Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0986 ATGGCCACGGATTCGAGCAATGGCGGCGATGTCGGAGCGGATAACTCTCTCCAGGCCATCTGCTACAATCGCGGCTCGCTGCGGCTGCTCGATCAGAGGAAGCTCCCTCTGGAAACTGTTTACCTGGACATCAAGAACGCAGCAGATGGATGGCACGCAATAAGGGATATGGTAGTTCGCGGGGCACCCGCCATTGCTATTGCAGCAGCCCTTGCTTTGGCAGTAGAAGTGCATAACTCGGGCACTTTTAACGGGACGTCCAACGATGCAGCTTCCTTTATTGCGGAGAAACTGGACTACTTAGTCTCCAGCCGACCTACTGCTGTTAATCTTGCCGATGCTGCCATAAAACTTAAAGAAATTGTATCAGGGGCCGTTGCTGTTTCTTCTGAAGCCCGGAGTGTCTACCAAGCATATATAGAGGCTTCGGAAGCAATGTTGGACGATGATGTTGCTTCAAATAAAGCCATTGGGTCCTATGGAGCAACTTATATCCGCGAACAACAAAAATCCTTGGAGAAGTTTTCTGTTCTAACGCATTGCAACACTGGCAGTCTAGCAACGGCTGGATATGGTACTGCCCTTGGTGTAATTCGTGCACTTCACTCTGCCGGTGTGTTAGAAAGGGCATACTGTACCGAAACACGGCCATTCAATCAAGGATCTCGACTCACAGCCTATGAGTTGGTCCATGAAAAGATACCTGCTACTCTGATAGCAGATTCAGCTGCAGCTGCCTTGATGAAGTTTGGAAGGGTGAATGCCATTGTTGTTGGGGCTGATCGCGTTGCTGCAAATGGTGATACTGCAAATAAGATCGGAACCTATAGTCTTGCATTGTGTGCAAAGCATCACAAGGTTCCATTTTTTGTGGCTGCACCATTGACTTCCGTAGACTTAACCCTTTCATCTGGAGAAGAAATAGTTATCGAGGAGAGATCTCCCAAAGAGTTGCTGAATTCGCGTGGAGGTCTCGGGGAGCAAGTTGCTGCATCCGGTATCGCTGTTTGGAACCCTGCTTTCGATGTCACTCCTGCCCATCTGATCTCTGGAATCATAACAGAAAAGGGAGTCATCACAAAGGGAGATTCTGAATCTTTCAACATCAACGATTTTGTAAAAAAGACAGCGGGGACCTGTGCGTAA 1146 48.43 MATDSSNGGDVGADNSLQAICYNRGSLRLLDQRKLPLETVYLDIKNAADGWHAIRDMVVRGAPAIAIAAALALAVEVHNSGTFNGTSNDAASFIAEKLDYLVSSRPTAVNLADAAIKLKEIVSGAVAVSSEARSVYQAYIEASEAMLDDDVASNKAIGSYGATYIREQQKSLEKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYCTETRPFNQGSRLTAYELVHEKIPATLIADSAAAALMKFGRVNAIVVGADRVAANGDTANKIGTYSLALCAKHHKVPFFVAAPLTSVDLTLSSGEEIVIEERSPKELLNSRGGLGEQVAASGIAVWNPAFDVTPAHLISGIITEKGVITKGDSESFNINDFVKKTAGTCA 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6939971 6946151 - MC06g0836 Mch6g0986 690433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0986 381 Gene3D - 15 207 IPR027363 -
Mch6g0986 381 FunFam Methylthioribose-1-phosphate isomerase 173 370 - -
Mch6g0986 381 Pfam Initiation factor 2 subunit family 59 360 IPR000649 GO:0044237(InterPro)
Mch6g0986 381 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 14 375 - GO:0019509(PANTHER)|GO:0046523(PANTHER)
Mch6g0986 381 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 18 361 IPR005251 -
Mch6g0986 381 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 17 370 IPR005251 -
Mch6g0986 381 FunFam Methylthioribose-1-phosphate isomerase 15 207 - -
Mch6g0986 381 Gene3D - 208 373 IPR042529 -
Mch6g0986 381 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 44 361 IPR011559 GO:0044249(InterPro)
Mch6g0986 381 SUPERFAMILY NagB/RpiA/CoA transferase-like 16 363 IPR037171 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0986 K08963 - csv:101210526 643.269