCCTGGACGAGGTTGTGA | 2292 | 54.84 | MGAIDRLLIASLLLLLPCVFVDAKRTYIVRMKHHALPSDYLTHHDWYSANLQSLSSSTTSDSLLYTYTAAYHGFAASLDPEEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENQSPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNRASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVELVYDKGSNTSSNMCLPGSLEPAVVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVKSVTKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLLYDISTEDYIAFLCSLDYGIDHVQAIVKRPNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVVVKPTKLAFTKVGERKRYTVTFVASSNAAQTTRFGFGSIAWSNDQHQVRSPVAFAWTRL | 763 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6922850 | 6927329 | + | MC06g0831 | Mch6g0980 | 690427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0980 | 763 | Pfam | Peptidase inhibitor I9 | 26 | 104 | IPR010259 | - | |
Mch6g0980 | 763 | Gene3D | - | 343 | 481 | - | - | |
Mch6g0980 | 763 | Gene3D | Peptidase S8/S53 domain | 135 | 626 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Mch6g0980 | 763 | SUPERFAMILY | Subtilisin-like | 103 | 617 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Mch6g0980 | 763 | Pfam | PA domain | 375 | 459 | IPR003137 | - | |
Mch6g0980 | 763 | FunFam | Subtilisin-like protease SBT1.9 | 18 | 104 | - | - | |
Mch6g0980 | 763 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 21 | 104 | IPR037045 | - | |
Mch6g0980 | 763 | CDD | PA_subtilisin_like | 349 | 472 | - | - | |
Mch6g0980 | 763 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 26 | 756 | IPR045051 | - | |
Mch6g0980 | 763 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 117 | 613 | - | - | |
Mch6g0980 | 763 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
Mch6g0980 | 763 | PRINTS | Subtilisin serine protease family (S8) signature | 213 | 226 | IPR015500 | - | |
Mch6g0980 | 763 | PRINTS | Subtilisin serine protease family (S8) signature | 542 | 558 | IPR015500 | - | |
Mch6g0980 | 763 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 543 | 553 | IPR023828 | - | |
Mch6g0980 | 763 | FunFam | subtilisin-like protease SBT1.5 | 343 | 481 | - | - | |
Mch6g0980 | 763 | CDD | Peptidases_S8_3 | 101 | 579 | IPR034197 | - | |
Mch6g0980 | 763 | FunFam | Subtilisin-like protease SBT1.5 | 135 | 354 | - | - | |
Mch6g0980 | 763 | SUPERFAMILY | Protease propeptides/inhibitors | 26 | 102 | - | - | |
Mch6g0980 | 763 | Pfam | Fibronectin type-III domain | 660 | 757 | IPR041469 | - | |
Mch6g0980 | 763 | MobiDBLite | consensus disorder prediction | 200 | 224 | - | - | |
Mch6g0980 | 763 | Gene3D | - | 630 | 760 | - | - | |
Mch6g0980 | 763 | Pfam | Subtilase family | 134 | 583 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Mch6g0980 | 763 | FunFam | Subtilisin-like protease SBT1.5 | 630 | 761 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g1263 | Mch-Chr1:14859196 | Mch6g0980 | Mch-Chr6:6922850 | 2.66E-284 | dispersed | |
Mch4g0363 | Mch-Chr4:2285821 | Mch6g0980 | Mch-Chr6:6922850 | 7.92E-193 | dispersed | |
Mch6g0980 | Mch-Chr6:6922850 | Mch8g0642 | Mch-Chr8:4628931 | 4.30E-271 | dispersed | |
Mch6g2849 | Mch-Chr6:29711547 | Mch6g0980 | Mch-Chr6:6922850 | 2.25E-215 | transposed | |
Mch8g0675 | Mch-Chr8:4802633 | Mch6g0980 | Mch-Chr6:6922850 | 1.40E-162 | transposed | |
Mch6g0980 | Mch-Chr6:6922850 | Mch9g0211 | Mch-Chr9:1607613 | 3.36E-256 | wgd |
Pathway information
