Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1194 ATGTTTCAAGACGAAGGCACATCCTCCGTAACTTCCTCCCCTCTCCAGTTCTTCACTATGATGTCTCTTTCACCTAAATTGGGTTCTCCATATCCATGGCTTAGAGAGCTCAAATCTGAGGAGAGGGGCTTGTATCTGATCCATTTGTTGCTTACTTGTGCAAATCATGTGGCTGTTGGTAGCCTTGACAGTGCCAATCTTGCCCTTGATCAAATATCCCATCTTGCTTCTGCAAATGGTGACACAATGCAGCGGATTGCAGCTTATTTCGCCGAGGCTCTCGCAGATCGAATCCTCAAAACTTGGCCCGGTCTTTACAAGGCCTTCAACTCCACCAAGATGCCAATGGTTTCAGAGGAGATTATTGTTAAGAAACTGTTCTTTGAAATGTTTCCATTCCTCAAGGTGGCTTTTGTGCTTACTAATCAGGCTATTGTTGAAGCCATGGAGGGGGAAAAGATGATACATATAATTGATCTCAATGCCAATGAAACTGCTCAGTGGCTTGCACTTCTGCAAGTTTTGAGTGCCAGGCCTGAAGGACCTCCCCATTTGAGAATCACTGGGGTTCATCCACAGAAAGAGGTTCTGGATCAAATGGCTCGTAGGCTGACCGAGGAAGCCGAAAAATTGGATATCCCGTTTCAATTCAATTCTGTTGTCAGCAGATTGGAGAACCTTGATATGGAAAAGCTTCGAGTGAAAACCGGGGAGGCTCTCGCTATCAACTCGGTTCTTCAGTTGCACGCCCTTCTGGCCTATGATAATGAAGTCCCACAAAAACCATCTCCTTCAGCATCAAAGGGTGCAAATGGAGTTCAGTACTCGAGATACCCGCATCTGAACCAAACCACCTTGAGTGAGTTACTCGAAAAGGATTTGGTTAATGGTTGCAGTCCAAGTTCAGACTCAGTTTCCTCATCAGCACTATCTCAAGCAAACGTGACGAAGATCGATAGCTTTCTGAATGGATTGTGGGGTTTGACGCCAAAGGTGATGGTTGTAACCGAACAAGATTCGAACCACAATGGTTCAACACTTATGGAGAGATTACTAGAGGCTCTCCACACATACGCAGCTGTTTTTGATTGTCTGGAATCGAACATGTCAAGAACATCCCTGGAAAGGTTGAAGTTAGAAAAGATGCTATTTGGGGAAGAGATTAAGAACATAGTAGCTTGTGAGGGAGCTGAGAGGAAGGAACGACACGAAAAGCGCGAGAAATGGAGTCAACGGTTGGATCTCGCAGGGTTCAGGCATGTGTCTTTGAGTTATTACGGCATGCTGCAGGCACGGAGCCTGCTACAAGGGTATGGTTGTGATGGTTATAGGATGAAGGAAGAGAATGGTTGTGTGATGATATGTTGGCAAGATCGACCGCTGTTCTCGGTATCGGCTTGGAGGTGTTGTAAG 1413 45.79 MFQDEGTSSVTSSPLQFFTMMSLSPKLGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLDSANLALDQISHLASANGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKMPMVSEEIIVKKLFFEMFPFLKVAFVLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQVLSARPEGPPHLRITGVHPQKEVLDQMARRLTEEAEKLDIPFQFNSVVSRLENLDMEKLRVKTGEALAINSVLQLHALLAYDNEVPQKPSPSASKGANGVQYSRYPHLNQTTLSELLEKDLVNGCSPSSDSVSSSALSQANVTKIDSFLNGLWGLTPKVMVVTEQDSNHNGSTLMERLLEALHTYAAVFDCLESNMSRTSLERLKLEKMLFGEEIKNIVACEGAERKERHEKREKWSQRLDLAGFRHVSLSYYGMLQARSLLQGYGCDGYRMKEENGCVMICWQDRPLFSVSAWRCCK 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9168183 9169595 - MC06g1005 Mch6g1194 690641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1194 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Mch6g1194 471 Pfam GRAS domain family 46 468 IPR005202 -
Mch6g1194 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 467 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009739(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1194 Mch-Chr6:9168183 Mch9g1760 Mch-Chr9:19542119 9.99E-210 dispersed
Mch6g1194 Mch-Chr6:9168183 Mch1g1496 Mch-Chr1:16458092 6.29E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43576 PF03514 GRAS 3.60E-142 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1194 - - - 0.0