Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0991 ATGGCCCTCTCCATTGCTTCCACTGCGCTCTCAGTCTCAACCCTCCCAATCAGAGAATCCCACACCAGACATTTTCCCGGAAAATTCACAAAACACCTCCGCCGAGACTATTCCCATTTGAACGCCGCCAAATCCGGCGTCTCCAGCGTCTGCGAACCGCTCCCTCCCGACAGACCTCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGTGATTTTGGCTTCGACCCCCTTGGATTGGGTTCTGATCCAGAGCTGCTGAAATGGTTCGCACAGGCGGAGCTGATGCACGCCAGATGGGCGATGCTGGCGGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAGAGCCTGGGATTGATCGAGAATTTCTCGTGGTACGACGCCGGAACCCGGGAATATTTCGCGGACCCGACGACGTTGTTGGTGGCGCAATTGGGTCTAATGGGGTGGGCGGAGGGGCGGCGGTGGGCGGACATGGTCAACCCGGGGAGCGTGGACGTTGACCTGAAACTGCCACACAAGAAGAAGCCGGCGCCGGACGTGGGCTACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTCATGGTGCTCCGTACCAAGGAGATTAAGAACGGCCGCCTCGCCATGCTGGCGTTCGTCGGACTGTGGTTTCAGGCCATTTATACCGGCCAAGGCCCGCTCGAGAATCTGGCGGCGCACCTCGCCGATCCCGGCCACTGCAACATTTTTTCGGCGTTTAGATCGGGTTGA 792 61.24 MALSIASTALSVSTLPIRESHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFSAFRSG 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6967593 6969287 - MC06g0841 Mch6g0991 690438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0991 263 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Mch6g0991 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 44 257 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Mch6g0991 263 SUPERFAMILY Chlorophyll a-b binding protein 57 260 - -
Mch6g0991 263 FunFam Chlorophyll a-b binding protein, chloroplastic 68 253 - -
Mch6g0991 263 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0991 Mch-Chr6:6967593 Mch9g2370 Mch-Chr9:23612786 2.10E-107 dispersed
Mch6g0991 Mch-Chr6:6967593 Mch6g0241 Mch-Chr6:1588441 5.13E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0991 K08908 - csv:101211430 499.204