Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1154 ATGTCTCGGAGATCGACTAGATTAGTGGAAAAAGCAACGGTACATTTAGAGAAGACCACCAGCAGTGAAATTGCAAAATCACTCAAGTTAAAGAGATGTGGTGGAACTGGGAAAATCCAGAATTCTTCCAGACGAAGGCAGAATTTGAAGCGGAAGAGTGGAAGTGATTCGAATGAAGTTCTGTTCTCTTCTGAGCAATTGGAGGGGAAGAAGAGGAAAACTTGTAGTCAGAGAGCAGTGGTCACAAGAGCAAGTGCTTCAAAGAATTTTGAGTATGAGGGGATCCACAAAGGGGGTGGGAGACCCAGGAAGAGGGTGTATTATCAGAAAGTGGTTTTTGATGGTGGTGAATTTGAGGTTGGGGAGGATGTTTATTTGAAGAGGAGAGAAGATGCGAGCTCCGACGACGAAGACCCTGAAGTTGAGGAGTGTAGAGTGTGTTTTAAGTCTGGAAAGGCTATAATGATCGAGTGTGATGATTGTCTTGGTGGCTTCCATTTGAAGTGTTTGAAGCCATCATTAAAGGAAGTTCCTGAGGGGGACTGGATATGTGGATTTTGTGAGGCTAATAAAATGGGCAAACAGGTTCAATTGCCGAAGCCTCCAGAGGGTAAAAAACGGGTTAGGACAATGAGGGAGAAGCTTCTGGCGGGTGACTTGTGGGCTGCTCACATTGAAAGTTTATGGAAAGATGTAGATGGTAACTATCGGTGTAAGGTTAGATGGTATATTATTCCAGAAGAGACAGCAGTTGGAAGACAACCGCATAACTTGAAGAGAGAGCTTTATTTAACTAATGATTATGCAGATATTGAGATGGAATCCATTCTTAGATTGTGTCAAGTCATGAATCCTAAAGACTATTATAATGCTAAGGAAGGGGATGATATCTTTGTATGTGAGTATGAATACGATGTTCGTTGGCATAGTTTCAAACGGTTAGCTGAAATTGATAAAGAAGAGGATGCTGAAGCCGTTGATAGCGACAAAGACTGGAAGTTGGACCAAGATGCAGAATCTGATTCAGATGGAGATGTGGAATATGATGAAGAGAGAGCACAAAGTTTACAATCTAGAATCTACTCAAGCTCGACCCATGAATTGGCTGCCAATTCAAAAAAAGGACAATTTCGTGGACTACAAAAGATAGGAGCAAAAAAGATCCCAGAGCATATAAGATGCCACAAACAGACTGAATTGGAAAGAGCAAAGGCAACCCTCATGTTGGCGTCATTACCCAAGTCTCTACCTTGTAGAAATAAAGAAATTGAGGAGATAACTACATTTATAGAAAGTGCTATATGTGATGATCAATGTTTGGGGCGTTGCTTGTACATCCATGGTGTTCCAGGAACAGGCAAGACAATGAGTGTAATGTCAGTAATGAGGAACTTGCGGGCTAAAGTTGATGCAGGAAATATAAGACCTCATTGCTTTGTGGAGGTTAATGGTCTAAAGCTGGCATCACCAGAAAATATATACAAGGTAATATATGAAGCATTAACTGGGCATAAGATTAATTGGAAGAAGGCTCTTCAGTTGTTGACTAAACGGTTTTCGGATGTAAATAGTTGCAAAGAGGATGCCCGTCCTTGTATTCTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAATCAGTCAGTTCTATACAACATTCTTGATTGGCCTACAAAGCCACAAGCCAAATTGATTGTGATAGGAATTGCAAACACCATGGACCTTCCTGAGAAGTTGCTTCCTCGAATTTCAAGCCGAATGGGTATTGAAAGGCTTTGCTTTGGCCCCTATAACTATCAGCAACTTCAAGAAATCATTTTGAGCCGCCTTGAAGGAAACAATGCATTTGAAAAACAAGCTATTGAATTTGCATCGAGAAAGGTAGCTGCTATTTCAGGAGACGCACGTCGTGCTCTAGAGATATGTAGGCGTGCAGCTGAAATTACTGATTACCATATAAAGTCACTGAGTTCGAGTCCCAACACTGATATGACTGCAAAAACACATGTAGGAATAACTGAGGTAGAAGCAGCGATTCGAGAAATGTTTCAAGCACCTCATATTCAAGTGATGAAGAATTGTCCTAAGCATAGTAAGATCTTCTTGACTGCTATGGTGCACGAACTTTATAAAACTGGAACGGGTGAAACTACCTTTGAAAAGCTTGCCATGGCTGTCTCGTGTCTTTGTACAAGCAATGGAGAGGAATTTCCAGGATATGATGCTCTCTTGAAAGTTGGCTGTAGGCTTGGTGAATGCAGAATTATTTTATGTGAATCAGGAGCCAAACATCGATTACAAAAATTGCAACTTAATTTTCCAAGCGATGATGTATCATTTGCACTGAAAGGCAGCAAGGATCTACCATGGTTGGACAAGTATCTATGA 2388 40.95 