Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0980 ATGGGGGCCATAGATCGATTACTCATCGCTTCCCTTCTTCTTCTTCTTCCTTGTGTCTTCGTCGATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTGCCTTCTGATTACCTCACCCACCATGACTGGTACTCTGCCAATCTTCAATCTCTCTCCTCCTCCACCACCTCCGATTCCCTTCTCTACACCTACACCGCCGCCTACCATGGCTTCGCAGCTTCTTTAGATCCAGAAGAAGCCGAATTGCTCCGCCAATCCGATTCAGTTCTGGGTGTCTATGAAGACACTGTTTACAACCTCCACACCACTCGCACTCCGGGGTTCCTCGGCCTTGACTCCGATTTCGGCTTATGGGAAGGTCACAACACTCAGGATCTTGACCAGGCCTCCCACGATGTCATCATTGGGGTCCTCGACACTGGGATTTGGCCGGAATCGAAGAGCTTCGATGACACCGGTATGCCGGAGATCCCATCACGGTGGCGCGGAGAATGCGAATCGGGACCCGATTTCAGCCCTTCGCTATGCAACAAGAAATTAATCGGAGCTCGTAGCTTCTCCAAAGGTTATCAGATGGCCTCCGGTGGTGGATACTTCAGAAAACCCAGAGAGAATCAGTCGCCTCGAGACCAGGACGGGCACGGCACGCACACGGCGAGCACGGCCGCTGGCTCACACGTGGCTAACGCGAGCTTACTCGGGTATGCCAGAGGCATTGCCCGTGGGATGGCTCCTCAAGCGCGAGTTGCCGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTTTAGCGGGTATGGATCGGGCGATATCAGACGGCGTCGATGTGCTCTCGCTCTCCTTAGGCGGTGGCTCGGCGCCGTACTACCGTGATACCATCGCAATTGGGGCATTTGCGGCCATGGAGAAGGGGGTTTTCGTTTCGTGCTCGGCCGGGAACAGTGGGCCAAACAGGGCTTCCCTGGCCAATGTGGCGCCGTGGATCATGACGGTCGGAGCCGGAACTCTCGACCGGGACTTTCCGGCTTATGTCCAATTGGGAAACGGCAAACGGTTCACCGGAGTGTCGCTCTACAGCGGCCAAGGGATGGGGAATAAGCCAGTGGAGTTGGTGTATGACAAAGGAAGCAATACATCCAGTAACATGTGCTTGCCCGGATCTCTGGAGCCGGCGGTGGTCCGGGGGAAGGTGGTGATCTGCGACAGAGGAATCAATGCCAGAGTAGAGAAGGGAGGGGTGGTGCGGGATGCAGGTGGCATAGGGATGATTCTGGCGAACACCGCCGCAAGTGGGGAGGAATTGGTGGCGGACAGCCACTTGCTGCCGGCCGTCGCGGTGGGGAGAAAAACCGGCGACTTGATCCGGCAGTATGTGAAGTCAGTTACAAAGCCGACGGCGGTGCTGAGCTTTGGTGGGACGGTTTTGAATGTGCGGCCATCTCCAGTGGTGGCAGCCTTCAGTTCCAGAGGACCCAACTTGGTAACGCCCCAAATCCTGAAGCCAGACGTTATTGGGCCTGGCGTTAACATTTTGGCCGCCTGGTCTGAGTCCATTGGGCCTACTGGATTGGACAGCGACAAGAGGAAAACCCAGTTCAATATTATGTCAGGAACATCCATGTCCTGCCCTCATATAAGTGGGCTGGCGGCATTGCTGAAGGCAGCTCATCCGCAATGGAGTCCTAGTGCTATCAAATCTGCGTTGATGACCACTGCATACACGCAGGACAACACCAACTCATCTCTCCGGGACGCTGCCGGAGGGGCATTTTCCAATCCGTGGGCTCATGGAGCTGGCCATGTTGATCCCCACAAGGCCCTATCCCCCGGTCTCCTGTACGATATCTCGACCGAGGATTACATTGCCTTTTTGTGCTCTTTGGACTATGGTATTGACCATGTTCAGGCTATCGTGAAGCGCCCGAACATAACCTGCTCCAGAAAGTTTGCTGACCCAGGACAACTCAACTACCCGTCGTTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGATACACTCGAATAGTCACAAATGTAGGGGCTGCAGGCTCGGTTTACGAAGTGGCTACAACTGCACCTTCAGTTGTGAAGGTGGTGGTGAAACCTACAAAGCTTGCATTCACTAAAGTTGGGGAGAGGAAGAGATATACTGTTACATTCGTGGCAAGCAGCAATGCAGCTCAAACCACGAGATTCGGGTTTGGATCGATTGCATGGAGCAACGACCAACACCAAGTCAGAAGCCCGGTGGCATTCGCCTGGACGAGGTTGTGA 2292 54.84 MGAIDRLLIASLLLLLPCVFVDAKRTYIVRMKHHALPSDYLTHHDWYSANLQSLSSSTTSDSLLYTYTAAYHGFAASLDPEEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENQSPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNRASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVELVYDKGSNTSSNMCLPGSLEPAVVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVKSVTKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLLYDISTEDYIAFLCSLDYGIDHVQAIVKRPNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVVVKPTKLAFTKVGERKRYTVTFVASSNAAQTTRFGFGSIAWSNDQHQVRSPVAFAWTRL 763
