Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0991 | ATGGCCCTCTCCATTGCTTCCACTGCGCTCTCAGTCTCAACCCTCCCAATCAGAGAATCCCACACCAGACATTTTCCCGGAAAATTCACAAAACACCTCCGCCGAGACTATTCCCATTTGAACGCCGCCAAATCCGGCGTCTCCAGCGTCTGCGAACCGCTCCCTCCCGACAGACCTCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGTGATTTTGGCTTCGACCCCCTTGGATTGGGTTCTGATCCAGAGCTGCTGAAATGGTTCGCACAGGCGGAGCTGATGCACGCCAGATGGGCGATGCTGGCGGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAGAGCCTGGGATTGATCGAGAATTTCTCGTGGTACGACGCCGGAACCCGGGAATATTTCGCGGACCCGACGACGTTGTTGGTGGCGCAATTGGGTCTAATGGGGTGGGCGGAGGGGCGGCGGTGGGCGGACATGGTCAACCCGGGGAGCGTGGACGTTGACCTGAAACTGCCACACAAGAAGAAGCCGGCGCCGGACGTGGGCTACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTCATGGTGCTCCGTACCAAGGAGATTAAGAACGGCCGCCTCGCCATGCTGGCGTTCGTCGGACTGTGGTTTCAGGCCATTTATACCGGCCAAGGCCCGCTCGAGAATCTGGCGGCGCACCTCGCCGATCCCGGCCACTGCAACATTTTTTCGGCGTTTAGATCGGGTTGA | 792 | 61.24 | MALSIASTALSVSTLPIRESHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFSAFRSG | 263 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6967593 | 6969287 | - | MC06g0841 | Mch6g0991 | 690438 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0991 | 263 | Gene3D | Chlorophyll a/b binding protein domain | 68 | 253 | - | - | |
Mch6g0991 | 263 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 44 | 257 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Mch6g0991 | 263 | SUPERFAMILY | Chlorophyll a-b binding protein | 57 | 260 | - | - | |
Mch6g0991 | 263 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 68 | 253 | - | - | |
Mch6g0991 | 263 | Pfam | Chlorophyll A-B binding protein | 67 | 233 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0991 | Mch-Chr6:6967593 | Mch9g2370 | Mch-Chr9:23612786 | 2.10E-107 | dispersed | |
Mch6g0991 | Mch-Chr6:6967593 | Mch6g0241 | Mch-Chr6:1588441 | 5.13E-67 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g0991 | K08908 | - | csv:101211430 | 499.204 |