MSRRSTRLVEKATVHLEKTTSSEIAKSLKLKRCGGTGKIQNSSRRRQNLKRKSGSDSNEVLFSSEQLEGKKRKTCSQRAVVTRASASKNFEYEGIHKGGGRPRKRVYYQKVVFDGGEFEVGEDVYLKRREDASSDDEDPEVEECRVCFKSGKAIMIECDDCLGGFHLKCLKPSLKEVPEGDWICGFCEANKMGKQVQLPKPPEGKKRVRTMREKLLAGDLWAAHIESLWKDVDGNYRCKVRWYIIPEETAVGRQPHNLKRELYLTNDYADIEMESILRLCQVMNPKDYYNAKEGDDIFVCEYEYDVRWHSFKRLAEIDKEEDAEAVDSDKDWKLDQDAESDSDGDVEYDEERAQSLQSRIYSSSTHELAANSKKGQFRGLQKIGAKKIPEHIRCHKQTELERAKATLMLASLPKSLPCRNKEIEEITTFIESAICDDQCLGRCLYIHGVPGTGKTMSVMSVMRNLRAKVDAGNIRPHCFVEVNGLKLASPENIYKVIYEALTGHKINWKKALQLLTKRFSDVNSCKEDARPCILLIDELDLLVTRNQSVLYNILDWPTKPQAKLIVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYQQLQEIILSRLEGNNAFEKQAIEFASRKVAAISGDARRALEICRRAAEITDYHIKSLSSSPNTDMTAKTHVGITEVEAAIREMFQAPHIQVMKNCPKHSKIFLTAMVHELYKTGTGETTFEKLAMAVSCLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKGSKDLPWLDKYL 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8703362 8713913 - MC06g0975 Mch6g1154 690601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1154 795 MobiDBLite consensus disorder prediction 325 339 - -
Mch6g1154 795 SMART AAA_5 440 593 IPR003593 GO:0016887(InterPro)
Mch6g1154 795 Pfam CDC6, C terminal winged helix domain 690 781 IPR015163 -
Mch6g1154 795 Gene3D - 84 330 IPR043151 -
Mch6g1154 795 MobiDBLite consensus disorder prediction 325 349 - -
Mch6g1154 795 Pfam ATPase family associated with various cellular activities (AAA) 445 589 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Mch6g1154 795 SUPERFAMILY FYVE/PHD zinc finger 130 193 IPR011011 -
Mch6g1154 795 ProSiteProfiles Zinc finger PHD-type profile. 141 190 IPR019787 -
Mch6g1154 795 ProSiteProfiles BAH domain profile. 200 315 IPR001025 GO:0003682(InterPro)
Mch6g1154 795 Gene3D - 593 659 - -
Mch6g1154 795 MobiDBLite consensus disorder prediction 35 60 - -
Mch6g1154 795 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 194 791 IPR050311 GO:0003688(PANTHER)|GO:0005664(PANTHER)|GO:0006270(PANTHER)|GO:0033314(PANTHER)
Mch6g1154 795 SMART BAH_4 175 315 IPR001025 GO:0003682(InterPro)
Mch6g1154 795 FunFam Origin recognition complex subunit 1 592 684 - -
Mch6g1154 795 ProSitePatterns Zinc finger PHD-type signature. 144 187 IPR019786 -
Mch6g1154 795 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 208 IPR013083 -
Mch6g1154 795 FunFam Origin recognition complex subunit 1 397 595 - -
Mch6g1154 795 SMART PHD_3 143 188 IPR001965 -
Mch6g1154 795 Gene3D - 396 592 IPR027417 -
Mch6g1154 795 FunFam Origin recognition complex subunit 1 207 399 - -
Mch6g1154 795 Pfam PHD-finger 144 187 IPR019787 -
Mch6g1154 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 650 IPR027417 -
Mch6g1154 795 Pfam BAH domain 224 313 IPR001025 GO:0003682(InterPro)
Mch6g1154 795 Pfam AAA lid domain 617 652 IPR041083 -
Mch6g1154 795 FunFam Origin recognition complex subunit 1 139 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0781 Mch-Chr6:5416202 Mch6g1154 Mch-Chr6:8703362 3.95E-33 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43573 PF00004 AAA 6.30E-20 CL0023 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1154 K02603 - csv:101214082 1342.02