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 6922850 6927329 + MC06g0831 Mch6g0980 690427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0980 763 Pfam Peptidase inhibitor I9 26 104 IPR010259 -
Mch6g0980 763 Gene3D - 343 481 - -
Mch6g0980 763 Gene3D Peptidase S8/S53 domain 135 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch6g0980 763 SUPERFAMILY Subtilisin-like 103 617 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch6g0980 763 Pfam PA domain 375 459 IPR003137 -
Mch6g0980 763 FunFam Subtilisin-like protease SBT1.9 18 104 - -
Mch6g0980 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 104 IPR037045 -
Mch6g0980 763 CDD PA_subtilisin_like 349 472 - -
Mch6g0980 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 756 IPR045051 -
Mch6g0980 763 ProSiteProfiles Serine proteases, subtilase domain profile. 117 613 - -
Mch6g0980 763 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Mch6g0980 763 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Mch6g0980 763 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Mch6g0980 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Mch6g0980 763 FunFam subtilisin-like protease SBT1.5 343 481 - -
Mch6g0980 763 CDD Peptidases_S8_3 101 579 IPR034197 -
Mch6g0980 763 FunFam Subtilisin-like protease SBT1.5 135 354 - -
Mch6g0980 763 SUPERFAMILY Protease propeptides/inhibitors 26 102 - -
Mch6g0980 763 Pfam Fibronectin type-III domain 660 757 IPR041469 -
Mch6g0980 763 MobiDBLite consensus disorder prediction 200 224 - -
Mch6g0980 763 Gene3D - 630 760 - -
Mch6g0980 763 Pfam Subtilase family 134 583 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch6g0980 763 FunFam Subtilisin-like protease SBT1.5 630 761 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1263 Mch-Chr1:14859196 Mch6g0980 Mch-Chr6:6922850 2.66E-284 dispersed
Mch4g0363 Mch-Chr4:2285821 Mch6g0980 Mch-Chr6:6922850 7.92E-193 dispersed
Mch6g0980 Mch-Chr6:6922850 Mch8g0642 Mch-Chr8:4628931 4.30E-271 dispersed
Mch6g2849 Mch-Chr6:29711547 Mch6g0980 Mch-Chr6:6922850 2.25E-215 transposed
Mch8g0675 Mch-Chr8:4802633 Mch6g0980 Mch-Chr6:6922850 1.40E-162 transposed
Mch6g0980 Mch-Chr6:6922850 Mch9g0211 Mch-Chr9:1607613 3.36E-256 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0980 - - - 0.0